Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.

Detalhes bibliográficos
Autor(a) principal: LEAO, A. P.
Data de Publicação: 2022
Outros Autores: BITTENCOURT, C. B., SILVA, T. L. C. da, RODRIGUES NETO, J. C., BRAGA, I. de O., VIEIRA, L. R., RIBEIRO, J. A. de A., SOUSA, C. A. F. de, ABDELNUR, P. V., SOUZA JUNIOR, M. T.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1148001
https:// doi.org/10.3390/plants11202786
Resumo: Drought and salinity are two of the most severe abiotic stresses affecting agriculture worldwide and bear some similarities regarding the responses of plants to them. The first is also known as osmotic stress and shows similarities mainly with the osmotic effect, the first phase of salinity stress. Multi-Omics Integration (MOI) offers a new opportunity for the non-trivial challenge of unraveling the mechanisms behind multigenic traits, such as drought and salinity resistance. The current study carried out a comprehensive, large-scale, single-omics analysis (SOA) and MOI studies on the leaves of young oil palm plants submitted to water deprivation. After performing SOA, 1955 DE enzymes from transcriptomics analysis, 131 DE enzymes from proteomics analysis, and 269 DE metabolites underwent MOI analysis, revealing several pathways affected by this stress, with at least one DE molecule in all three omics platforms used. Moreover, the similarities and dissimilarities in the molecular response of those plants to those two abiotic stresses underwent mapping. Cysteine and methionine metabolism (map00270) was the most affected pathway in all scenarios evaluated. The correlation analysis revealed that 91.55% of those enzymes expressed under both stresses had similar qualitative profiles, corroborating the already known fact that plant responses to drought and salinity show several similarities. At last, the results shed light on some candidate genes for engineering crop species resilient to both abiotic stresses.
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spelling Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.African oil palmIntegratomicsTranscriptomicsProteomicsMetabolomicsAbiotic stressDrought and salinity are two of the most severe abiotic stresses affecting agriculture worldwide and bear some similarities regarding the responses of plants to them. The first is also known as osmotic stress and shows similarities mainly with the osmotic effect, the first phase of salinity stress. Multi-Omics Integration (MOI) offers a new opportunity for the non-trivial challenge of unraveling the mechanisms behind multigenic traits, such as drought and salinity resistance. The current study carried out a comprehensive, large-scale, single-omics analysis (SOA) and MOI studies on the leaves of young oil palm plants submitted to water deprivation. After performing SOA, 1955 DE enzymes from transcriptomics analysis, 131 DE enzymes from proteomics analysis, and 269 DE metabolites underwent MOI analysis, revealing several pathways affected by this stress, with at least one DE molecule in all three omics platforms used. Moreover, the similarities and dissimilarities in the molecular response of those plants to those two abiotic stresses underwent mapping. Cysteine and methionine metabolism (map00270) was the most affected pathway in all scenarios evaluated. The correlation analysis revealed that 91.55% of those enzymes expressed under both stresses had similar qualitative profiles, corroborating the already known fact that plant responses to drought and salinity show several similarities. At last, the results shed light on some candidate genes for engineering crop species resilient to both abiotic stresses.ANDRE PEREIRA LEAO, CNPAE; CLEITON BARROSO BITTENCOURT, Universidade Federal de Lavras; THALLITON LUIZ CARVALHO DA SILVA, Universidade Federal de Lavras; JORGE CÂNDIDO RODRIGUES NETO; ÍTALO DE OLIVEIRA BRAGA, Universidade Federal de Lavras; LETÍCIA RIOS VIEIRA, Universidade Federal de Lavras; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; PATRICIA VERARDI ABDELNUR, CNPAE; MANOEL TEIXEIRA SOUZA JUNIOR, CNPAE.LEAO, A. P.BITTENCOURT, C. B.SILVA, T. L. C. daRODRIGUES NETO, J. C.BRAGA, I. de O.VIEIRA, L. R.RIBEIRO, J. A. de A.SOUSA, C. A. F. deABDELNUR, P. V.SOUZA JUNIOR, M. T.2022-11-03T18:08:19Z2022-11-03T18:08:19Z2022-11-032022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlants, 11, n. 2786, 2022.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1148001https:// doi.org/10.3390/plants11202786enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-11-03T18:08:28Zoai:www.alice.cnptia.embrapa.br:doc/1148001Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-11-03T18:08:28falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-11-03T18:08:28Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
title Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
spellingShingle Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
LEAO, A. P.
African oil palm
Integratomics
Transcriptomics
Proteomics
Metabolomics
Abiotic stress
title_short Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
title_full Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
title_fullStr Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
title_full_unstemmed Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
title_sort Insights from a Multi-Omics Integration (MOI) Study in Oil Palm (Elaeis gineensis Jacq.) Response to Abiotic Stresses: Part Two - Drought.
author LEAO, A. P.
author_facet LEAO, A. P.
BITTENCOURT, C. B.
SILVA, T. L. C. da
RODRIGUES NETO, J. C.
BRAGA, I. de O.
VIEIRA, L. R.
RIBEIRO, J. A. de A.
SOUSA, C. A. F. de
ABDELNUR, P. V.
SOUZA JUNIOR, M. T.
author_role author
author2 BITTENCOURT, C. B.
SILVA, T. L. C. da
RODRIGUES NETO, J. C.
BRAGA, I. de O.
VIEIRA, L. R.
RIBEIRO, J. A. de A.
SOUSA, C. A. F. de
ABDELNUR, P. V.
SOUZA JUNIOR, M. T.
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ANDRE PEREIRA LEAO, CNPAE; CLEITON BARROSO BITTENCOURT, Universidade Federal de Lavras; THALLITON LUIZ CARVALHO DA SILVA, Universidade Federal de Lavras; JORGE CÂNDIDO RODRIGUES NETO; ÍTALO DE OLIVEIRA BRAGA, Universidade Federal de Lavras; LETÍCIA RIOS VIEIRA, Universidade Federal de Lavras; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; PATRICIA VERARDI ABDELNUR, CNPAE; MANOEL TEIXEIRA SOUZA JUNIOR, CNPAE.
dc.contributor.author.fl_str_mv LEAO, A. P.
BITTENCOURT, C. B.
SILVA, T. L. C. da
RODRIGUES NETO, J. C.
BRAGA, I. de O.
VIEIRA, L. R.
RIBEIRO, J. A. de A.
SOUSA, C. A. F. de
ABDELNUR, P. V.
SOUZA JUNIOR, M. T.
dc.subject.por.fl_str_mv African oil palm
Integratomics
Transcriptomics
Proteomics
Metabolomics
Abiotic stress
topic African oil palm
Integratomics
Transcriptomics
Proteomics
Metabolomics
Abiotic stress
description Drought and salinity are two of the most severe abiotic stresses affecting agriculture worldwide and bear some similarities regarding the responses of plants to them. The first is also known as osmotic stress and shows similarities mainly with the osmotic effect, the first phase of salinity stress. Multi-Omics Integration (MOI) offers a new opportunity for the non-trivial challenge of unraveling the mechanisms behind multigenic traits, such as drought and salinity resistance. The current study carried out a comprehensive, large-scale, single-omics analysis (SOA) and MOI studies on the leaves of young oil palm plants submitted to water deprivation. After performing SOA, 1955 DE enzymes from transcriptomics analysis, 131 DE enzymes from proteomics analysis, and 269 DE metabolites underwent MOI analysis, revealing several pathways affected by this stress, with at least one DE molecule in all three omics platforms used. Moreover, the similarities and dissimilarities in the molecular response of those plants to those two abiotic stresses underwent mapping. Cysteine and methionine metabolism (map00270) was the most affected pathway in all scenarios evaluated. The correlation analysis revealed that 91.55% of those enzymes expressed under both stresses had similar qualitative profiles, corroborating the already known fact that plant responses to drought and salinity show several similarities. At last, the results shed light on some candidate genes for engineering crop species resilient to both abiotic stresses.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-03T18:08:19Z
2022-11-03T18:08:19Z
2022-11-03
2022
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plants, 11, n. 2786, 2022.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1148001
https:// doi.org/10.3390/plants11202786
identifier_str_mv Plants, 11, n. 2786, 2022.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1148001
https:// doi.org/10.3390/plants11202786
dc.language.iso.fl_str_mv eng
language eng
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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