Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.

Detalhes bibliográficos
Autor(a) principal: SARMENTO, J. L. R.
Data de Publicação: 2016
Outros Autores: TORRES, R. A., SOUSA, W. H., LOBO, R. N. B., ALBUQUERQUE, L. G., LOPES, P. S., SANTOS, N. P. S., BIGNARD, A. B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794
Resumo: Abstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied.
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spelling Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.Raça Santa InêsCorrelação genéticaLegendre polynomialsPolinômio ordinárioPolinômios de LegendreGrowth curveGenetic parametersOvinoMelhoramento genético animalGenética animalParâmetro genéticoCurva de crescimentoSheepGenetic correlationgrowth traitsAbstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied.Universidade Federal do Piauí (UFPI) - Teresina, PI, Brasil; Universidade Federal de Viçosa (UFV) - Viçosa, MG, Brasil; EMEPA - João Pessoa, PB, Brasil; RAIMUNDO NONATO BRAGA LOBO, CNPC; Universidade Estadual Paulista (UNESP) - Jaboticabal, SP, Brasil; UFV - Viçosa, MG, Brazil; UFPI - Bom Jesus, PI, Brasil; UNESP - Jaboticabal, SP, Brasil.SARMENTO, J. L. R.TORRES, R. A.SOUSA, W. H.LOBO, R. N. B.ALBUQUERQUE, L. G.LOPES, P. S.SANTOS, N. P. S.BIGNARD, A. B.2018-01-26T23:43:14Z2018-01-26T23:43:14Z2016-06-2320162018-01-26T23:43:14Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016http://www.alice.cnptia.embrapa.br/alice/handle/doc/104779410.4238/gmr.15025749enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2018-01-26T23:43:20Zoai:www.alice.cnptia.embrapa.br:doc/1047794Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542018-01-26T23:43:20falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542018-01-26T23:43:20Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
title Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
spellingShingle Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
SARMENTO, J. L. R.
Raça Santa Inês
Correlação genética
Legendre polynomials
Polinômio ordinário
Polinômios de Legendre
Growth curve
Genetic parameters
Ovino
Melhoramento genético animal
Genética animal
Parâmetro genético
Curva de crescimento
Sheep
Genetic correlation
growth traits
title_short Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
title_full Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
title_fullStr Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
title_full_unstemmed Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
title_sort Random regression models for the estimation of genetic and environmental covariance functions for growth traits in Santa Ines sheep.
author SARMENTO, J. L. R.
author_facet SARMENTO, J. L. R.
TORRES, R. A.
SOUSA, W. H.
LOBO, R. N. B.
ALBUQUERQUE, L. G.
LOPES, P. S.
SANTOS, N. P. S.
BIGNARD, A. B.
author_role author
author2 TORRES, R. A.
SOUSA, W. H.
LOBO, R. N. B.
ALBUQUERQUE, L. G.
LOPES, P. S.
SANTOS, N. P. S.
BIGNARD, A. B.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal do Piauí (UFPI) - Teresina, PI, Brasil; Universidade Federal de Viçosa (UFV) - Viçosa, MG, Brasil; EMEPA - João Pessoa, PB, Brasil; RAIMUNDO NONATO BRAGA LOBO, CNPC; Universidade Estadual Paulista (UNESP) - Jaboticabal, SP, Brasil; UFV - Viçosa, MG, Brazil; UFPI - Bom Jesus, PI, Brasil; UNESP - Jaboticabal, SP, Brasil.
dc.contributor.author.fl_str_mv SARMENTO, J. L. R.
TORRES, R. A.
SOUSA, W. H.
LOBO, R. N. B.
ALBUQUERQUE, L. G.
LOPES, P. S.
SANTOS, N. P. S.
BIGNARD, A. B.
dc.subject.por.fl_str_mv Raça Santa Inês
Correlação genética
Legendre polynomials
Polinômio ordinário
Polinômios de Legendre
Growth curve
Genetic parameters
Ovino
Melhoramento genético animal
Genética animal
Parâmetro genético
Curva de crescimento
Sheep
Genetic correlation
growth traits
topic Raça Santa Inês
Correlação genética
Legendre polynomials
Polinômio ordinário
Polinômios de Legendre
Growth curve
Genetic parameters
Ovino
Melhoramento genético animal
Genética animal
Parâmetro genético
Curva de crescimento
Sheep
Genetic correlation
growth traits
description Abstract: Polynomial functions of different orders were used to model random effects associated with weight of Santa Ines sheep from birth to 196 days. Fixed effects included in the models were contemporary groups, age of ewe at lambing, and fourth-order Legendre polynomials for age to represent the average growth curve. In the random part, functions of different orders were included to model variances associated with direct additive and maternal genetic effects and with permanent environmental effects of the animal and mother. Residual variance was fitted by a sixth-order ordinary polynomial for age. The higher the order of the functions, the better the model fit the data. According to the Akaike information criterion and likelihood ratio test, a continuous function of order, five, five, seven, and three for direct additive genetic, maternal genetic, animal permanent environmental, and maternal permanent environmental effects (k = 5573), respectively, was sufficient to model changes in (co)variances with age. However, a more parsimonious model of order three, three, five, and three (k = 3353) was suggested based on Schwarz's Bayesian information criterion for the same effects. Since it was a more flexible model, model k = 5573 provided inconsistent genetic parameter estimates when compared to the biologically expected result. Predicted breeding values obtained with models k = 3353 and k = 5573 differed, especially at young ages. Model k = 3353 adequately fit changes in variances and covariances with time, and may be used to describe changes in variances with age in the Santa Ines sheep studied.
publishDate 2016
dc.date.none.fl_str_mv 2016-06-23
2016
2018-01-26T23:43:14Z
2018-01-26T23:43:14Z
2018-01-26T23:43:14Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794
10.4238/gmr.15025749
identifier_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 2, Jun. 2016
10.4238/gmr.15025749
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1047794
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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