Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840 https://doi.org/10.1038/s41598-022-15688-4 |
Resumo: | Methods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits. |
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Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.Multivariate analysisPlant selection guidesGenotypeStrawberriesMethods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits.ENEIDE BARTH, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; JULIANO TADEU VILELA DE RESENDE, UNIVERSIDADE ESTADUAL DE LONDRINA; KENY HENRIQUE MARIGUELE, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; MARCOS DEON VILELA DE RESENDE, CNPCa; ANDRÉ LUIZ BISCAIA RIBEIRO DA SILVA, AUBURN UNIVERSITY; SUSHAN RU, AUBURN UNIVERSITY.BARTH, E.RESENDE, J. T. V. deMARIGUELE, K. H.RESENDE, M. D. V. deSILVA, A. L. B. R. daRU, S.2023-01-10T16:01:24Z2023-01-10T16:01:24Z2023-01-102022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article12 p.Scientific Reports, v. 12, 11458, 2022.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840https://doi.org/10.1038/s41598-022-15688-4enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2023-01-10T16:01:24Zoai:www.alice.cnptia.embrapa.br:doc/1150840Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542023-01-10T16:01:24Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
title |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
spellingShingle |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. BARTH, E. Multivariate analysis Plant selection guides Genotype Strawberries |
title_short |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
title_full |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
title_fullStr |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
title_full_unstemmed |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
title_sort |
Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement. |
author |
BARTH, E. |
author_facet |
BARTH, E. RESENDE, J. T. V. de MARIGUELE, K. H. RESENDE, M. D. V. de SILVA, A. L. B. R. da RU, S. |
author_role |
author |
author2 |
RESENDE, J. T. V. de MARIGUELE, K. H. RESENDE, M. D. V. de SILVA, A. L. B. R. da RU, S. |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
ENEIDE BARTH, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; JULIANO TADEU VILELA DE RESENDE, UNIVERSIDADE ESTADUAL DE LONDRINA; KENY HENRIQUE MARIGUELE, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; MARCOS DEON VILELA DE RESENDE, CNPCa; ANDRÉ LUIZ BISCAIA RIBEIRO DA SILVA, AUBURN UNIVERSITY; SUSHAN RU, AUBURN UNIVERSITY. |
dc.contributor.author.fl_str_mv |
BARTH, E. RESENDE, J. T. V. de MARIGUELE, K. H. RESENDE, M. D. V. de SILVA, A. L. B. R. da RU, S. |
dc.subject.por.fl_str_mv |
Multivariate analysis Plant selection guides Genotype Strawberries |
topic |
Multivariate analysis Plant selection guides Genotype Strawberries |
description |
Methods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022 2023-01-10T16:01:24Z 2023-01-10T16:01:24Z 2023-01-10 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Scientific Reports, v. 12, 11458, 2022. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840 https://doi.org/10.1038/s41598-022-15688-4 |
identifier_str_mv |
Scientific Reports, v. 12, 11458, 2022. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840 https://doi.org/10.1038/s41598-022-15688-4 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
12 p. |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1822721598231150592 |