Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908 |
Resumo: | Rhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species. |
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Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.Fixação de nitrogênioNitrogen fixationRhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species.DOUGLAS FABIANO GOMES, UEL; JESIANE STEFÂNIA DA SILVA BATISTA, UNIFIL; ALINE LUIZA SCHIAVON1, UNIFIL; DIVA SOUZA ANDRADE, IAPAR; MARIANGELA HUNGRIA DA CUNHA, CNPSO.GOMES, D. F.BATISTA, J. S. da S.SCHIAVON, A. L.ANDRADE, D. S.HUNGRIA, M.2012-09-04T11:11:11Z2012-09-04T11:11:11Z2012-09-0420122018-04-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T01:58:01Zoai:www.alice.cnptia.embrapa.br:doc/932908Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T01:58:01falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T01:58:01Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
title |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
spellingShingle |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. GOMES, D. F. Fixação de nitrogênio Nitrogen fixation |
title_short |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
title_full |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
title_fullStr |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
title_full_unstemmed |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
title_sort |
Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress. |
author |
GOMES, D. F. |
author_facet |
GOMES, D. F. BATISTA, J. S. da S. SCHIAVON, A. L. ANDRADE, D. S. HUNGRIA, M. |
author_role |
author |
author2 |
BATISTA, J. S. da S. SCHIAVON, A. L. ANDRADE, D. S. HUNGRIA, M. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
DOUGLAS FABIANO GOMES, UEL; JESIANE STEFÂNIA DA SILVA BATISTA, UNIFIL; ALINE LUIZA SCHIAVON1, UNIFIL; DIVA SOUZA ANDRADE, IAPAR; MARIANGELA HUNGRIA DA CUNHA, CNPSO. |
dc.contributor.author.fl_str_mv |
GOMES, D. F. BATISTA, J. S. da S. SCHIAVON, A. L. ANDRADE, D. S. HUNGRIA, M. |
dc.subject.por.fl_str_mv |
Fixação de nitrogênio Nitrogen fixation |
topic |
Fixação de nitrogênio Nitrogen fixation |
description |
Rhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-09-04T11:11:11Z 2012-09-04T11:11:11Z 2012-09-04 2012 2018-04-16T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
BMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012. http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908 |
identifier_str_mv |
BMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503377885855744 |