Challenges and lessons learned from digitizing small Brazilian herbaria.

Detalhes bibliográficos
Autor(a) principal: GASPER, A. L. De
Data de Publicação: 2021
Outros Autores: HEIDEN, G., VERSIEUX, L. M., LEITMAN, P. M., FORZZA, R. C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1140466
Resumo: The digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with the simultaneous acquisition of high-resolution images. Here we discuss some of the challenges we faced in digitizing samples and provide a series of suggestions to avoid common mistakes for herbaria that have yet to start the process. We used a professional camera, database management software, and a barcode scanner to digitize the collections of herbaria CRI, ECT, FURB, LUSC, and UFRN. Pre-revision of samples with prior restoration when needed, barcode fixation, and a good database allowed faster digitization of samples. Good database software and the formation of a network among small herbaria accelerated digitization and increased the number of images available of Brazilian biodiversity. Thus far, our joint efforts made 118,000 specimen images available online with the purpose of accelerating botanical research.
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spelling Challenges and lessons learned from digitizing small Brazilian herbaria.BiodiversidadeTaxonomiaThe digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with the simultaneous acquisition of high-resolution images. Here we discuss some of the challenges we faced in digitizing samples and provide a series of suggestions to avoid common mistakes for herbaria that have yet to start the process. We used a professional camera, database management software, and a barcode scanner to digitize the collections of herbaria CRI, ECT, FURB, LUSC, and UFRN. Pre-revision of samples with prior restoration when needed, barcode fixation, and a good database allowed faster digitization of samples. Good database software and the formation of a network among small herbaria accelerated digitization and increased the number of images available of Brazilian biodiversity. Thus far, our joint efforts made 118,000 specimen images available online with the purpose of accelerating botanical research.ANDRÉ LUÍS DE GASPER; GUSTAVO HEIDEN, CPACT; LEONARDO M. VERSIEUX; PAULA M. LEITMAN; RAFAELA C. FORZZA.GASPER, A. L. DeHEIDEN, G.VERSIEUX, L. M.LEITMAN, P. M.FORZZA, R. C.2022-03-02T18:01:45Z2022-03-02T18:01:45Z2022-03-022021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleActa Botanica Brasilica, v. 35, n. 4, p. 689-697, Oct./Dec. 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1140466dx.doi.org/10.1590/0102-33062020abb0246enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-03-02T18:01:55Zoai:www.alice.cnptia.embrapa.br:doc/1140466Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-03-02T18:01:55falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-03-02T18:01:55Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Challenges and lessons learned from digitizing small Brazilian herbaria.
title Challenges and lessons learned from digitizing small Brazilian herbaria.
spellingShingle Challenges and lessons learned from digitizing small Brazilian herbaria.
GASPER, A. L. De
Biodiversidade
Taxonomia
title_short Challenges and lessons learned from digitizing small Brazilian herbaria.
title_full Challenges and lessons learned from digitizing small Brazilian herbaria.
title_fullStr Challenges and lessons learned from digitizing small Brazilian herbaria.
title_full_unstemmed Challenges and lessons learned from digitizing small Brazilian herbaria.
title_sort Challenges and lessons learned from digitizing small Brazilian herbaria.
author GASPER, A. L. De
author_facet GASPER, A. L. De
HEIDEN, G.
VERSIEUX, L. M.
LEITMAN, P. M.
FORZZA, R. C.
author_role author
author2 HEIDEN, G.
VERSIEUX, L. M.
LEITMAN, P. M.
FORZZA, R. C.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv ANDRÉ LUÍS DE GASPER; GUSTAVO HEIDEN, CPACT; LEONARDO M. VERSIEUX; PAULA M. LEITMAN; RAFAELA C. FORZZA.
dc.contributor.author.fl_str_mv GASPER, A. L. De
HEIDEN, G.
VERSIEUX, L. M.
LEITMAN, P. M.
FORZZA, R. C.
dc.subject.por.fl_str_mv Biodiversidade
Taxonomia
topic Biodiversidade
Taxonomia
description The digital era provides new opportunities for taxonomists, as well as for everyone that studies biodiversity. Many herbaria have been able to digitize their collections, a process that started with the typing of label data, moving more recently towards the digitization of each sample with the simultaneous acquisition of high-resolution images. Here we discuss some of the challenges we faced in digitizing samples and provide a series of suggestions to avoid common mistakes for herbaria that have yet to start the process. We used a professional camera, database management software, and a barcode scanner to digitize the collections of herbaria CRI, ECT, FURB, LUSC, and UFRN. Pre-revision of samples with prior restoration when needed, barcode fixation, and a good database allowed faster digitization of samples. Good database software and the formation of a network among small herbaria accelerated digitization and increased the number of images available of Brazilian biodiversity. Thus far, our joint efforts made 118,000 specimen images available online with the purpose of accelerating botanical research.
publishDate 2021
dc.date.none.fl_str_mv 2021
2022-03-02T18:01:45Z
2022-03-02T18:01:45Z
2022-03-02
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Acta Botanica Brasilica, v. 35, n. 4, p. 689-697, Oct./Dec. 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1140466
dx.doi.org/10.1590/0102-33062020abb0246
identifier_str_mv Acta Botanica Brasilica, v. 35, n. 4, p. 689-697, Oct./Dec. 2021.
dx.doi.org/10.1590/0102-33062020abb0246
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1140466
dc.language.iso.fl_str_mv eng
language eng
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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