Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.

Detalhes bibliográficos
Autor(a) principal: SILVA, J. M.
Data de Publicação: 2019
Outros Autores: LIMA, P. R. L., SOUZA, F. V. D., LEDO, C. A. da S., SOUZA, E. H., PESTANA, K. N., FERREIRA, C. F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1112718
Resumo: Due to the increasing search for renewable resources, plant fibers have become an alternative when creating new products. Studies demonstrate the potential use of pineapple fibers in composites. The objective of this work was to evaluate the genetic diversity and verify any association between ISSR (Inter Simple Sequence Repeats) bands and quality of pineapple fibers for use in cements in the civil construction. The study analyzed the genetic variability of 11 pineapple genotypes, as well as the possible association of 131 bands from 16 ISSR markers with fiber quality characteristics. Eleven bands were selected based on their high correlations (0.64578* to 0.72457*) with three fiber quality variables. Of these, two bands were purified, sequenced, and blasted against sequences in GenBank at NCBI. These markers can be used in marker assisted selection to genetically improve the quality of pineapple fiber. Bands that returned no hits in the NCBI BLAST search can be deposited as new sequences in the GenBank. Therefore, the SCAR markers, once validated, can be useful in pineapple genetic breeding programs worldwide by using molecular marker assisted selection for fiber resistance, which could subsidize the development of more promising genotypes for industrial use and contribute to the sustainability of this new production sector.
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spelling Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.AbacaxiDue to the increasing search for renewable resources, plant fibers have become an alternative when creating new products. Studies demonstrate the potential use of pineapple fibers in composites. The objective of this work was to evaluate the genetic diversity and verify any association between ISSR (Inter Simple Sequence Repeats) bands and quality of pineapple fibers for use in cements in the civil construction. The study analyzed the genetic variability of 11 pineapple genotypes, as well as the possible association of 131 bands from 16 ISSR markers with fiber quality characteristics. Eleven bands were selected based on their high correlations (0.64578* to 0.72457*) with three fiber quality variables. Of these, two bands were purified, sequenced, and blasted against sequences in GenBank at NCBI. These markers can be used in marker assisted selection to genetically improve the quality of pineapple fiber. Bands that returned no hits in the NCBI BLAST search can be deposited as new sequences in the GenBank. Therefore, the SCAR markers, once validated, can be useful in pineapple genetic breeding programs worldwide by using molecular marker assisted selection for fiber resistance, which could subsidize the development of more promising genotypes for industrial use and contribute to the sustainability of this new production sector.JULIANNA M. SILVA, UFRB; PAULO R. L. LIMA, UEFS; FERNANDA VIDIGAL DUARTE SOUZA, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF; EVERTON H. SOUZA, UFRB; KATIA N. PESTANA, UFRB; CLAUDIA FORTES FERREIRA, CNPMF.SILVA, J. M.LIMA, P. R. L.SOUZA, F. V. D.LEDO, C. A. da S.SOUZA, E. H.PESTANA, K. N.FERREIRA, C. F.2019-10-03T00:37:14Z2019-10-03T00:37:14Z2019-10-0220192019-10-03T00:37:14Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAnais da Academia Brasileira de Ciências, v..91, n.3, Epub Sep 16, Rio de Janeiro 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1112718enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-10-03T00:37:20Zoai:www.alice.cnptia.embrapa.br:doc/1112718Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-10-03T00:37:20falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-10-03T00:37:20Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
title Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
spellingShingle Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
SILVA, J. M.
Abacaxi
title_short Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
title_full Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
title_fullStr Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
title_full_unstemmed Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
title_sort Genetic diversity and nonparametric statistics to identify possible ISSR marker association with fiber quality of pineapple.
author SILVA, J. M.
author_facet SILVA, J. M.
LIMA, P. R. L.
SOUZA, F. V. D.
LEDO, C. A. da S.
SOUZA, E. H.
PESTANA, K. N.
FERREIRA, C. F.
author_role author
author2 LIMA, P. R. L.
SOUZA, F. V. D.
LEDO, C. A. da S.
SOUZA, E. H.
PESTANA, K. N.
FERREIRA, C. F.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv JULIANNA M. SILVA, UFRB; PAULO R. L. LIMA, UEFS; FERNANDA VIDIGAL DUARTE SOUZA, CNPMF; CARLOS ALBERTO DA SILVA LEDO, CNPMF; EVERTON H. SOUZA, UFRB; KATIA N. PESTANA, UFRB; CLAUDIA FORTES FERREIRA, CNPMF.
dc.contributor.author.fl_str_mv SILVA, J. M.
LIMA, P. R. L.
SOUZA, F. V. D.
LEDO, C. A. da S.
SOUZA, E. H.
PESTANA, K. N.
FERREIRA, C. F.
dc.subject.por.fl_str_mv Abacaxi
topic Abacaxi
description Due to the increasing search for renewable resources, plant fibers have become an alternative when creating new products. Studies demonstrate the potential use of pineapple fibers in composites. The objective of this work was to evaluate the genetic diversity and verify any association between ISSR (Inter Simple Sequence Repeats) bands and quality of pineapple fibers for use in cements in the civil construction. The study analyzed the genetic variability of 11 pineapple genotypes, as well as the possible association of 131 bands from 16 ISSR markers with fiber quality characteristics. Eleven bands were selected based on their high correlations (0.64578* to 0.72457*) with three fiber quality variables. Of these, two bands were purified, sequenced, and blasted against sequences in GenBank at NCBI. These markers can be used in marker assisted selection to genetically improve the quality of pineapple fiber. Bands that returned no hits in the NCBI BLAST search can be deposited as new sequences in the GenBank. Therefore, the SCAR markers, once validated, can be useful in pineapple genetic breeding programs worldwide by using molecular marker assisted selection for fiber resistance, which could subsidize the development of more promising genotypes for industrial use and contribute to the sustainability of this new production sector.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-03T00:37:14Z
2019-10-03T00:37:14Z
2019-10-02
2019
2019-10-03T00:37:14Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Anais da Academia Brasileira de Ciências, v..91, n.3, Epub Sep 16, Rio de Janeiro 2019.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1112718
identifier_str_mv Anais da Academia Brasileira de Ciências, v..91, n.3, Epub Sep 16, Rio de Janeiro 2019.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1112718
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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