Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.

Detalhes bibliográficos
Autor(a) principal: HENKES, L. E.
Data de Publicação: 2005
Outros Autores: SILVA JUNIOR, W. A., MORAES, J. C. F., WEIMER, T. A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1094446
Resumo: The genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.
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spelling Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.Brangus-IbageBovinoDNAMitocôndriaLinhagemThe genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.Luiz Ernani Henkes, UFRGS; Wilson Araújo Silva Junior, CTC; JOSE CARLOS FERRUGEM MORAES, CPPSUL; Tania Azevedo Weimer, UFRGS.HENKES, L. E.SILVA JUNIOR, W. A.MORAES, J. C. F.WEIMER, T. A.2018-08-24T00:54:40Z2018-08-24T00:54:40Z2018-08-2320052018-08-24T00:54:40Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Biology, v. 28, n. 1, p. 60-66, 2005.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1094446enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2018-08-24T00:54:46Zoai:www.alice.cnptia.embrapa.br:doc/1094446Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542018-08-24T00:54:46falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542018-08-24T00:54:46Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
title Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
spellingShingle Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
HENKES, L. E.
Brangus-Ibage
Bovino
DNA
Mitocôndria
Linhagem
title_short Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
title_full Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
title_fullStr Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
title_full_unstemmed Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
title_sort Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations.
author HENKES, L. E.
author_facet HENKES, L. E.
SILVA JUNIOR, W. A.
MORAES, J. C. F.
WEIMER, T. A.
author_role author
author2 SILVA JUNIOR, W. A.
MORAES, J. C. F.
WEIMER, T. A.
author2_role author
author
author
dc.contributor.none.fl_str_mv Luiz Ernani Henkes, UFRGS; Wilson Araújo Silva Junior, CTC; JOSE CARLOS FERRUGEM MORAES, CPPSUL; Tania Azevedo Weimer, UFRGS.
dc.contributor.author.fl_str_mv HENKES, L. E.
SILVA JUNIOR, W. A.
MORAES, J. C. F.
WEIMER, T. A.
dc.subject.por.fl_str_mv Brangus-Ibage
Bovino
DNA
Mitocôndria
Linhagem
topic Brangus-Ibage
Bovino
DNA
Mitocôndria
Linhagem
description The genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.
publishDate 2005
dc.date.none.fl_str_mv 2005
2018-08-24T00:54:40Z
2018-08-24T00:54:40Z
2018-08-23
2018-08-24T00:54:40Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Biology, v. 28, n. 1, p. 60-66, 2005.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1094446
identifier_str_mv Genetics and Molecular Biology, v. 28, n. 1, p. 60-66, 2005.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1094446
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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