Differential transcriptional profiles of dormancy-related genes in apple buds

Detalhes bibliográficos
Autor(a) principal: FALAVIGNA, V. da S.
Data de Publicação: 2014
Outros Autores: PORTO, D. D., BUFFON, V., MARGIS-PINHEIRO, M., PASQUALI, G., REVERS, L. F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/993551
Resumo: The production of temperate fruit crops depends on plant developmental processes, primarily the shift from the juvenile phase to the reproductive phase, dormancy transitions and flowering. Apple tree (Malus ×domestica Borkh.) development is regulated by chilling temperatures, which are required for bud dormancy progression. The apple cultivar Castel Gala is a spontaneous mutation of "Gala Standard". "Castel Gala" is characterized by a 50 % decrease in the chilling requirement (CR) for dormancy release, which results in an earlier budbreak. This work explores the contrasting phenotypes of these cultivars using suppression subtractive hybridization (SSH). From 1,019 unigenes identified by SSH, we selected 28 candidate genes putatively associated with dormancy cycling. Reverse transcription-quantitative polymerase chain reaction was used to validate the differential expression profiles and to transcriptionally characterize these genes in three distinct apple cultivars ("Castel Gala", "Royal Gala" and "Fuji Standard") during a cycle comprising growth to dormancy. Of the 28 candidate genes analyzed, 17 confirmed the differences in expression predicted by SSH. Seasonal transcript accumulation during the winter was observed for several genes, with higher steady-state mRNA levels maintained longer in cultivars with a high CR. The transcription profiles suggest that these genes may be associated with dormancy establishment and maintenance. Of the 17 candidate genes, transcripts coding for dormancy-associated MADS-box (DAM), dehydrins, GAST1, LTI65, NAC, HTA8, HTA12 and RAP2.12-like proteins displayed major differences in gene expression between cultivars through the winter. These genes were therefore considered good candidates for key roles in the dormancy process in apple trees.
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spelling Differential transcriptional profiles of dormancy-related genes in apple budsCastel GalaFuji StandardRoyal GalaAppleMaçãTemperaturaDormenciaGenetica vegetalThe production of temperate fruit crops depends on plant developmental processes, primarily the shift from the juvenile phase to the reproductive phase, dormancy transitions and flowering. Apple tree (Malus ×domestica Borkh.) development is regulated by chilling temperatures, which are required for bud dormancy progression. The apple cultivar Castel Gala is a spontaneous mutation of "Gala Standard". "Castel Gala" is characterized by a 50 % decrease in the chilling requirement (CR) for dormancy release, which results in an earlier budbreak. This work explores the contrasting phenotypes of these cultivars using suppression subtractive hybridization (SSH). From 1,019 unigenes identified by SSH, we selected 28 candidate genes putatively associated with dormancy cycling. Reverse transcription-quantitative polymerase chain reaction was used to validate the differential expression profiles and to transcriptionally characterize these genes in three distinct apple cultivars ("Castel Gala", "Royal Gala" and "Fuji Standard") during a cycle comprising growth to dormancy. Of the 28 candidate genes analyzed, 17 confirmed the differences in expression predicted by SSH. Seasonal transcript accumulation during the winter was observed for several genes, with higher steady-state mRNA levels maintained longer in cultivars with a high CR. The transcription profiles suggest that these genes may be associated with dormancy establishment and maintenance. Of the 17 candidate genes, transcripts coding for dormancy-associated MADS-box (DAM), dehydrins, GAST1, LTI65, NAC, HTA8, HTA12 and RAP2.12-like proteins displayed major differences in gene expression between cultivars through the winter. These genes were therefore considered good candidates for key roles in the dormancy process in apple trees.DOI 10.1007/s11105-013-0690-0Vítor da Silveira Falavigna; Diogo Denardi Porto, CNPUV; Vanessa Buffon, CNPUV; Márcia Margis-Pinheiro; Giancarlo Pasquali; LUIS FERNANDO REVERS, CNPUV.FALAVIGNA, V. da S.PORTO, D. D.BUFFON, V.MARGIS-PINHEIRO, M.PASQUALI, G.REVERS, L. F.2016-02-22T12:38:15Z2016-02-22T12:38:15Z2014-08-2720142019-04-02T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlant Molecular Biology Reporter, v. 32, p. 796-813, 2014.http://www.alice.cnptia.embrapa.br/alice/handle/doc/993551enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:45:25Zoai:www.alice.cnptia.embrapa.br:doc/993551Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T03:45:25falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:45:25Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Differential transcriptional profiles of dormancy-related genes in apple buds
title Differential transcriptional profiles of dormancy-related genes in apple buds
spellingShingle Differential transcriptional profiles of dormancy-related genes in apple buds
FALAVIGNA, V. da S.
Castel Gala
Fuji Standard
Royal Gala
Apple
Maçã
Temperatura
Dormencia
Genetica vegetal
title_short Differential transcriptional profiles of dormancy-related genes in apple buds
title_full Differential transcriptional profiles of dormancy-related genes in apple buds
title_fullStr Differential transcriptional profiles of dormancy-related genes in apple buds
title_full_unstemmed Differential transcriptional profiles of dormancy-related genes in apple buds
title_sort Differential transcriptional profiles of dormancy-related genes in apple buds
author FALAVIGNA, V. da S.
author_facet FALAVIGNA, V. da S.
PORTO, D. D.
BUFFON, V.
MARGIS-PINHEIRO, M.
PASQUALI, G.
REVERS, L. F.
author_role author
author2 PORTO, D. D.
BUFFON, V.
MARGIS-PINHEIRO, M.
PASQUALI, G.
REVERS, L. F.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Vítor da Silveira Falavigna; Diogo Denardi Porto, CNPUV; Vanessa Buffon, CNPUV; Márcia Margis-Pinheiro; Giancarlo Pasquali; LUIS FERNANDO REVERS, CNPUV.
dc.contributor.author.fl_str_mv FALAVIGNA, V. da S.
PORTO, D. D.
BUFFON, V.
MARGIS-PINHEIRO, M.
PASQUALI, G.
REVERS, L. F.
dc.subject.por.fl_str_mv Castel Gala
Fuji Standard
Royal Gala
Apple
Maçã
Temperatura
Dormencia
Genetica vegetal
topic Castel Gala
Fuji Standard
Royal Gala
Apple
Maçã
Temperatura
Dormencia
Genetica vegetal
description The production of temperate fruit crops depends on plant developmental processes, primarily the shift from the juvenile phase to the reproductive phase, dormancy transitions and flowering. Apple tree (Malus ×domestica Borkh.) development is regulated by chilling temperatures, which are required for bud dormancy progression. The apple cultivar Castel Gala is a spontaneous mutation of "Gala Standard". "Castel Gala" is characterized by a 50 % decrease in the chilling requirement (CR) for dormancy release, which results in an earlier budbreak. This work explores the contrasting phenotypes of these cultivars using suppression subtractive hybridization (SSH). From 1,019 unigenes identified by SSH, we selected 28 candidate genes putatively associated with dormancy cycling. Reverse transcription-quantitative polymerase chain reaction was used to validate the differential expression profiles and to transcriptionally characterize these genes in three distinct apple cultivars ("Castel Gala", "Royal Gala" and "Fuji Standard") during a cycle comprising growth to dormancy. Of the 28 candidate genes analyzed, 17 confirmed the differences in expression predicted by SSH. Seasonal transcript accumulation during the winter was observed for several genes, with higher steady-state mRNA levels maintained longer in cultivars with a high CR. The transcription profiles suggest that these genes may be associated with dormancy establishment and maintenance. Of the 17 candidate genes, transcripts coding for dormancy-associated MADS-box (DAM), dehydrins, GAST1, LTI65, NAC, HTA8, HTA12 and RAP2.12-like proteins displayed major differences in gene expression between cultivars through the winter. These genes were therefore considered good candidates for key roles in the dormancy process in apple trees.
publishDate 2014
dc.date.none.fl_str_mv 2014-08-27
2014
2016-02-22T12:38:15Z
2016-02-22T12:38:15Z
2019-04-02T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plant Molecular Biology Reporter, v. 32, p. 796-813, 2014.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/993551
identifier_str_mv Plant Molecular Biology Reporter, v. 32, p. 796-813, 2014.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/993551
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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