Gene expression related to oxidative stress induced by herbicides in rice.
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636 |
Resumo: | Herbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in rice |
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Gene expression related to oxidative stress induced by herbicides in rice.Oryza SativaRiceGene expressionOxidative stressHerbicidesHerbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in riceDirceu Agostinetto, D.P. Benemann, J. Cechin, C. Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilDaiane P. Benemann, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilJoanei Cechin, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BraziMarcos A. Nohatto, Dep. of Agriculture, Federal Institute Catarinense-Campus Santa Rosa do Sul, Santa Rosa do Sul, SC– BrazilAna C. Langaro, Dep. of Agricultural and Environmental Engineering, Federal Rural Univ. of Rio de Janeiro, Seropédica, RJ- BrazilCristiano Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilLEANDRO VARGAS, CNPT.AGOSTINETTO, D.BENEMANN, D. P.CECHIN, J.NOHATTO, M. A.LANGARO, A. C.PIASECKI, C.VARGAS, L.2020-02-28T18:10:54Z2020-02-28T18:10:54Z2020-02-2820192020-02-28T18:10:54Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAgronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/112063610.2134/agronj2018.07.0448enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-02-28T18:11:02Zoai:www.alice.cnptia.embrapa.br:doc/1120636Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-02-28T18:11:02falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-02-28T18:11:02Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Gene expression related to oxidative stress induced by herbicides in rice. |
title |
Gene expression related to oxidative stress induced by herbicides in rice. |
spellingShingle |
Gene expression related to oxidative stress induced by herbicides in rice. AGOSTINETTO, D. Oryza Sativa Rice Gene expression Oxidative stress Herbicides |
title_short |
Gene expression related to oxidative stress induced by herbicides in rice. |
title_full |
Gene expression related to oxidative stress induced by herbicides in rice. |
title_fullStr |
Gene expression related to oxidative stress induced by herbicides in rice. |
title_full_unstemmed |
Gene expression related to oxidative stress induced by herbicides in rice. |
title_sort |
Gene expression related to oxidative stress induced by herbicides in rice. |
author |
AGOSTINETTO, D. |
author_facet |
AGOSTINETTO, D. BENEMANN, D. P. CECHIN, J. NOHATTO, M. A. LANGARO, A. C. PIASECKI, C. VARGAS, L. |
author_role |
author |
author2 |
BENEMANN, D. P. CECHIN, J. NOHATTO, M. A. LANGARO, A. C. PIASECKI, C. VARGAS, L. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Dirceu Agostinetto, D.P. Benemann, J. Cechin, C. Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil Daiane P. Benemann, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil Joanei Cechin, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazi Marcos A. Nohatto, Dep. of Agriculture, Federal Institute Catarinense-Campus Santa Rosa do Sul, Santa Rosa do Sul, SC– Brazil Ana C. Langaro, Dep. of Agricultural and Environmental Engineering, Federal Rural Univ. of Rio de Janeiro, Seropédica, RJ- Brazil Cristiano Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil LEANDRO VARGAS, CNPT. |
dc.contributor.author.fl_str_mv |
AGOSTINETTO, D. BENEMANN, D. P. CECHIN, J. NOHATTO, M. A. LANGARO, A. C. PIASECKI, C. VARGAS, L. |
dc.subject.por.fl_str_mv |
Oryza Sativa Rice Gene expression Oxidative stress Herbicides |
topic |
Oryza Sativa Rice Gene expression Oxidative stress Herbicides |
description |
Herbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in rice |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019 2020-02-28T18:10:54Z 2020-02-28T18:10:54Z 2020-02-28 2020-02-28T18:10:54Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Agronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636 10.2134/agronj2018.07.0448 |
identifier_str_mv |
Agronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019. 10.2134/agronj2018.07.0448 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
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Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503490575269888 |