Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147 https://doi.org/10.1094/PDIS-12-17-2015-RE |
Resumo: | Root-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world. |
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Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas.Nematóide das galhasOryza SativaNematóideMarcador MolecularRoot-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world.VANESSA DA SILVA MATTOS, UNBKARINE MULET, CNRSJUVENIL ENRIQUE CARES, UNBCESAR BAUER GOMES, CPACTDIANA FERNANDEZ, IRDMARIA FATIMA GROSSI DE SA, CenargenREGINA MARIA DECHECHI G CARNEIRO, CenargenPHILIPPE CASTAGNONE-SERENO, INRA.MATTOS, V. da S.MULET, K.CARES, J. E.GOMES, C. B.FERNANDEZ, D.SA, M. F. G. deCARNEIRO, R. M. D. G.CASTAGNONE-SERENO, P.2019-01-07T23:50:25Z2019-01-07T23:50:25Z2019-01-0720192019-12-18T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlant Disease, v. 103, p. 83-88, Jan. 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147https://doi.org/10.1094/PDIS-12-17-2015-REenginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-01-07T23:50:25Zoai:www.alice.cnptia.embrapa.br:doc/1103147Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-01-07T23:50:25falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-01-07T23:50:25Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
title |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
spellingShingle |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. MATTOS, V. da S. Nematóide das galhas Oryza Sativa Nematóide Marcador Molecular |
title_short |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
title_full |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
title_fullStr |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
title_full_unstemmed |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
title_sort |
Development of Diagnostic SCAR Markers for Meloidogyne graminicola, M. Oryzae, and M. salasi associated with irrigated rice fields in Americas. |
author |
MATTOS, V. da S. |
author_facet |
MATTOS, V. da S. MULET, K. CARES, J. E. GOMES, C. B. FERNANDEZ, D. SA, M. F. G. de CARNEIRO, R. M. D. G. CASTAGNONE-SERENO, P. |
author_role |
author |
author2 |
MULET, K. CARES, J. E. GOMES, C. B. FERNANDEZ, D. SA, M. F. G. de CARNEIRO, R. M. D. G. CASTAGNONE-SERENO, P. |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
VANESSA DA SILVA MATTOS, UNB KARINE MULET, CNRS JUVENIL ENRIQUE CARES, UNB CESAR BAUER GOMES, CPACT DIANA FERNANDEZ, IRD MARIA FATIMA GROSSI DE SA, Cenargen REGINA MARIA DECHECHI G CARNEIRO, Cenargen PHILIPPE CASTAGNONE-SERENO, INRA. |
dc.contributor.author.fl_str_mv |
MATTOS, V. da S. MULET, K. CARES, J. E. GOMES, C. B. FERNANDEZ, D. SA, M. F. G. de CARNEIRO, R. M. D. G. CASTAGNONE-SERENO, P. |
dc.subject.por.fl_str_mv |
Nematóide das galhas Oryza Sativa Nematóide Marcador Molecular |
topic |
Nematóide das galhas Oryza Sativa Nematóide Marcador Molecular |
description |
Root-knot nematodes (RKN) cause important production losses of rice (Oryza sativa L.) in the world. Together with Meloidogyne graminicola Golden and Birchfield 1965, M. oryzae Maas, Sanders and Dede, 1978 and M. salasi López, 1984 have been causing damages in irrigated rice fields in Central and South America. In addition, six other RKN species may occur in rice fields in other regions of the world. Correct identification of Meloidogyne spp. is difficult but essential for the management of rice RKNs. The objective of this study was to develop some species-specific molecular markers for the diagnosis of South American RKN rice-related species. Isozyme phenotypes indicated the occurrence of some RKN species in the Brazilian samples, namely M. graminicola, M. oryzae, M. javanica, and two cryptic species designated as Meloidogyne sp. 2 and Meloidogyne sp. 3. Random amplified polymorphic DNA (RAPD) analysis of 16 isolates revealed interspecific genetic polymorphism between Meloidogyne spp., but isolates belonging to the same species (i.e., sharing the same esterase phenotype) always clustered together, whatever the species considered. Specific SCAR markers of 230, 120, and 160 bp were developed for M. graminicola, M. oryzae, and M. salasi, respectively. These SCAR markers may be potential molecular tools for application in routine diagnostic procedures subject to their validation with other rice RKN field populations in the world. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-01-07T23:50:25Z 2019-01-07T23:50:25Z 2019-01-07 2019 2019-12-18T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Plant Disease, v. 103, p. 83-88, Jan. 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147 https://doi.org/10.1094/PDIS-12-17-2015-RE |
identifier_str_mv |
Plant Disease, v. 103, p. 83-88, Jan. 2019. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1103147 https://doi.org/10.1094/PDIS-12-17-2015-RE |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
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EMBRAPA |
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EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503468446121984 |