Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250 http://dx.doi.org/10.1590/1984- 70332020v20n2a28 |
Resumo: | Determining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control. |
id |
EMBR_7810e515c1f485257577057cd0498a46 |
---|---|
oai_identifier_str |
oai:www.alice.cnptia.embrapa.br:doc/1123250 |
network_acronym_str |
EMBR |
network_name_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository_id_str |
2154 |
spelling |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco.Cópia transgênicaTabacoControle endógenoPlanta TransgênicaGeneNicotiana TabacumDetermining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control.Simara da Silva Lopes, Universidade Federal de São João del-Rei; Jéssica Fabiane da Veiga Costa, Centro Universitário de Sete Lagoas; BEATRIZ DE ALMEIDA BARROS, CNPMS; ANDREA ALMEIDA CARNEIRO, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS.LOPES, S. da S.COSTA, J. F. da V.BARROS, B. de A.CARNEIRO, A. A.SOUSA, S. M. de2020-06-13T04:02:01Z2020-06-13T04:02:01Z2020-06-122020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCrop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250http://dx.doi.org/10.1590/1984- 70332020v20n2a28enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-06-13T04:02:19Zoai:www.alice.cnptia.embrapa.br:doc/1123250Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-06-13T04:02:19falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-06-13T04:02:19Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
title |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
spellingShingle |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. LOPES, S. da S. Cópia transgênica Tabaco Controle endógeno Planta Transgênica Gene Nicotiana Tabacum |
title_short |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
title_full |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
title_fullStr |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
title_full_unstemmed |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
title_sort |
Auxin independent1 (Axi1) as an endogenous gene for copy number determination in transgenic tobacco. |
author |
LOPES, S. da S. |
author_facet |
LOPES, S. da S. COSTA, J. F. da V. BARROS, B. de A. CARNEIRO, A. A. SOUSA, S. M. de |
author_role |
author |
author2 |
COSTA, J. F. da V. BARROS, B. de A. CARNEIRO, A. A. SOUSA, S. M. de |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Simara da Silva Lopes, Universidade Federal de São João del-Rei; Jéssica Fabiane da Veiga Costa, Centro Universitário de Sete Lagoas; BEATRIZ DE ALMEIDA BARROS, CNPMS; ANDREA ALMEIDA CARNEIRO, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS. |
dc.contributor.author.fl_str_mv |
LOPES, S. da S. COSTA, J. F. da V. BARROS, B. de A. CARNEIRO, A. A. SOUSA, S. M. de |
dc.subject.por.fl_str_mv |
Cópia transgênica Tabaco Controle endógeno Planta Transgênica Gene Nicotiana Tabacum |
topic |
Cópia transgênica Tabaco Controle endógeno Planta Transgênica Gene Nicotiana Tabacum |
description |
Determining the copy number is important because it can greatly influence the expression level and genetic stability of transgenes. This study aimed to establish a methodology that can estimate the transgene copy number in tobacco (Nicotiana tabacum) using the Auxin independent1 (Axi1) gene as an endogenous control. Tobacco c.v. Petit Havana plants were transformed via Agrobacterium tumefaciens with a pMCG1005 vector that contained Bar as a selective gene. Oligonucleotide efficiency was determined and a qPCR using the 2-ΔCt and 2-ΔΔCt methods was performed. Bar was the target gene and Axi1 was the endogenous control in five transgenic tobacco events. The results showed that the Axi1 gene was donated by the maternal parent N. sylvestris when interspecific hybridization occurred between N. sylvestris and N. tomentosiformis. The copy number results agreed with the segregation ratios for the Bar gene in T1 plants, which confirmed that Axi1 is a single copy gene that can be used as an endogenous control. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-06-13T04:02:01Z 2020-06-13T04:02:01Z 2020-06-12 2020 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Crop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250 http://dx.doi.org/10.1590/1984- 70332020v20n2a28 |
identifier_str_mv |
Crop Breeding and Applied Biotechnology, v. 20, n. 2, e289220212, 2020. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1123250 http://dx.doi.org/10.1590/1984- 70332020v20n2a28 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
_version_ |
1794503493185175552 |