Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.

Detalhes bibliográficos
Autor(a) principal: GOMES, D. F.
Data de Publicação: 2012
Outros Autores: BATISTA, J. S. da S., SCHIAVON, A. L., ANDRADE, D. S., HUNGRIA, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908
Resumo: Rhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species.
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spelling Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.Fixação de nitrogênioNitrogen fixationRhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species.DOUGLAS FABIANO GOMES, UEL; JESIANE STEFÂNIA DA SILVA BATISTA, UNIFIL; ALINE LUIZA SCHIAVON1, UNIFIL; DIVA SOUZA ANDRADE, IAPAR; MARIANGELA HUNGRIA DA CUNHA, CNPSO.GOMES, D. F.BATISTA, J. S. da S.SCHIAVON, A. L.ANDRADE, D. S.HUNGRIA, M.2012-09-04T11:11:11Z2012-09-04T11:11:11Z2012-09-0420122018-04-16T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T01:58:01Zoai:www.alice.cnptia.embrapa.br:doc/932908Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T01:58:01falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T01:58:01Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
title Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
spellingShingle Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
GOMES, D. F.
Fixação de nitrogênio
Nitrogen fixation
title_short Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
title_full Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
title_fullStr Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
title_full_unstemmed Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
title_sort Proteomic profiling of Rhizobium tropici PRF 81: identification of conserved and specific responses to heat stress.
author GOMES, D. F.
author_facet GOMES, D. F.
BATISTA, J. S. da S.
SCHIAVON, A. L.
ANDRADE, D. S.
HUNGRIA, M.
author_role author
author2 BATISTA, J. S. da S.
SCHIAVON, A. L.
ANDRADE, D. S.
HUNGRIA, M.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv DOUGLAS FABIANO GOMES, UEL; JESIANE STEFÂNIA DA SILVA BATISTA, UNIFIL; ALINE LUIZA SCHIAVON1, UNIFIL; DIVA SOUZA ANDRADE, IAPAR; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
dc.contributor.author.fl_str_mv GOMES, D. F.
BATISTA, J. S. da S.
SCHIAVON, A. L.
ANDRADE, D. S.
HUNGRIA, M.
dc.subject.por.fl_str_mv Fixação de nitrogênio
Nitrogen fixation
topic Fixação de nitrogênio
Nitrogen fixation
description Rhizobium tropici strain PRF 81 (= SEMIA 4080) has been used in commercial inoculants for application to common-bean crops in Brazil since 1998, due to its high efficiency in fixing nitrogen, competitiveness against indigenous rhizobial populations and capacity to adapt to stressful tropical conditions, representing a key alternative to application of N-fertilizers. The objective of our study was to obtain an overview of adaptive responses to heat stress of strain PRF 81, by analyzing differentially expressed proteins when the bacterium is grown at 28°C and 35°C. Results: Two-dimensional gel electrophoresis (2DE) revealed up-regulation of fifty-nine spots that were identified by MALDI-TOF/TOF-TOF. Differentially expressed proteins were associated with the functional COG categories of metabolism, cellular processes and signaling, information storage and processing. Among the up-regulated proteins, we found some related to conserved heat responses, such as molecular chaperones DnaK and GroEL, and other related proteins, such as translation factors EF-Tu, EF-G, EF-Ts and IF2. Interestingly, several oxidative stress-responsive proteins were also up-regulated, and these results reveal the diversity of adaptation mechanisms presented by this thermotolerant strain, suggesting a cross-talk between heat and oxidative stresses. Conclusions: Our data provide valuable protein-expression information relevant to the ongoing genome sequencing of strain PRF 81, and contributes to our still-poor knowledge of the molecular determinants of the thermotolerance exhibited by R. tropici species.
publishDate 2012
dc.date.none.fl_str_mv 2012-09-04T11:11:11Z
2012-09-04T11:11:11Z
2012-09-04
2012
2018-04-16T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908
identifier_str_mv BMC Microbiology, London, v. 12, n. 84, p. 1-12, May 2012.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/932908
dc.language.iso.fl_str_mv eng
language eng
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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