Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.

Detalhes bibliográficos
Autor(a) principal: MATTOS, V. da S.
Data de Publicação: 2019
Outros Autores: MULET, K., CARES, J. E., GOMES, C. B., FERNANDEZ, D., SA, M. F. G. de, CARNEIRO, R. M. D. G., CASTAGNONE-SERENO, P.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147
https://doi.org/10.1094/PDIS-12-17-2015-RE
Resumo: Root-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world.
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spelling Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.Nematóide das galhasOryza SativaNematóideMarcador MolecularRoot-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world.VANESSA DA SILVA MATTOS, UNBKARINE MULET, CNRSJUVENIL ENRIQUE CARES, UNBCESAR BAUER GOMES, CPACTDIANA FERNANDEZ, IRDMARIA FATIMA GROSSI DE SA, CenargenREGINA MARIA DECHECHI G CARNEIRO, CenargenPHILIPPE CASTAGNONE-SERENO, INRA.MATTOS, V. da S.MULET, K.CARES, J. E.GOMES, C. B.FERNANDEZ, D.SA, M. F. G. deCARNEIRO, R. M. D. G.CASTAGNONE-SERENO, P.2019-01-07T23:50:25Z2019-01-07T23:50:25Z2019-01-0720192019-12-18T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlant Disease, v. 103, p. 83-88, Jan. 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147https://doi.org/10.1094/PDIS-12-17-2015-REenginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-01-07T23:50:25Zoai:www.alice.cnptia.embrapa.br:doc/1103147Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-01-07T23:50:25falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-01-07T23:50:25Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
title Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
spellingShingle Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
MATTOS, V. da S.
Nematóide das galhas
Oryza Sativa
Nematóide
Marcador Molecular
title_short Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
title_full Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
title_fullStr Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
title_full_unstemmed Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
title_sort Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
author MATTOS, V. da S.
author_facet MATTOS, V. da S.
MULET, K.
CARES, J. E.
GOMES, C. B.
FERNANDEZ, D.
SA, M. F. G. de
CARNEIRO, R. M. D. G.
CASTAGNONE-SERENO, P.
author_role author
author2 MULET, K.
CARES, J. E.
GOMES, C. B.
FERNANDEZ, D.
SA, M. F. G. de
CARNEIRO, R. M. D. G.
CASTAGNONE-SERENO, P.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv VANESSA DA SILVA MATTOS, UNB
KARINE MULET, CNRS
JUVENIL ENRIQUE CARES, UNB
CESAR BAUER GOMES, CPACT
DIANA FERNANDEZ, IRD
MARIA FATIMA GROSSI DE SA, Cenargen
REGINA MARIA DECHECHI G CARNEIRO, Cenargen
PHILIPPE CASTAGNONE-SERENO, INRA.
dc.contributor.author.fl_str_mv MATTOS, V. da S.
MULET, K.
CARES, J. E.
GOMES, C. B.
FERNANDEZ, D.
SA, M. F. G. de
CARNEIRO, R. M. D. G.
CASTAGNONE-SERENO, P.
dc.subject.por.fl_str_mv Nematóide das galhas
Oryza Sativa
Nematóide
Marcador Molecular
topic Nematóide das galhas
Oryza Sativa
Nematóide
Marcador Molecular
description Root-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-07T23:50:25Z
2019-01-07T23:50:25Z
2019-01-07
2019
2019-12-18T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plant Disease, v. 103, p. 83-88, Jan. 2019.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147
https://doi.org/10.1094/PDIS-12-17-2015-RE
identifier_str_mv Plant Disease, v. 103, p. 83-88, Jan. 2019.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147
https://doi.org/10.1094/PDIS-12-17-2015-RE
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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