Marker-assited screening of cotton cultivars for bacterial blight resistance gene.

Detalhes bibliográficos
Autor(a) principal: FAUSTINE, C.
Data de Publicação: 2015
Outros Autores: HOFFMANN, L. V., LUKONGE, E., TIBAZARWA, F. I.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041528
Resumo: Bacterial blight or leaf blight is a common disease of cotton in almost all cotton growing countries, including Tanzania. Bacterial blight is caused by infection of plants with the bacteria (Xanthomonas axonopodis pv. malvacearum) and the use of resistant cultivars is the most effective long-term strategy to manage the disease. The strategy starts with identification of resistant individuals, which can be identified either phenotypically by inoculation or by use of molecular markers linked to genes that confer resistance. The B12 gene is known to confer a high level of resistance to all Xanthomonas axonopodis pv. malvacearum races found in USA and Africa. Four Brazilian and three local cultivars were screened for the presence of SSR (CIR246) and SNP NG0207155 markers linked to B12. The SNP marker showed the greatest frequency of resistance-linked alleles in the cultivar UK08 (85.71%) followed by UK91 (75%),UKM08 and Ipê (25%), Araça(8.33%),Aroeira (7.1%) and the least in Cedro (0%). Comparable results were recorded for SSR marker where the cultivar UK08 presented relatively higher frequency of resistance alleles (85.71%) of samples tested followed by UK91 (68.75%), UKM08 (25%), Ipê, Aroeira and Araça (8%) and the last was Cedro (0%). The results suggest the potential utility of Tanzanian germplasm in breeding for resistance to Xanthomonas axonopodis pv. malvacearum race 18 and the need to purify the same germplasm by marker assisted selection.
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spelling Marker-assited screening of cotton cultivars for bacterial blight resistance gene.Bacterial blightXanthomonas axonopodis pv malvacearumMolecular markerGeneBactériaAlgodãoGermoplasmacottonBacterial blight or leaf blight is a common disease of cotton in almost all cotton growing countries, including Tanzania. Bacterial blight is caused by infection of plants with the bacteria (Xanthomonas axonopodis pv. malvacearum) and the use of resistant cultivars is the most effective long-term strategy to manage the disease. The strategy starts with identification of resistant individuals, which can be identified either phenotypically by inoculation or by use of molecular markers linked to genes that confer resistance. The B12 gene is known to confer a high level of resistance to all Xanthomonas axonopodis pv. malvacearum races found in USA and Africa. Four Brazilian and three local cultivars were screened for the presence of SSR (CIR246) and SNP NG0207155 markers linked to B12. The SNP marker showed the greatest frequency of resistance-linked alleles in the cultivar UK08 (85.71%) followed by UK91 (75%),UKM08 and Ipê (25%), Araça(8.33%),Aroeira (7.1%) and the least in Cedro (0%). Comparable results were recorded for SSR marker where the cultivar UK08 presented relatively higher frequency of resistance alleles (85.71%) of samples tested followed by UK91 (68.75%), UKM08 (25%), Ipê, Aroeira and Araça (8%) and the last was Cedro (0%). The results suggest the potential utility of Tanzanian germplasm in breeding for resistance to Xanthomonas axonopodis pv. malvacearum race 18 and the need to purify the same germplasm by marker assisted selection.CHRISTOPHER FAUSTINE, THE OPEN UNIVERSITY OF TANZANIA; LUCIA VIEIRA HOFFMANN, CNPA; EVERINA LUKONGE, UKIRIGURU AGRICULTURAL RESEARCH INSTITUTE; FLORA ISMAIL TIBAZARWA, UNIVERSITY OF DAR ES SALAAM - TANZANIA.FAUSTINE, C.HOFFMANN, L. V.LUKONGE, E.TIBAZARWA, F. I.2016-03-21T11:11:11Z2016-03-21T11:11:11Z2016-03-2120152016-03-24T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleHURIA Journal of The Open University of Tanzania, Dar es Salaam, v. 19., n. 1, P. 1-7, Feb. 2015.0856-6739http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041528enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:01:40Zoai:www.alice.cnptia.embrapa.br:doc/1041528Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:01:40falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:01:40Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
title Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
spellingShingle Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
FAUSTINE, C.
Bacterial blight
Xanthomonas axonopodis pv malvacearum
Molecular marker
Gene
Bactéria
Algodão
Germoplasma
cotton
title_short Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
title_full Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
title_fullStr Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
title_full_unstemmed Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
title_sort Marker-assited screening of cotton cultivars for bacterial blight resistance gene.
author FAUSTINE, C.
author_facet FAUSTINE, C.
HOFFMANN, L. V.
LUKONGE, E.
TIBAZARWA, F. I.
author_role author
author2 HOFFMANN, L. V.
LUKONGE, E.
TIBAZARWA, F. I.
author2_role author
author
author
dc.contributor.none.fl_str_mv CHRISTOPHER FAUSTINE, THE OPEN UNIVERSITY OF TANZANIA; LUCIA VIEIRA HOFFMANN, CNPA; EVERINA LUKONGE, UKIRIGURU AGRICULTURAL RESEARCH INSTITUTE; FLORA ISMAIL TIBAZARWA, UNIVERSITY OF DAR ES SALAAM - TANZANIA.
dc.contributor.author.fl_str_mv FAUSTINE, C.
HOFFMANN, L. V.
LUKONGE, E.
TIBAZARWA, F. I.
dc.subject.por.fl_str_mv Bacterial blight
Xanthomonas axonopodis pv malvacearum
Molecular marker
Gene
Bactéria
Algodão
Germoplasma
cotton
topic Bacterial blight
Xanthomonas axonopodis pv malvacearum
Molecular marker
Gene
Bactéria
Algodão
Germoplasma
cotton
description Bacterial blight or leaf blight is a common disease of cotton in almost all cotton growing countries, including Tanzania. Bacterial blight is caused by infection of plants with the bacteria (Xanthomonas axonopodis pv. malvacearum) and the use of resistant cultivars is the most effective long-term strategy to manage the disease. The strategy starts with identification of resistant individuals, which can be identified either phenotypically by inoculation or by use of molecular markers linked to genes that confer resistance. The B12 gene is known to confer a high level of resistance to all Xanthomonas axonopodis pv. malvacearum races found in USA and Africa. Four Brazilian and three local cultivars were screened for the presence of SSR (CIR246) and SNP NG0207155 markers linked to B12. The SNP marker showed the greatest frequency of resistance-linked alleles in the cultivar UK08 (85.71%) followed by UK91 (75%),UKM08 and Ipê (25%), Araça(8.33%),Aroeira (7.1%) and the least in Cedro (0%). Comparable results were recorded for SSR marker where the cultivar UK08 presented relatively higher frequency of resistance alleles (85.71%) of samples tested followed by UK91 (68.75%), UKM08 (25%), Ipê, Aroeira and Araça (8%) and the last was Cedro (0%). The results suggest the potential utility of Tanzanian germplasm in breeding for resistance to Xanthomonas axonopodis pv. malvacearum race 18 and the need to purify the same germplasm by marker assisted selection.
publishDate 2015
dc.date.none.fl_str_mv 2015
2016-03-21T11:11:11Z
2016-03-21T11:11:11Z
2016-03-21
2016-03-24T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv HURIA Journal of The Open University of Tanzania, Dar es Salaam, v. 19., n. 1, P. 1-7, Feb. 2015.
0856-6739
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041528
identifier_str_mv HURIA Journal of The Open University of Tanzania, Dar es Salaam, v. 19., n. 1, P. 1-7, Feb. 2015.
0856-6739
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1041528
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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