Endo- and exoglucanase activities in bacteria from mangrove sediment.
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473 |
Resumo: | The mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose. |
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Endo- and exoglucanase activities in bacteria from mangrove sediment.Cellulose, Endo-1,4-B-D-glucanaseExo-1,4-B-D-glucanasesalinityThe mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose.FABIO LINO SOARES JUNIOR, ESALQ-USP; ARMANDO CAVALCANTE FRANCO DIAS, CENA-USP; CRISTIANE CIPOLA FASANELLA, ESALQ-USP; RODRIGO GOUVEA TAKETANI; ANDRE OLIVEIRA DE SOUZA LIMA, UNIVALI; ITAMAR SOARES DE MELO, CNPMA; FERNANDO DINI ANDREOTE, ESALQ-USP.SOARES JUNIOR, F. L.DIAS, A. C. F.FASANELLA, C. C.TAKETANI, R. G.LIMA, A. O. S.MELO, I. S. deANDREOTE, F. D.2014-02-27T11:11:11Z2014-02-27T11:11:11Z2014-02-2720132014-02-28T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBrazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T00:55:56Zoai:www.alice.cnptia.embrapa.br:doc/981473Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T00:55:56falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T00:55:56Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
title |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
spellingShingle |
Endo- and exoglucanase activities in bacteria from mangrove sediment. SOARES JUNIOR, F. L. Cellulose, Endo-1,4-B-D-glucanase Exo-1,4-B-D-glucanase salinity |
title_short |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
title_full |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
title_fullStr |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
title_full_unstemmed |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
title_sort |
Endo- and exoglucanase activities in bacteria from mangrove sediment. |
author |
SOARES JUNIOR, F. L. |
author_facet |
SOARES JUNIOR, F. L. DIAS, A. C. F. FASANELLA, C. C. TAKETANI, R. G. LIMA, A. O. S. MELO, I. S. de ANDREOTE, F. D. |
author_role |
author |
author2 |
DIAS, A. C. F. FASANELLA, C. C. TAKETANI, R. G. LIMA, A. O. S. MELO, I. S. de ANDREOTE, F. D. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
FABIO LINO SOARES JUNIOR, ESALQ-USP; ARMANDO CAVALCANTE FRANCO DIAS, CENA-USP; CRISTIANE CIPOLA FASANELLA, ESALQ-USP; RODRIGO GOUVEA TAKETANI; ANDRE OLIVEIRA DE SOUZA LIMA, UNIVALI; ITAMAR SOARES DE MELO, CNPMA; FERNANDO DINI ANDREOTE, ESALQ-USP. |
dc.contributor.author.fl_str_mv |
SOARES JUNIOR, F. L. DIAS, A. C. F. FASANELLA, C. C. TAKETANI, R. G. LIMA, A. O. S. MELO, I. S. de ANDREOTE, F. D. |
dc.subject.por.fl_str_mv |
Cellulose, Endo-1,4-B-D-glucanase Exo-1,4-B-D-glucanase salinity |
topic |
Cellulose, Endo-1,4-B-D-glucanase Exo-1,4-B-D-glucanase salinity |
description |
The mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013 2014-02-27T11:11:11Z 2014-02-27T11:11:11Z 2014-02-27 2014-02-28T11:11:11Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Brazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013. http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473 |
identifier_str_mv |
Brazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503387973156864 |