Gene expression related to oxidative stress induced by herbicides in rice.

Detalhes bibliográficos
Autor(a) principal: AGOSTINETTO, D.
Data de Publicação: 2019
Outros Autores: BENEMANN, D. P., CECHIN, J., NOHATTO, M. A., LANGARO, A. C., PIASECKI, C., VARGAS, L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636
Resumo: Herbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in rice
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spelling Gene expression related to oxidative stress induced by herbicides in rice.Oryza SativaRiceGene expressionOxidative stressHerbicidesHerbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in riceDirceu Agostinetto, D.P. Benemann, J. Cechin, C. Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilDaiane P. Benemann, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilJoanei Cechin, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BraziMarcos A. Nohatto, Dep. of Agriculture, Federal Institute Catarinense-Campus Santa Rosa do Sul, Santa Rosa do Sul, SC– BrazilAna C. Langaro, Dep. of Agricultural and Environmental Engineering, Federal Rural Univ. of Rio de Janeiro, Seropédica, RJ- BrazilCristiano Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– BrazilLEANDRO VARGAS, CNPT.AGOSTINETTO, D.BENEMANN, D. P.CECHIN, J.NOHATTO, M. A.LANGARO, A. C.PIASECKI, C.VARGAS, L.2020-02-28T18:10:54Z2020-02-28T18:10:54Z2020-02-2820192020-02-28T18:10:54Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAgronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/112063610.2134/agronj2018.07.0448enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-02-28T18:11:02Zoai:www.alice.cnptia.embrapa.br:doc/1120636Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-02-28T18:11:02falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-02-28T18:11:02Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Gene expression related to oxidative stress induced by herbicides in rice.
title Gene expression related to oxidative stress induced by herbicides in rice.
spellingShingle Gene expression related to oxidative stress induced by herbicides in rice.
AGOSTINETTO, D.
Oryza Sativa
Rice
Gene expression
Oxidative stress
Herbicides
title_short Gene expression related to oxidative stress induced by herbicides in rice.
title_full Gene expression related to oxidative stress induced by herbicides in rice.
title_fullStr Gene expression related to oxidative stress induced by herbicides in rice.
title_full_unstemmed Gene expression related to oxidative stress induced by herbicides in rice.
title_sort Gene expression related to oxidative stress induced by herbicides in rice.
author AGOSTINETTO, D.
author_facet AGOSTINETTO, D.
BENEMANN, D. P.
CECHIN, J.
NOHATTO, M. A.
LANGARO, A. C.
PIASECKI, C.
VARGAS, L.
author_role author
author2 BENEMANN, D. P.
CECHIN, J.
NOHATTO, M. A.
LANGARO, A. C.
PIASECKI, C.
VARGAS, L.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Dirceu Agostinetto, D.P. Benemann, J. Cechin, C. Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil
Daiane P. Benemann, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil
Joanei Cechin, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazi
Marcos A. Nohatto, Dep. of Agriculture, Federal Institute Catarinense-Campus Santa Rosa do Sul, Santa Rosa do Sul, SC– Brazil
Ana C. Langaro, Dep. of Agricultural and Environmental Engineering, Federal Rural Univ. of Rio de Janeiro, Seropédica, RJ- Brazil
Cristiano Piasecki, Dep. of Crop Protection, Federal Univ. of Pelotas- Campus Capão do Leão, Zip Code 96010-900, Capão do Leão, RS– Brazil
LEANDRO VARGAS, CNPT.
dc.contributor.author.fl_str_mv AGOSTINETTO, D.
BENEMANN, D. P.
CECHIN, J.
NOHATTO, M. A.
LANGARO, A. C.
PIASECKI, C.
VARGAS, L.
dc.subject.por.fl_str_mv Oryza Sativa
Rice
Gene expression
Oxidative stress
Herbicides
topic Oryza Sativa
Rice
Gene expression
Oxidative stress
Herbicides
description Herbicides are stressors that can have negative effects on plants. In Oryza sativa (L.), differential gene expression may be evalu-ated through real-time reverse transcription quantitative poly-merase chain reaction (RT-qPCR). The aim of this study was to evaluate the stability of candidate reference genes and to quan-tify the relative expression of oxidative stress genes at different times (12, 24, 48, and 96 hours after treatment [HAT]) with penoxsulam, cyhalofop-butyl, and bentazon herbicides. Norm-Finder, BestKeeper, and GeNorm software and the compara-tive ∆Ct method were used to assess expression stability and to determine the RT-qPCR threshold values of the candidate reference genes. The UBQ5 gene was the most stable among the reference genes analyzed. The gene expression results showed upregulation of OsCAT and OsMnSOD1 genes at all times after herbicide application. The OsA PX 2 and OsGST3 genes showed increased gene expression at 12 and 96 HAT for all herbicides. The OsHO -1 gene had the most significant expression changes, with maximum expression levels at 24 HAT with bentazon and at 96 HAT with penoxsulam and cyhalofop-butyl. Overall, antioxidant system gene expression increased after the applica-tion of bentazon, penoxsulam, and cyhalofop-butyl in rice
publishDate 2019
dc.date.none.fl_str_mv 2019
2020-02-28T18:10:54Z
2020-02-28T18:10:54Z
2020-02-28
2020-02-28T18:10:54Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Agronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636
10.2134/agronj2018.07.0448
identifier_str_mv Agronomy JOurnal, v. 3, n. 3, p. 1239-1246, March 2019.
10.2134/agronj2018.07.0448
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1120636
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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