Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794 |
Resumo: | Abstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied. |
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Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.Raça Santa InêsCorrelação genéticaLegendre polynomialsPolinômio ordinárioPolinômios de LegendreGrowth curveGenetic parametersOvinoMelhoramento genético animalGenética animalParâmetro genéticoCurva de crescimentoSheepGenetic correlationgrowth traitsAbstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied.Universidade Federal do Piauí (UFPI) - Teresina, PI, Brasil; Universidade Federal de Viçosa (UFV) - Viçosa, MG, Brasil; EMEPA - João Pessoa, PB, Brasil; RAIMUNDO NONATO BRAGA LOBO, CNPC; Universidade Estadual Paulista (UNESP) - Jaboticabal, SP, Brasil; UFV - Viçosa, MG, Brazil; UFPI - Bom Jesus, PI, Brasil; UNESP - Jaboticabal, SP, Brasil.SARMENTO, J. L. R.TORRES, R. A.SOUSA, W. H.LOBO, R. N. B.ALBUQUERQUE, L. G.LOPES, P. S.SANTOS, N. P. S.BIGNARD, A. B.2018-01-26T23:43:14Z2018-01-26T23:43:14Z2016-06-2320162018-01-26T23:43:14Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016http://www.alice.cnptia.embrapa.br/alice/handle/doc/104779410.4238/gmr.15025749enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2018-01-26T23:43:20Zoai:www.alice.cnptia.embrapa.br:doc/1047794Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542018-01-26T23:43:20falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542018-01-26T23:43:20Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
title |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
spellingShingle |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. SARMENTO, J. L. R. Raça Santa Inês Correlação genética Legendre polynomials Polinômio ordinário Polinômios de Legendre Growth curve Genetic parameters Ovino Melhoramento genético animal Genética animal Parâmetro genético Curva de crescimento Sheep Genetic correlation growth traits |
title_short |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
title_full |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
title_fullStr |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
title_full_unstemmed |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
title_sort |
Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep. |
author |
SARMENTO, J. L. R. |
author_facet |
SARMENTO, J. L. R. TORRES, R. A. SOUSA, W. H. LOBO, R. N. B. ALBUQUERQUE, L. G. LOPES, P. S. SANTOS, N. P. S. BIGNARD, A. B. |
author_role |
author |
author2 |
TORRES, R. A. SOUSA, W. H. LOBO, R. N. B. ALBUQUERQUE, L. G. LOPES, P. S. SANTOS, N. P. S. BIGNARD, A. B. |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal do Piauí (UFPI) - Teresina, PI, Brasil; Universidade Federal de Viçosa (UFV) - Viçosa, MG, Brasil; EMEPA - João Pessoa, PB, Brasil; RAIMUNDO NONATO BRAGA LOBO, CNPC; Universidade Estadual Paulista (UNESP) - Jaboticabal, SP, Brasil; UFV - Viçosa, MG, Brazil; UFPI - Bom Jesus, PI, Brasil; UNESP - Jaboticabal, SP, Brasil. |
dc.contributor.author.fl_str_mv |
SARMENTO, J. L. R. TORRES, R. A. SOUSA, W. H. LOBO, R. N. B. ALBUQUERQUE, L. G. LOPES, P. S. SANTOS, N. P. S. BIGNARD, A. B. |
dc.subject.por.fl_str_mv |
Raça Santa Inês Correlação genética Legendre polynomials Polinômio ordinário Polinômios de Legendre Growth curve Genetic parameters Ovino Melhoramento genético animal Genética animal Parâmetro genético Curva de crescimento Sheep Genetic correlation growth traits |
topic |
Raça Santa Inês Correlação genética Legendre polynomials Polinômio ordinário Polinômios de Legendre Growth curve Genetic parameters Ovino Melhoramento genético animal Genética animal Parâmetro genético Curva de crescimento Sheep Genetic correlation growth traits |
description |
Abstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-06-23 2016 2018-01-26T23:43:14Z 2018-01-26T23:43:14Z 2018-01-26T23:43:14Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016 http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794 10.4238/gmr.15025749 |
identifier_str_mv |
Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016 10.4238/gmr.15025749 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
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Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
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EMBRAPA |
institution |
EMBRAPA |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
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Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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