Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.

Detalhes bibliográficos
Autor(a) principal: BRONDANI, C.
Data de Publicação: 2000
Outros Autores: BRONDANI, R. P. V., GARRIDO, L. da R., FERREIRA, M. E.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889
https://doi.org/10.1590/S1415-47572000000400009
Resumo: An AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics..
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spelling Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.MicrossateliteBrusoneCloneDNAPyricularia GriseaMagnaporthe griseaAn AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics..CLAUDIO BRONDANI, CNPAF; ROSANA PEREIRA VIANELLO, CNPAF; LUCAS DA RESSURREIÇÃO GARRIDO, CENARGEN; MARCIO ELIAS FERREIRA, CENARGEN.BRONDANI, C.BRONDANI, R. P. V.GARRIDO, L. da R.FERREIRA, M. E.2013-03-21T23:31:23Z2013-03-21T23:31:23Z2003-05-1320002017-11-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000.http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889https://doi.org/10.1590/S1415-47572000000400009enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2013-09-20T11:20:08Zoai:www.alice.cnptia.embrapa.br:doc/210889Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542013-09-20T11:20:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
title Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
spellingShingle Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
BRONDANI, C.
Microssatelite
Brusone
Clone
DNA
Pyricularia Grisea
Magnaporthe grisea
title_short Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
title_full Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
title_fullStr Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
title_full_unstemmed Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
title_sort Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
author BRONDANI, C.
author_facet BRONDANI, C.
BRONDANI, R. P. V.
GARRIDO, L. da R.
FERREIRA, M. E.
author_role author
author2 BRONDANI, R. P. V.
GARRIDO, L. da R.
FERREIRA, M. E.
author2_role author
author
author
dc.contributor.none.fl_str_mv CLAUDIO BRONDANI, CNPAF; ROSANA PEREIRA VIANELLO, CNPAF; LUCAS DA RESSURREIÇÃO GARRIDO, CENARGEN; MARCIO ELIAS FERREIRA, CENARGEN.
dc.contributor.author.fl_str_mv BRONDANI, C.
BRONDANI, R. P. V.
GARRIDO, L. da R.
FERREIRA, M. E.
dc.subject.por.fl_str_mv Microssatelite
Brusone
Clone
DNA
Pyricularia Grisea
Magnaporthe grisea
topic Microssatelite
Brusone
Clone
DNA
Pyricularia Grisea
Magnaporthe grisea
description An AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics..
publishDate 2000
dc.date.none.fl_str_mv 2000
2003-05-13
2013-03-21T23:31:23Z
2013-03-21T23:31:23Z
2017-11-16T11:11:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889
https://doi.org/10.1590/S1415-47572000000400009
identifier_str_mv Genetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889
https://doi.org/10.1590/S1415-47572000000400009
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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