Early prediction models for cassava root yield in different water regimes.
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114761 |
Resumo: | The development of cassava (Manihot esculenta Crantz) varieties with greater tolerance of water deficit depends on optimized phenotyping tools. The objective of this work was to develop early prediction models of final root yield (12 months after planting - MAP) using physiological and agronomic data obtained at 4 MAP under two water regimes. Nine genotypes of cassava were evaluated under two treatments (irrigated and with water deficit), using a complete randomized block design, in a factorial scheme of 2 harvest periods (at 4 and 12 MAP) × 9 genotypes, with four replications. Both treatment groups were irrigated until 3 MAP. After this period, irrigation was interrupted for the water deficit treatment group. Fourteen physiological and agronomic traits were evaluated in all harvest periods. Four prediction models were evaluated: linear regression with stepwise selection (LRSS), linear regression with backward selection (LRBS), Bayesian ridge regression (BRR), and partial least squares (PLS). Most of the models presented a high predictive ability for final root yield (R2 ranging from 0.83 to 0.91). However, in all prediction scenarios, the PLS model presented a high R2 (0.84 to 0.91) associated with the lowest root-mean-square error (RMSE) (0.82 to 1.60). Differences in the predictive ability of the models may have occurred due to the relative importance of the early traits. In the case of PLS, the most important traits for the model were stomatal conductance, root yield at 4 MAP, leaf area index and number of roots. Regardless of the water condition, the physiological and agronomic data collected at an early stage could successfully be used to predict the final root yield with great efficiency. This strategy can reduce the cost of phenotyping, increasing the capacity for analysis and optimization of genetic gains for tolerance to drought in cassava. |
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Early prediction models for cassava root yield in different water regimes.Raízes de mandiocaDéfic hídricoFenotipagemMandiocaManihot EsculentaFisiologiaPlant breedingCassavaPhysiologyThe development of cassava (Manihot esculenta Crantz) varieties with greater tolerance of water deficit depends on optimized phenotyping tools. The objective of this work was to develop early prediction models of final root yield (12 months after planting - MAP) using physiological and agronomic data obtained at 4 MAP under two water regimes. Nine genotypes of cassava were evaluated under two treatments (irrigated and with water deficit), using a complete randomized block design, in a factorial scheme of 2 harvest periods (at 4 and 12 MAP) × 9 genotypes, with four replications. Both treatment groups were irrigated until 3 MAP. After this period, irrigation was interrupted for the water deficit treatment group. Fourteen physiological and agronomic traits were evaluated in all harvest periods. Four prediction models were evaluated: linear regression with stepwise selection (LRSS), linear regression with backward selection (LRBS), Bayesian ridge regression (BRR), and partial least squares (PLS). Most of the models presented a high predictive ability for final root yield (R2 ranging from 0.83 to 0.91). However, in all prediction scenarios, the PLS model presented a high R2 (0.84 to 0.91) associated with the lowest root-mean-square error (RMSE) (0.82 to 1.60). Differences in the predictive ability of the models may have occurred due to the relative importance of the early traits. In the case of PLS, the most important traits for the model were stomatal conductance, root yield at 4 MAP, leaf area index and number of roots. Regardless of the water condition, the physiological and agronomic data collected at an early stage could successfully be used to predict the final root yield with great efficiency. This strategy can reduce the cost of phenotyping, increasing the capacity for analysis and optimization of genetic gains for tolerance to drought in cassava.Alison Borges Vitor, Universidade Federal do Recôncavo da Bahia, Cruz das Almas, BA; Rafael Parreira Diniz, Universidade Federal do Recôncavo da Bahia, Cruz das Almas, BA; CAROLINA VIANNA MORGANTE, CPATSA; RAFAELA PRISCILA ANTONIO, CPATSA; EDER JORGE DE OLIVEIRA, CNPMF.VITOR, A. B.DINIZ, R. P.MORGANTE, C. V.ANTONIO, R. P.OLIVEIRA, E. J. de2019-11-21T18:05:23Z2019-11-21T18:05:23Z2019-11-2120192020-01-22T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleField Crops Research, v. 239, p. 149-158, 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/111476110.1016/j.fcr.2019.05.017enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-11-21T18:05:30Zoai:www.alice.cnptia.embrapa.br:doc/1114761Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-11-21T18:05:30falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-11-21T18:05:30Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Early prediction models for cassava root yield in different water regimes. |
title |
Early prediction models for cassava root yield in different water regimes. |
spellingShingle |
Early prediction models for cassava root yield in different water regimes. VITOR, A. B. Raízes de mandioca Défic hídrico Fenotipagem Mandioca Manihot Esculenta Fisiologia Plant breeding Cassava Physiology |
title_short |
Early prediction models for cassava root yield in different water regimes. |
title_full |
Early prediction models for cassava root yield in different water regimes. |
title_fullStr |
Early prediction models for cassava root yield in different water regimes. |
title_full_unstemmed |
Early prediction models for cassava root yield in different water regimes. |
title_sort |
Early prediction models for cassava root yield in different water regimes. |
author |
VITOR, A. B. |
author_facet |
VITOR, A. B. DINIZ, R. P. MORGANTE, C. V. ANTONIO, R. P. OLIVEIRA, E. J. de |
author_role |
author |
author2 |
DINIZ, R. P. MORGANTE, C. V. ANTONIO, R. P. OLIVEIRA, E. J. de |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Alison Borges Vitor, Universidade Federal do Recôncavo da Bahia, Cruz das Almas, BA; Rafael Parreira Diniz, Universidade Federal do Recôncavo da Bahia, Cruz das Almas, BA; CAROLINA VIANNA MORGANTE, CPATSA; RAFAELA PRISCILA ANTONIO, CPATSA; EDER JORGE DE OLIVEIRA, CNPMF. |
dc.contributor.author.fl_str_mv |
VITOR, A. B. DINIZ, R. P. MORGANTE, C. V. ANTONIO, R. P. OLIVEIRA, E. J. de |
dc.subject.por.fl_str_mv |
Raízes de mandioca Défic hídrico Fenotipagem Mandioca Manihot Esculenta Fisiologia Plant breeding Cassava Physiology |
topic |
Raízes de mandioca Défic hídrico Fenotipagem Mandioca Manihot Esculenta Fisiologia Plant breeding Cassava Physiology |
description |
The development of cassava (Manihot esculenta Crantz) varieties with greater tolerance of water deficit depends on optimized phenotyping tools. The objective of this work was to develop early prediction models of final root yield (12 months after planting - MAP) using physiological and agronomic data obtained at 4 MAP under two water regimes. Nine genotypes of cassava were evaluated under two treatments (irrigated and with water deficit), using a complete randomized block design, in a factorial scheme of 2 harvest periods (at 4 and 12 MAP) × 9 genotypes, with four replications. Both treatment groups were irrigated until 3 MAP. After this period, irrigation was interrupted for the water deficit treatment group. Fourteen physiological and agronomic traits were evaluated in all harvest periods. Four prediction models were evaluated: linear regression with stepwise selection (LRSS), linear regression with backward selection (LRBS), Bayesian ridge regression (BRR), and partial least squares (PLS). Most of the models presented a high predictive ability for final root yield (R2 ranging from 0.83 to 0.91). However, in all prediction scenarios, the PLS model presented a high R2 (0.84 to 0.91) associated with the lowest root-mean-square error (RMSE) (0.82 to 1.60). Differences in the predictive ability of the models may have occurred due to the relative importance of the early traits. In the case of PLS, the most important traits for the model were stomatal conductance, root yield at 4 MAP, leaf area index and number of roots. Regardless of the water condition, the physiological and agronomic data collected at an early stage could successfully be used to predict the final root yield with great efficiency. This strategy can reduce the cost of phenotyping, increasing the capacity for analysis and optimization of genetic gains for tolerance to drought in cassava. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-11-21T18:05:23Z 2019-11-21T18:05:23Z 2019-11-21 2019 2020-01-22T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Field Crops Research, v. 239, p. 149-158, 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114761 10.1016/j.fcr.2019.05.017 |
identifier_str_mv |
Field Crops Research, v. 239, p. 149-158, 2019. 10.1016/j.fcr.2019.05.017 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114761 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503483975532544 |