Impact of plant domestication on rhizosphere microbiome assembly and functions.
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1042651 |
Resumo: | Abstract: The rhizosphere microbiome is pivotal for plant health and growth, providing defence against pests and diseases, facilitating nutrient acquisition and helping plants to withstand abiotic stresses. Plants can actively recruit members of the soil microbial community for positive feedbacks, but the underlying mechanisms and plant traits that drive microbiome assembly and functions are largely unknown. Domestication of plant species has substantially contributed to human civilization, but also caused a strong decrease in the genetic diversity of modern crop cultivars that may have affected the ability of plants to establish beneficial associations with rhizosphere microbes. Here, we review how plants shape the rhizosphere microbiome and how domestication may have impacted rhizosphere microbiome assembly and functions via habitat expansion and via changes in crop management practices, root exudation, root architecture, and plant litter quality. We also propose a ?back to the roots? framework that comprises the exploration of the microbiome of indigenous plants and their native habitats for the identification of plant and microbial traits with the ultimate goal to reinstate beneficial associations that may have been undermined during plant domestication. |
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Impact of plant domestication on rhizosphere microbiome assembly and functions.Rhizosphere microbiomePlant domesticationPlant-microbe interactionsRizosferaBactériaRhizosphere bacteriaMicrobiomeCropsDomesticationwild relativesAbstract: The rhizosphere microbiome is pivotal for plant health and growth, providing defence against pests and diseases, facilitating nutrient acquisition and helping plants to withstand abiotic stresses. Plants can actively recruit members of the soil microbial community for positive feedbacks, but the underlying mechanisms and plant traits that drive microbiome assembly and functions are largely unknown. Domestication of plant species has substantially contributed to human civilization, but also caused a strong decrease in the genetic diversity of modern crop cultivars that may have affected the ability of plants to establish beneficial associations with rhizosphere microbes. Here, we review how plants shape the rhizosphere microbiome and how domestication may have impacted rhizosphere microbiome assembly and functions via habitat expansion and via changes in crop management practices, root exudation, root architecture, and plant litter quality. We also propose a ?back to the roots? framework that comprises the exploration of the microbiome of indigenous plants and their native habitats for the identification of plant and microbial traits with the ultimate goal to reinstate beneficial associations that may have been undermined during plant domestication.JUAN ESTEBAN PEREZ-JARAMILLO, Netherlands Institute of Ecology; RODRIGO MENDES, CNPMA; JOS M RAAIJMAKERS, Netherlands Institute of Ecology.PÉREZ-JARAMILLO, J. E.MENDES, R.RAAIJMAKERS, J. M.2016-04-05T11:11:11Z2016-04-05T11:11:11Z2016-04-0520162016-04-07T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlant Molecular Biology, The Hague, v. 90, n. 6, p. 635-644, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1042651enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:23:23Zoai:www.alice.cnptia.embrapa.br:doc/1042651Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:23:23falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:23:23Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
title |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
spellingShingle |
Impact of plant domestication on rhizosphere microbiome assembly and functions. PÉREZ-JARAMILLO, J. E. Rhizosphere microbiome Plant domestication Plant-microbe interactions Rizosfera Bactéria Rhizosphere bacteria Microbiome Crops Domestication wild relatives |
title_short |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
title_full |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
title_fullStr |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
title_full_unstemmed |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
title_sort |
Impact of plant domestication on rhizosphere microbiome assembly and functions. |
author |
PÉREZ-JARAMILLO, J. E. |
author_facet |
PÉREZ-JARAMILLO, J. E. MENDES, R. RAAIJMAKERS, J. M. |
author_role |
author |
author2 |
MENDES, R. RAAIJMAKERS, J. M. |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
JUAN ESTEBAN PEREZ-JARAMILLO, Netherlands Institute of Ecology; RODRIGO MENDES, CNPMA; JOS M RAAIJMAKERS, Netherlands Institute of Ecology. |
dc.contributor.author.fl_str_mv |
PÉREZ-JARAMILLO, J. E. MENDES, R. RAAIJMAKERS, J. M. |
dc.subject.por.fl_str_mv |
Rhizosphere microbiome Plant domestication Plant-microbe interactions Rizosfera Bactéria Rhizosphere bacteria Microbiome Crops Domestication wild relatives |
topic |
Rhizosphere microbiome Plant domestication Plant-microbe interactions Rizosfera Bactéria Rhizosphere bacteria Microbiome Crops Domestication wild relatives |
description |
Abstract: The rhizosphere microbiome is pivotal for plant health and growth, providing defence against pests and diseases, facilitating nutrient acquisition and helping plants to withstand abiotic stresses. Plants can actively recruit members of the soil microbial community for positive feedbacks, but the underlying mechanisms and plant traits that drive microbiome assembly and functions are largely unknown. Domestication of plant species has substantially contributed to human civilization, but also caused a strong decrease in the genetic diversity of modern crop cultivars that may have affected the ability of plants to establish beneficial associations with rhizosphere microbes. Here, we review how plants shape the rhizosphere microbiome and how domestication may have impacted rhizosphere microbiome assembly and functions via habitat expansion and via changes in crop management practices, root exudation, root architecture, and plant litter quality. We also propose a ?back to the roots? framework that comprises the exploration of the microbiome of indigenous plants and their native habitats for the identification of plant and microbial traits with the ultimate goal to reinstate beneficial associations that may have been undermined during plant domestication. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-04-05T11:11:11Z 2016-04-05T11:11:11Z 2016-04-05 2016 2016-04-07T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Plant Molecular Biology, The Hague, v. 90, n. 6, p. 635-644, 2016. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1042651 |
identifier_str_mv |
Plant Molecular Biology, The Hague, v. 90, n. 6, p. 635-644, 2016. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1042651 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503420626862080 |