Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.
Autor(a) principal: | |
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Data de Publicação: | 2000 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889 https://doi.org/10.1590/S1415-47572000000400009 |
Resumo: | An AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics.. |
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Development of microsatellite markers for the genetic analysis of Magnaporthe grisea.MicrossateliteBrusoneCloneDNAPyricularia GriseaMagnaporthe griseaAn AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics..CLAUDIO BRONDANI, CNPAF; ROSANA PEREIRA VIANELLO, CNPAF; LUCAS DA RESSURREIÇÃO GARRIDO, CENARGEN; MARCIO ELIAS FERREIRA, CENARGEN.BRONDANI, C.BRONDANI, R. P. V.GARRIDO, L. da R.FERREIRA, M. E.2013-03-21T23:31:23Z2013-03-21T23:31:23Z2003-05-1320002017-11-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000.http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889https://doi.org/10.1590/S1415-47572000000400009enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2013-09-20T11:20:08Zoai:www.alice.cnptia.embrapa.br:doc/210889Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542013-09-20T11:20:08Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
title |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
spellingShingle |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. BRONDANI, C. Microssatelite Brusone Clone DNA Pyricularia Grisea Magnaporthe grisea |
title_short |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
title_full |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
title_fullStr |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
title_full_unstemmed |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
title_sort |
Development of microsatellite markers for the genetic analysis of Magnaporthe grisea. |
author |
BRONDANI, C. |
author_facet |
BRONDANI, C. BRONDANI, R. P. V. GARRIDO, L. da R. FERREIRA, M. E. |
author_role |
author |
author2 |
BRONDANI, R. P. V. GARRIDO, L. da R. FERREIRA, M. E. |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
CLAUDIO BRONDANI, CNPAF; ROSANA PEREIRA VIANELLO, CNPAF; LUCAS DA RESSURREIÇÃO GARRIDO, CENARGEN; MARCIO ELIAS FERREIRA, CENARGEN. |
dc.contributor.author.fl_str_mv |
BRONDANI, C. BRONDANI, R. P. V. GARRIDO, L. da R. FERREIRA, M. E. |
dc.subject.por.fl_str_mv |
Microssatelite Brusone Clone DNA Pyricularia Grisea Magnaporthe grisea |
topic |
Microssatelite Brusone Clone DNA Pyricularia Grisea Magnaporthe grisea |
description |
An AG microsatellite-enriched genomic DNA library was constructed for Magnaporthe grisea (anamorph Pyricularia grisea), the causal agent of rice blast. Seventy-two DNA clones containing microsatellite repeats were isolated and sequenced in order to develop a series of new PCR-based molecular markers to be used in genetic studies of the fungus. Twenty-four of these clones were selected to design primer pairs for the PCR amplification of microsatellite alleles. Single spore cultures of M. grisea isolated from rice and wheat in Brazil, Colombia and China were genotyped at three microsatellite loci. Isolates from southern Brazil were predominantly monomorphic at the tested SSR loci, indicating a low level of genetic variability in these samples. However, seven alleles were observed at the MGM-1 locus in isolates from Central Brazil and at least nine alleles were detected at the same locus in a sample of Colombian isolates. Polymorphism analysis at SSR loci is a simple and direct approach for estimating the genetic diversity of M. grisea isolates and a powerful tool for studying M. grisea genetics.. |
publishDate |
2000 |
dc.date.none.fl_str_mv |
2000 2003-05-13 2013-03-21T23:31:23Z 2013-03-21T23:31:23Z 2017-11-16T11:11:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000. http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889 https://doi.org/10.1590/S1415-47572000000400009 |
identifier_str_mv |
Genetics and Molecular Biology, v. 23, n. 4, p. 753-762, Dec. 2000. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/210889 https://doi.org/10.1590/S1415-47572000000400009 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1822720948363591680 |