Endo- and exoglucanase activities in bacteria from mangrove sediment.

Detalhes bibliográficos
Autor(a) principal: SOARES JUNIOR, F. L.
Data de Publicação: 2013
Outros Autores: DIAS, A. C. F., FASANELLA, C. C., TAKETANI, R. G., LIMA, A. O. S., MELO, I. S. de, ANDREOTE, F. D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473
Resumo: The mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose.
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spelling Endo- and exoglucanase activities in bacteria from mangrove sediment.Cellulose, Endo-1,4-B-D-glucanaseExo-1,4-B-D-glucanasesalinityThe mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose.FABIO LINO SOARES JUNIOR, ESALQ-USP; ARMANDO CAVALCANTE FRANCO DIAS, CENA-USP; CRISTIANE CIPOLA FASANELLA, ESALQ-USP; RODRIGO GOUVEA TAKETANI; ANDRE OLIVEIRA DE SOUZA LIMA, UNIVALI; ITAMAR SOARES DE MELO, CNPMA; FERNANDO DINI ANDREOTE, ESALQ-USP.SOARES JUNIOR, F. L.DIAS, A. C. F.FASANELLA, C. C.TAKETANI, R. G.LIMA, A. O. S.MELO, I. S. deANDREOTE, F. D.2014-02-27T11:11:11Z2014-02-27T11:11:11Z2014-02-2720132014-02-28T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBrazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013.http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T00:55:56Zoai:www.alice.cnptia.embrapa.br:doc/981473Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T00:55:56falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T00:55:56Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Endo- and exoglucanase activities in bacteria from mangrove sediment.
title Endo- and exoglucanase activities in bacteria from mangrove sediment.
spellingShingle Endo- and exoglucanase activities in bacteria from mangrove sediment.
SOARES JUNIOR, F. L.
Cellulose, Endo-1,4-B-D-glucanase
Exo-1,4-B-D-glucanase
salinity
title_short Endo- and exoglucanase activities in bacteria from mangrove sediment.
title_full Endo- and exoglucanase activities in bacteria from mangrove sediment.
title_fullStr Endo- and exoglucanase activities in bacteria from mangrove sediment.
title_full_unstemmed Endo- and exoglucanase activities in bacteria from mangrove sediment.
title_sort Endo- and exoglucanase activities in bacteria from mangrove sediment.
author SOARES JUNIOR, F. L.
author_facet SOARES JUNIOR, F. L.
DIAS, A. C. F.
FASANELLA, C. C.
TAKETANI, R. G.
LIMA, A. O. S.
MELO, I. S. de
ANDREOTE, F. D.
author_role author
author2 DIAS, A. C. F.
FASANELLA, C. C.
TAKETANI, R. G.
LIMA, A. O. S.
MELO, I. S. de
ANDREOTE, F. D.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv FABIO LINO SOARES JUNIOR, ESALQ-USP; ARMANDO CAVALCANTE FRANCO DIAS, CENA-USP; CRISTIANE CIPOLA FASANELLA, ESALQ-USP; RODRIGO GOUVEA TAKETANI; ANDRE OLIVEIRA DE SOUZA LIMA, UNIVALI; ITAMAR SOARES DE MELO, CNPMA; FERNANDO DINI ANDREOTE, ESALQ-USP.
dc.contributor.author.fl_str_mv SOARES JUNIOR, F. L.
DIAS, A. C. F.
FASANELLA, C. C.
TAKETANI, R. G.
LIMA, A. O. S.
MELO, I. S. de
ANDREOTE, F. D.
dc.subject.por.fl_str_mv Cellulose, Endo-1,4-B-D-glucanase
Exo-1,4-B-D-glucanase
salinity
topic Cellulose, Endo-1,4-B-D-glucanase
Exo-1,4-B-D-glucanase
salinity
description The mangrove ecosystem is an unexplored source for biotechnological applications. In this unique environment, endemic bacteria have the ability to thrive in the harsh environmental conditions (salinity and anaerobiosis), and act in the degradation of organic matter, promoting nutrient cycles. Thus, this study aimed to assess the cellulolytic activities of bacterial groups present in the sediment from amangrove located in Ilha do Cardoso (SP, Brazil). To optimize the isolation of cellulolytic bacteria,enrichments in two types of culture media (tryptone broth and minimum salt medium), both supplementedwith 5% NaCl and 1% of cellulose, were performed. Tests conducted with the obtained colonies showed a higher occurrence of endoglycolytic activity (33 isolates) than exoglycolytic (19 isolates), and the degradation activity was shown to be modulated by the presence of NaCl. The isolated bacteria were clustered by BOX-PCR and further classified on the basis of partial 16S rRNA sequences as Alphaproteobacteria, Gammaproteobacteria, Actinobacteria, Firmicutes or Bacteroidetes. Therefore, this study highlights the importance of studies focusing on the endemic species found in mangroves to exploit them as novel biotechnological tools for the degradation of cellulose.
publishDate 2013
dc.date.none.fl_str_mv 2013
2014-02-27T11:11:11Z
2014-02-27T11:11:11Z
2014-02-27
2014-02-28T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Brazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473
identifier_str_mv Brazilian Journal of Microbiology, Piracicaba, v. 44, n. 3, p. 969-976, 2013.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/981473
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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