Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest.
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114427 |
Resumo: | Leaf Area Index (LAI) models that consider all phenological stages have not been developed for the Caatinga, the largest seasonally dry tropical forest in South America. LAI models that are currently used show moderate to high covariance when compared to in situ data, but they often lack accuracy in the whole spectra of possible values and do not consider the impact that the stems and branches have over LAI estimates, which is of great influence in the Caatinga. In this study, we develop and assess PAI (Plant Area Index) and LAI models by using ground-based measurements and satellite (Landsat) data. The objective of this study was to create and test new empirical models using a multi-year and multi-source of reflectance data. The study was based on measurements of photosynthetic photon flux density (PPFD) from above and below the canopy during the periods of 2011?2012 and 2016?2018. Through iterative processing, we obtained more than a million candidate models for estimating PAI and LAI. To clean up the small discrepancies in the extremes of each interpolated series, we smoothed out the dataset by fitting a logarithmic equation with the PAI data and the inverse contribution of WAI (Wood Area Index) to PAI, that is the portion of PAI that is actually LAI (LAIC). LAIC can be calculated as follows: LAIC = 1 (WAI/PAI)). We subtracted the WAI values from the PAI to develop our in situ LAI dataset that was used for further analysis. Our in situ dataset was also used as a reference to compare our models with four other models used for the Caatinga, as well as the MODIS-derived LAI products (MCD15A3H/A2H). Our main findings were as follows: (i) Six models use NDVI (Normalized Difference Vegetation Index), SAVI (Soil-Adjusted Vegetation Index) and EVI (Enhanced Vegetation Index) as input, and performed well, with r2 ranging from 0.77 to 0.79 (PAI) and 0.76 to 0.81 (LAI), and RMSE with a minimum of 0.41m2m?2 (PAI) and 0.40m2m?2 (LAI). The SAVI models showed values 20% and 32% (PAI), and 21% and 15% (LAI) smaller than those found for the models that use EVI and NDVI, respectively; (ii) the other models (ten) use only two bands, and in contrast to the first six models, these new models may abstract other physical processes and components, such as leaves etiolation and increasing protochlorophyll. The developed models used the near-infrared band, and they varied only in relation to the inclusion of the red, green, and blue bands. (iii) All previously published models and MODIS-LAI underperformed against our calibrated models. Our study was able to provide several PAI and LAI models that realistically represent the phenology of the Caatinga. |
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Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest.SemiáridoÍndice de área arborizadaÍndice de área foliarPlant Area IndexCaatingaFloresta TropicalFenologiaLandsatTropical forestsPhenologyLeaf Area Index (LAI) models that consider all phenological stages have not been developed for the Caatinga, the largest seasonally dry tropical forest in South America. LAI models that are currently used show moderate to high covariance when compared to in situ data, but they often lack accuracy in the whole spectra of possible values and do not consider the impact that the stems and branches have over LAI estimates, which is of great influence in the Caatinga. In this study, we develop and assess PAI (Plant Area Index) and LAI models by using ground-based measurements and satellite (Landsat) data. The objective of this study was to create and test new empirical models using a multi-year and multi-source of reflectance data. The study was based on measurements of photosynthetic photon flux density (PPFD) from above and below the canopy during the periods of 2011?2012 and 2016?2018. Through iterative processing, we obtained more than a million candidate models for estimating PAI and LAI. To clean up the small discrepancies in the extremes of each interpolated series, we smoothed out the dataset by fitting a logarithmic equation with the PAI data and the inverse contribution of WAI (Wood Area Index) to PAI, that is the portion of PAI that is actually LAI (LAIC). LAIC can be calculated as follows: LAIC = 1 (WAI/PAI)). We subtracted the WAI values from the PAI to develop our in situ LAI dataset that was used for further analysis. Our in situ dataset was also used as a reference to compare our models with four other models used for the Caatinga, as well as the MODIS-derived LAI products (MCD15A3H/A2H). Our main findings were as follows: (i) Six models use NDVI (Normalized Difference Vegetation Index), SAVI (Soil-Adjusted Vegetation Index) and EVI (Enhanced Vegetation Index) as input, and performed well, with r2 ranging from 0.77 to 0.79 (PAI) and 0.76 to 0.81 (LAI), and RMSE with a minimum of 0.41m2m?2 (PAI) and 0.40m2m?2 (LAI). The SAVI models showed values 20% and 32% (PAI), and 21% and 15% (LAI) smaller than those found for the models that use EVI and NDVI, respectively; (ii) the other models (ten) use only two bands, and in contrast to the first six models, these new models may abstract other physical processes and components, such as leaves etiolation and increasing protochlorophyll. The developed models used the near-infrared band, and they varied only in relation to the inclusion of the red, green, and blue bands. (iii) All previously published models and MODIS-LAI underperformed against our calibrated models. Our study was able to provide several PAI and LAI models that realistically represent the phenology of the Caatinga.Rodrigo de Queiroga Miranda, UFPE; Rodolfo Luiz Bezerra Nóbrega, University of Reading, Reading, UK; MAGNA SOELMA BESERRA DE MOURA, CPATSA; Srinivasan Raghavane, Texas A&M University, College Station, TX, USA; Josiclêda Domiciano Galvíncio, UFPE.MIRANDA, R. de Q.NÓBREGA, R. L. B.MOURA, M. S. B. deRAGHAVANE, S.GALVÍNCIO, J. D.2019-11-18T18:05:31Z2019-11-18T18:05:31Z2019-11-1820202020-04-17T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleInternational Journal of Applied Earth Observation and Geoinformation, v. 85, 2020.http://www.alice.cnptia.embrapa.br/alice/handle/doc/111442710.1016/j.jag.2019.101992enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-11-18T18:05:38Zoai:www.alice.cnptia.embrapa.br:doc/1114427Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-11-18T18:05:38falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-11-18T18:05:38Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
title |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
spellingShingle |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. MIRANDA, R. de Q. Semiárido Índice de área arborizada Índice de área foliar Plant Area Index Caatinga Floresta Tropical Fenologia Landsat Tropical forests Phenology |
title_short |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
title_full |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
title_fullStr |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
title_full_unstemmed |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
title_sort |
Realistic and simplified models of plant and leaf area indices for a seasonally dry tropical forest. |
author |
MIRANDA, R. de Q. |
author_facet |
MIRANDA, R. de Q. NÓBREGA, R. L. B. MOURA, M. S. B. de RAGHAVANE, S. GALVÍNCIO, J. D. |
author_role |
author |
author2 |
NÓBREGA, R. L. B. MOURA, M. S. B. de RAGHAVANE, S. GALVÍNCIO, J. D. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Rodrigo de Queiroga Miranda, UFPE; Rodolfo Luiz Bezerra Nóbrega, University of Reading, Reading, UK; MAGNA SOELMA BESERRA DE MOURA, CPATSA; Srinivasan Raghavane, Texas A&M University, College Station, TX, USA; Josiclêda Domiciano Galvíncio, UFPE. |
dc.contributor.author.fl_str_mv |
MIRANDA, R. de Q. NÓBREGA, R. L. B. MOURA, M. S. B. de RAGHAVANE, S. GALVÍNCIO, J. D. |
dc.subject.por.fl_str_mv |
Semiárido Índice de área arborizada Índice de área foliar Plant Area Index Caatinga Floresta Tropical Fenologia Landsat Tropical forests Phenology |
topic |
Semiárido Índice de área arborizada Índice de área foliar Plant Area Index Caatinga Floresta Tropical Fenologia Landsat Tropical forests Phenology |
description |
Leaf Area Index (LAI) models that consider all phenological stages have not been developed for the Caatinga, the largest seasonally dry tropical forest in South America. LAI models that are currently used show moderate to high covariance when compared to in situ data, but they often lack accuracy in the whole spectra of possible values and do not consider the impact that the stems and branches have over LAI estimates, which is of great influence in the Caatinga. In this study, we develop and assess PAI (Plant Area Index) and LAI models by using ground-based measurements and satellite (Landsat) data. The objective of this study was to create and test new empirical models using a multi-year and multi-source of reflectance data. The study was based on measurements of photosynthetic photon flux density (PPFD) from above and below the canopy during the periods of 2011?2012 and 2016?2018. Through iterative processing, we obtained more than a million candidate models for estimating PAI and LAI. To clean up the small discrepancies in the extremes of each interpolated series, we smoothed out the dataset by fitting a logarithmic equation with the PAI data and the inverse contribution of WAI (Wood Area Index) to PAI, that is the portion of PAI that is actually LAI (LAIC). LAIC can be calculated as follows: LAIC = 1 (WAI/PAI)). We subtracted the WAI values from the PAI to develop our in situ LAI dataset that was used for further analysis. Our in situ dataset was also used as a reference to compare our models with four other models used for the Caatinga, as well as the MODIS-derived LAI products (MCD15A3H/A2H). Our main findings were as follows: (i) Six models use NDVI (Normalized Difference Vegetation Index), SAVI (Soil-Adjusted Vegetation Index) and EVI (Enhanced Vegetation Index) as input, and performed well, with r2 ranging from 0.77 to 0.79 (PAI) and 0.76 to 0.81 (LAI), and RMSE with a minimum of 0.41m2m?2 (PAI) and 0.40m2m?2 (LAI). The SAVI models showed values 20% and 32% (PAI), and 21% and 15% (LAI) smaller than those found for the models that use EVI and NDVI, respectively; (ii) the other models (ten) use only two bands, and in contrast to the first six models, these new models may abstract other physical processes and components, such as leaves etiolation and increasing protochlorophyll. The developed models used the near-infrared band, and they varied only in relation to the inclusion of the red, green, and blue bands. (iii) All previously published models and MODIS-LAI underperformed against our calibrated models. Our study was able to provide several PAI and LAI models that realistically represent the phenology of the Caatinga. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-11-18T18:05:31Z 2019-11-18T18:05:31Z 2019-11-18 2020 2020-04-17T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
International Journal of Applied Earth Observation and Geoinformation, v. 85, 2020. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114427 10.1016/j.jag.2019.101992 |
identifier_str_mv |
International Journal of Applied Earth Observation and Geoinformation, v. 85, 2020. 10.1016/j.jag.2019.101992 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1114427 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
_version_ |
1794503483898986496 |