Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.

Detalhes bibliográficos
Autor(a) principal: SENRA, J. F. de B.
Data de Publicação: 2020
Outros Autores: FERRAO, M. A. G., MENDONÇA, R. F. de, FONSECA, A. F. A. da, FERRÃO, R. G., VOLPI, P. S., VERDIN FILHO, A. C., COMÉRIO, M., SILVA, M. W. da
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1128128
Resumo: This study aimed to analyze the genetic variability of 323 accessions of the Active Germplasm Bank (BAG) of Coffea canephora of the Institute for Research, Technical Assistance and Rural Extension of Espírito Santo (Incaper) using 38 quantitative phenotypic characters. The standardized average Euclidean distance between the accessions was estimated to generate a statistical distance matrix and, from this, the groupings were performed using the Tocher and UPGMA. Concerning the studied accessions, the amplitude of the data set for each characteristic, and the possibility of selection were visualized. The accuracy of data collection was verified by the Variation Index with values below 10% for most of the characters, except for characters such as number of rosettes in the upper plagiotropic branch, number of grains in the smallest orthotropic branch, and number of grains per rosette on the upper plagiotropic branch. Using the Tocher method, 25 groups were recognized, 10 of which were formed by only one accession. The hierarchical grouping highlighted the lack of duplicates and accessions 173 (ES 1-B) as the most genetically distant. The analysis of the relative contribution of each character distinguished fresh matter and dry matter of orthotropic branches thrown by plants susceptible to pruning as fundamental for the differentiation of accessions and important in future studies of diversity as they are responsible for about 83% of the phenotypic variability of the study. There were no duplicates among the evaluated accessions and there are heterotic groups and distinct accessions in the BAG that can be used in hybridization programs or per se to obtain new cultivars. The pairs of the most similar and dissimilar accessions were 45 (148/86) and 320 (IAC37) with a statistical distance of 0.0713 and 173 (ES 1-B) and 270 (403-Marilândia) with a distance of 0.4765, respectively.
id EMBR_c5ecc06e9d13e85856a5bc3350452076
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1128128
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.Coffea CanephoraMultivariate analysisSpecies diversityCluster analysisThis study aimed to analyze the genetic variability of 323 accessions of the Active Germplasm Bank (BAG) of Coffea canephora of the Institute for Research, Technical Assistance and Rural Extension of Espírito Santo (Incaper) using 38 quantitative phenotypic characters. The standardized average Euclidean distance between the accessions was estimated to generate a statistical distance matrix and, from this, the groupings were performed using the Tocher and UPGMA. Concerning the studied accessions, the amplitude of the data set for each characteristic, and the possibility of selection were visualized. The accuracy of data collection was verified by the Variation Index with values below 10% for most of the characters, except for characters such as number of rosettes in the upper plagiotropic branch, number of grains in the smallest orthotropic branch, and number of grains per rosette on the upper plagiotropic branch. Using the Tocher method, 25 groups were recognized, 10 of which were formed by only one accession. The hierarchical grouping highlighted the lack of duplicates and accessions 173 (ES 1-B) as the most genetically distant. The analysis of the relative contribution of each character distinguished fresh matter and dry matter of orthotropic branches thrown by plants susceptible to pruning as fundamental for the differentiation of accessions and important in future studies of diversity as they are responsible for about 83% of the phenotypic variability of the study. There were no duplicates among the evaluated accessions and there are heterotic groups and distinct accessions in the BAG that can be used in hybridization programs or per se to obtain new cultivars. The pairs of the most similar and dissimilar accessions were 45 (148/86) and 320 (IAC37) with a statistical distance of 0.0713 and 173 (ES 1-B) and 270 (403-Marilândia) with a distance of 0.4765, respectively.Projeto: 10.18.20.019.00.06JOAO FELIPE DE BRITES SENRA, INCAPER; MARIA AMELIA GAVA FERRAO, CNPCa; RODOLFO FERREIRA DE MENDONÇA, INCAPER; AYMBIRÉ FRANCISCO ALMEIDA DA FONSECA, CNPCa; ROMÁRIO GAVA FERRÃO, INCAPER; PAULO SÉRGIO VOLPI, INCAPER; ABRAÃO CARLOS VERDIN FILHO, INCAPER; MARCONE COMÉRIO, INCAPER; MATHEUS WANDERMUREM DA SILVA, INCAPER.SENRA, J. F. de B.FERRAO, M. A. G.MENDONÇA, R. F. deFONSECA, A. F. A. daFERRÃO, R. G.VOLPI, P. S.VERDIN FILHO, A. C.COMÉRIO, M.SILVA, M. W. da2020-12-15T09:06:28Z2020-12-15T09:06:28Z2020-12-152020info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleJournal of Genetic Resources, v. 6, n. 2, p. 172-184, 2020.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1128128enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2020-12-15T09:06:35Zoai:www.alice.cnptia.embrapa.br:doc/1128128Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542020-12-15T09:06:35falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542020-12-15T09:06:35Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
title Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
spellingShingle Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
SENRA, J. F. de B.
Coffea Canephora
Multivariate analysis
Species diversity
Cluster analysis
title_short Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
title_full Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
title_fullStr Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
title_full_unstemmed Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
title_sort Genetic Variability of Access of the Active Germplasm Bank of Coffea canephora of Incaper in Southern Espírito Santo.
author SENRA, J. F. de B.
author_facet SENRA, J. F. de B.
FERRAO, M. A. G.
MENDONÇA, R. F. de
FONSECA, A. F. A. da
FERRÃO, R. G.
VOLPI, P. S.
VERDIN FILHO, A. C.
COMÉRIO, M.
SILVA, M. W. da
author_role author
author2 FERRAO, M. A. G.
MENDONÇA, R. F. de
FONSECA, A. F. A. da
FERRÃO, R. G.
VOLPI, P. S.
VERDIN FILHO, A. C.
COMÉRIO, M.
SILVA, M. W. da
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv JOAO FELIPE DE BRITES SENRA, INCAPER; MARIA AMELIA GAVA FERRAO, CNPCa; RODOLFO FERREIRA DE MENDONÇA, INCAPER; AYMBIRÉ FRANCISCO ALMEIDA DA FONSECA, CNPCa; ROMÁRIO GAVA FERRÃO, INCAPER; PAULO SÉRGIO VOLPI, INCAPER; ABRAÃO CARLOS VERDIN FILHO, INCAPER; MARCONE COMÉRIO, INCAPER; MATHEUS WANDERMUREM DA SILVA, INCAPER.
dc.contributor.author.fl_str_mv SENRA, J. F. de B.
FERRAO, M. A. G.
MENDONÇA, R. F. de
FONSECA, A. F. A. da
FERRÃO, R. G.
VOLPI, P. S.
VERDIN FILHO, A. C.
COMÉRIO, M.
SILVA, M. W. da
dc.subject.por.fl_str_mv Coffea Canephora
Multivariate analysis
Species diversity
Cluster analysis
topic Coffea Canephora
Multivariate analysis
Species diversity
Cluster analysis
description This study aimed to analyze the genetic variability of 323 accessions of the Active Germplasm Bank (BAG) of Coffea canephora of the Institute for Research, Technical Assistance and Rural Extension of Espírito Santo (Incaper) using 38 quantitative phenotypic characters. The standardized average Euclidean distance between the accessions was estimated to generate a statistical distance matrix and, from this, the groupings were performed using the Tocher and UPGMA. Concerning the studied accessions, the amplitude of the data set for each characteristic, and the possibility of selection were visualized. The accuracy of data collection was verified by the Variation Index with values below 10% for most of the characters, except for characters such as number of rosettes in the upper plagiotropic branch, number of grains in the smallest orthotropic branch, and number of grains per rosette on the upper plagiotropic branch. Using the Tocher method, 25 groups were recognized, 10 of which were formed by only one accession. The hierarchical grouping highlighted the lack of duplicates and accessions 173 (ES 1-B) as the most genetically distant. The analysis of the relative contribution of each character distinguished fresh matter and dry matter of orthotropic branches thrown by plants susceptible to pruning as fundamental for the differentiation of accessions and important in future studies of diversity as they are responsible for about 83% of the phenotypic variability of the study. There were no duplicates among the evaluated accessions and there are heterotic groups and distinct accessions in the BAG that can be used in hybridization programs or per se to obtain new cultivars. The pairs of the most similar and dissimilar accessions were 45 (148/86) and 320 (IAC37) with a statistical distance of 0.0713 and 173 (ES 1-B) and 270 (403-Marilândia) with a distance of 0.4765, respectively.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-15T09:06:28Z
2020-12-15T09:06:28Z
2020-12-15
2020
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Journal of Genetic Resources, v. 6, n. 2, p. 172-184, 2020.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1128128
identifier_str_mv Journal of Genetic Resources, v. 6, n. 2, p. 172-184, 2020.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1128128
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503499288936448