Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.

Detalhes bibliográficos
Autor(a) principal: DELAMUTA, J. R. M.
Data de Publicação: 2012
Outros Autores: RIBEIRO, R. A., MENNA, P., BANGEL, E. V., HUNGRIA, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/932947
Resumo: Symbiotic association of several genera of bacteria collectively called as rhizobia and plants belonging to the family Leguminosae (=Fabaceae) results in the process of biological nitrogen fixation, playing a key role in global N cycling, and also bringing relevant contributions to the agriculture. Bradyrhizobium is considered as the ancestral of all nitrogen-fixing rhizobial species, probably originated in the tropics. The genus encompasses a variety of diverse bacteria, but the diversity captured in the analysis of the 16S rRNA is often low. In this study, we analyzed twelve Bradyrhizobium strains selected from previous studies performed by our group for showing high genetic diversity in relation to the described species. In addition to the 16S rRNA, five housekeeping genes (recA, atpD, glnII, gyrB and rpoB) were analyzed in the MLSA (multilocus sequence analysis) approach. Analysis of each gene and of the concatenated housekeeping genes captured a considerably higher level of genetic diversity, with indication of putative new species. The results highlight the high genetic variability associated with Bradyrhizobium microsymbionts of a variety of legumes. In addition, the MLSA approach has proved to represent a rapid and reliable method to be employed in phylogenetic and taxonomic studies, speeding the identification of the still poorly known diversity of nitrogen-fixing rhizobia in the tropics.
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spelling Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.Fixação biológica de nitrogênioSymbiotic association of several genera of bacteria collectively called as rhizobia and plants belonging to the family Leguminosae (=Fabaceae) results in the process of biological nitrogen fixation, playing a key role in global N cycling, and also bringing relevant contributions to the agriculture. Bradyrhizobium is considered as the ancestral of all nitrogen-fixing rhizobial species, probably originated in the tropics. The genus encompasses a variety of diverse bacteria, but the diversity captured in the analysis of the 16S rRNA is often low. In this study, we analyzed twelve Bradyrhizobium strains selected from previous studies performed by our group for showing high genetic diversity in relation to the described species. In addition to the 16S rRNA, five housekeeping genes (recA, atpD, glnII, gyrB and rpoB) were analyzed in the MLSA (multilocus sequence analysis) approach. Analysis of each gene and of the concatenated housekeeping genes captured a considerably higher level of genetic diversity, with indication of putative new species. The results highlight the high genetic variability associated with Bradyrhizobium microsymbionts of a variety of legumes. In addition, the MLSA approach has proved to represent a rapid and reliable method to be employed in phylogenetic and taxonomic studies, speeding the identification of the still poorly known diversity of nitrogen-fixing rhizobia in the tropics.JAKELINE RENATA MARÇON DELAMUTA, UEL; RENAN AUGUSTO RIBEIRO, CNPSO; PÂMELA MENNA, CNPq; ELIANE VILLAMIL BANGEL, Fundação Estadual de Pesquisa Agropecuária, RS; MARIANGELA HUNGRIA DA CUNHA, CNPSO.DELAMUTA, J. R. M.RIBEIRO, R. A.MENNA, P.BANGEL, E. V.HUNGRIA, M.2012-09-04T11:11:11Z2012-09-04T11:11:11Z2012-09-0420122017-08-05T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBrazilian Journal of Microbiology, São Paulo, v. 43, n.2, p. 698-710, Apr./June 2012.http://www.alice.cnptia.embrapa.br/alice/handle/doc/93294710.1590/S1517-83822012000200035enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-15T23:29:50Zoai:www.alice.cnptia.embrapa.br:doc/932947Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-15T23:29:50falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-15T23:29:50Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
title Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
spellingShingle Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
DELAMUTA, J. R. M.
Fixação biológica de nitrogênio
title_short Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
title_full Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
title_fullStr Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
title_full_unstemmed Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
title_sort Multilocus sequence analysis (MLSA) of Bradyrhizobium strains: revealing high diversity of tropical diazotrophic symbiotic bacteria.
author DELAMUTA, J. R. M.
author_facet DELAMUTA, J. R. M.
RIBEIRO, R. A.
MENNA, P.
BANGEL, E. V.
HUNGRIA, M.
author_role author
author2 RIBEIRO, R. A.
MENNA, P.
BANGEL, E. V.
HUNGRIA, M.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv JAKELINE RENATA MARÇON DELAMUTA, UEL; RENAN AUGUSTO RIBEIRO, CNPSO; PÂMELA MENNA, CNPq; ELIANE VILLAMIL BANGEL, Fundação Estadual de Pesquisa Agropecuária, RS; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
dc.contributor.author.fl_str_mv DELAMUTA, J. R. M.
RIBEIRO, R. A.
MENNA, P.
BANGEL, E. V.
HUNGRIA, M.
dc.subject.por.fl_str_mv Fixação biológica de nitrogênio
topic Fixação biológica de nitrogênio
description Symbiotic association of several genera of bacteria collectively called as rhizobia and plants belonging to the family Leguminosae (=Fabaceae) results in the process of biological nitrogen fixation, playing a key role in global N cycling, and also bringing relevant contributions to the agriculture. Bradyrhizobium is considered as the ancestral of all nitrogen-fixing rhizobial species, probably originated in the tropics. The genus encompasses a variety of diverse bacteria, but the diversity captured in the analysis of the 16S rRNA is often low. In this study, we analyzed twelve Bradyrhizobium strains selected from previous studies performed by our group for showing high genetic diversity in relation to the described species. In addition to the 16S rRNA, five housekeeping genes (recA, atpD, glnII, gyrB and rpoB) were analyzed in the MLSA (multilocus sequence analysis) approach. Analysis of each gene and of the concatenated housekeeping genes captured a considerably higher level of genetic diversity, with indication of putative new species. The results highlight the high genetic variability associated with Bradyrhizobium microsymbionts of a variety of legumes. In addition, the MLSA approach has proved to represent a rapid and reliable method to be employed in phylogenetic and taxonomic studies, speeding the identification of the still poorly known diversity of nitrogen-fixing rhizobia in the tropics.
publishDate 2012
dc.date.none.fl_str_mv 2012-09-04T11:11:11Z
2012-09-04T11:11:11Z
2012-09-04
2012
2017-08-05T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Brazilian Journal of Microbiology, São Paulo, v. 43, n.2, p. 698-710, Apr./June 2012.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/932947
10.1590/S1517-83822012000200035
identifier_str_mv Brazilian Journal of Microbiology, São Paulo, v. 43, n.2, p. 698-710, Apr./June 2012.
10.1590/S1517-83822012000200035
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/932947
dc.language.iso.fl_str_mv eng
language eng
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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