Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.

Detalhes bibliográficos
Autor(a) principal: BARTH, E.
Data de Publicação: 2022
Outros Autores: RESENDE, J. T. V. de, MARIGUELE, K. H., RESENDE, M. D. V. de, SILVA, A. L. B. R. da, RU, S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840
https://doi.org/10.1038/s41598-022-15688-4
Resumo: Methods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits.
id EMBR_a5e0f71fba0f3beb8c53cb67c1c2e507
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1150840
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.Multivariate analysisPlant selection guidesGenotypeStrawberriesMethods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits.ENEIDE BARTH, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; JULIANO TADEU VILELA DE RESENDE, UNIVERSIDADE ESTADUAL DE LONDRINA; KENY HENRIQUE MARIGUELE, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; MARCOS DEON VILELA DE RESENDE, CNPCa; ANDRÉ LUIZ BISCAIA RIBEIRO DA SILVA, AUBURN UNIVERSITY; SUSHAN RU, AUBURN UNIVERSITY.BARTH, E.RESENDE, J. T. V. deMARIGUELE, K. H.RESENDE, M. D. V. deSILVA, A. L. B. R. daRU, S.2023-01-10T16:01:24Z2023-01-10T16:01:24Z2023-01-102022info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article12 p.Scientific Reports, v. 12, 11458, 2022.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840https://doi.org/10.1038/s41598-022-15688-4enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2023-01-10T16:01:24Zoai:www.alice.cnptia.embrapa.br:doc/1150840Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542023-01-10T16:01:24Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
title Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
spellingShingle Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
BARTH, E.
Multivariate analysis
Plant selection guides
Genotype
Strawberries
title_short Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
title_full Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
title_fullStr Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
title_full_unstemmed Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
title_sort Multivariate analysis methods improve the selection of strawberry genotypes with low cold requirement.
author BARTH, E.
author_facet BARTH, E.
RESENDE, J. T. V. de
MARIGUELE, K. H.
RESENDE, M. D. V. de
SILVA, A. L. B. R. da
RU, S.
author_role author
author2 RESENDE, J. T. V. de
MARIGUELE, K. H.
RESENDE, M. D. V. de
SILVA, A. L. B. R. da
RU, S.
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv ENEIDE BARTH, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; JULIANO TADEU VILELA DE RESENDE, UNIVERSIDADE ESTADUAL DE LONDRINA; KENY HENRIQUE MARIGUELE, EMPRESA DE PESQUISA AGROPECUÁRIA E EXTENSÃO RURAL DE SANTA CATARINA; MARCOS DEON VILELA DE RESENDE, CNPCa; ANDRÉ LUIZ BISCAIA RIBEIRO DA SILVA, AUBURN UNIVERSITY; SUSHAN RU, AUBURN UNIVERSITY.
dc.contributor.author.fl_str_mv BARTH, E.
RESENDE, J. T. V. de
MARIGUELE, K. H.
RESENDE, M. D. V. de
SILVA, A. L. B. R. da
RU, S.
dc.subject.por.fl_str_mv Multivariate analysis
Plant selection guides
Genotype
Strawberries
topic Multivariate analysis
Plant selection guides
Genotype
Strawberries
description Methods of multivariate analysis is a powerful approach to assist the initial stages of crops genetic improvement, particularly, because it allows many traits to be evaluated simultaneously. In this study, heat-tolerant genotypes have been selected by analyzing phenotypic diversity, direct and indirect relationships among traits were identified, and four selection indices compared. Diversity was estimated using K-means clustering with the number of clusters determined by the Elbow method, and the relationship among traits was quantified by path analysis. Parametric and non-parametric indices were applied to selected genotypes using the magnitude of genotypic variance, heritability, genotypic coefficient of variance, and assigned economic weight as selection criteria. The variability among materials led to the formation of two non-overlapping clusters containing 40 and 154 genotypes. Strong to moderate correlations were found between traits with direct effect of the number of commercial fruit on the mass of commercial fruit. The Smith and Hazel index showed the greatest total gains for all criteria; however, concerning the biochemical traits, the Mulamba and Mock index showed the highest magnitudes of predicted gains. Overall, the K-means clustering, correlation analysis, and path analysis complement the use of selection indices, allowing for selection of genotypes with better balance among the assessed traits.
publishDate 2022
dc.date.none.fl_str_mv 2022
2023-01-10T16:01:24Z
2023-01-10T16:01:24Z
2023-01-10
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Scientific Reports, v. 12, 11458, 2022.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840
https://doi.org/10.1038/s41598-022-15688-4
identifier_str_mv Scientific Reports, v. 12, 11458, 2022.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1150840
https://doi.org/10.1038/s41598-022-15688-4
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 12 p.
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1822721598231150592