Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).
Autor(a) principal: | |
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Data de Publicação: | 2010 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333 |
Resumo: | We identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs. |
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Development of microsatellite markers for Hoplias malabaricus (Erythrinidae).MicrossatéliteCerradoTrairaHoplias malabaricusMarcador molecularWe identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs.S. G. C. A. GONDIM, UFG; L. V. RESENDE, UFG; ROSANA PEREIRA VIANELLO BRONDANI, CNPAF; R. G. COLLEVATTI, UFG; N. J. SILVA-JÚNIOR, SYSTEMA NATURAE CONSULTORIA AMBIENTAL, Goiânia; R. R. PEREIRA, UFG; M. P. C. TELLES, UFG.GONDIM, S. G. C. A.RESENDE, L. V.BRONDANI, R. P. V.COLLEVATTI, R. G.SILVA-JÚNIOR, N. J.PEREIRA, R. R.TELLES, M. P. C.2021-01-10T09:03:47Z2021-01-10T09:03:47Z2010-09-152010info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010.http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-01-10T09:03:53Zoai:www.alice.cnptia.embrapa.br:doc/862333Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-01-10T09:03:53falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-01-10T09:03:53Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
title |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
spellingShingle |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). GONDIM, S. G. C. A. Microssatélite Cerrado Traira Hoplias malabaricus Marcador molecular |
title_short |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
title_full |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
title_fullStr |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
title_full_unstemmed |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
title_sort |
Development of microsatellite markers for Hoplias malabaricus (Erythrinidae). |
author |
GONDIM, S. G. C. A. |
author_facet |
GONDIM, S. G. C. A. RESENDE, L. V. BRONDANI, R. P. V. COLLEVATTI, R. G. SILVA-JÚNIOR, N. J. PEREIRA, R. R. TELLES, M. P. C. |
author_role |
author |
author2 |
RESENDE, L. V. BRONDANI, R. P. V. COLLEVATTI, R. G. SILVA-JÚNIOR, N. J. PEREIRA, R. R. TELLES, M. P. C. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
S. G. C. A. GONDIM, UFG; L. V. RESENDE, UFG; ROSANA PEREIRA VIANELLO BRONDANI, CNPAF; R. G. COLLEVATTI, UFG; N. J. SILVA-JÚNIOR, SYSTEMA NATURAE CONSULTORIA AMBIENTAL, Goiânia; R. R. PEREIRA, UFG; M. P. C. TELLES, UFG. |
dc.contributor.author.fl_str_mv |
GONDIM, S. G. C. A. RESENDE, L. V. BRONDANI, R. P. V. COLLEVATTI, R. G. SILVA-JÚNIOR, N. J. PEREIRA, R. R. TELLES, M. P. C. |
dc.subject.por.fl_str_mv |
Microssatélite Cerrado Traira Hoplias malabaricus Marcador molecular |
topic |
Microssatélite Cerrado Traira Hoplias malabaricus Marcador molecular |
description |
We identified 14 microsatellite loci for the wolf fish, Hoplias malabaricus (Erythrinidae), from a genomic shotgun library. Twenty-five primers were designed, and 48 individuals of H. malabaricus from four localities of northwest Goiás, in central Brazil, were genotyped to characterize the polymorphism at each locus. Fourteen primers amplified clearly interpretable products using a single PCR protocol; six loci were polymorphic, but with a low number of alleles per locus (2 or 3). Expected heterozygosities for polymorphic loci ranged from 0.136 to 0.505. Combined paternity exclusion probability (0.638) was low and combined genetic identity (0.056) was high in studies of parentage. The low polymorphism may be due to the small microsatellite size and the large size of the motifs. |
publishDate |
2010 |
dc.date.none.fl_str_mv |
2010-09-15 2010 2021-01-10T09:03:47Z 2021-01-10T09:03:47Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010. http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333 |
identifier_str_mv |
Genetics and Molecular Research, v. 9, n. 3, p. 1513-1517, 2010. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/862333 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503500777914368 |