Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.

Detalhes bibliográficos
Autor(a) principal: LOPES, S. da S.
Data de Publicação: 2020
Outros Autores: COSTA, J. F. da V., BARROS, B. de A., CARNEIRO, A. A., SOUSA, S. M. de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250
http://dx.doi.org/10.1590/1984- 70332020v20n2a28
Resumo: Determining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control.
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spelling Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.Cópia transgênicaTabacoControle endógenoPlanta TransgênicaGeneNicotiana TabacumDetermining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control.Simara da Silva Lopes, Universidade Federal de São João del-Rei; Jéssica Fabiane da Veiga Costa, Centro Universitário de Sete Lagoas; BEATRIZ DE ALMEIDA BARROS, CNPMS; ANDREA ALMEIDA CARNEIRO, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS.LOPES, S. da S.COSTA, J. F. da V.BARROS, B. de A.CARNEIRO, A. A.SOUSA, S. M. de2020-06-13T04:02:01Z2020-06-13T04:02:01Z2020-06-122020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCrop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250http://dx.doi.org/10.1590/1984- 70332020v20n2a28enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-06-13T04:02:19Zoai:www.alice.cnptia.embrapa.br:doc/1123250Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-06-13T04:02:19falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-06-13T04:02:19Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
title Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
spellingShingle Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
LOPES, S. da S.
Cópia transgênica
Tabaco
Controle endógeno
Planta Transgênica
Gene
Nicotiana Tabacum
title_short Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
title_full Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
title_fullStr Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
title_full_unstemmed Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
title_sort Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
author LOPES, S. da S.
author_facet LOPES, S. da S.
COSTA, J. F. da V.
BARROS, B. de A.
CARNEIRO, A. A.
SOUSA, S. M. de
author_role author
author2 COSTA, J. F. da V.
BARROS, B. de A.
CARNEIRO, A. A.
SOUSA, S. M. de
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Simara da Silva Lopes, Universidade Federal de São João del-Rei; Jéssica Fabiane da Veiga Costa, Centro Universitário de Sete Lagoas; BEATRIZ DE ALMEIDA BARROS, CNPMS; ANDREA ALMEIDA CARNEIRO, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS.
dc.contributor.author.fl_str_mv LOPES, S. da S.
COSTA, J. F. da V.
BARROS, B. de A.
CARNEIRO, A. A.
SOUSA, S. M. de
dc.subject.por.fl_str_mv Cópia transgênica
Tabaco
Controle endógeno
Planta Transgênica
Gene
Nicotiana Tabacum
topic Cópia transgênica
Tabaco
Controle endógeno
Planta Transgênica
Gene
Nicotiana Tabacum
description Determining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control.
publishDate 2020
dc.date.none.fl_str_mv 2020-06-13T04:02:01Z
2020-06-13T04:02:01Z
2020-06-12
2020
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Crop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250
http://dx.doi.org/10.1590/1984- 70332020v20n2a28
identifier_str_mv Crop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250
http://dx.doi.org/10.1590/1984- 70332020v20n2a28
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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