New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.

Detalhes bibliográficos
Autor(a) principal: CASTRO, G. D. M. de
Data de Publicação: 2023
Outros Autores: VILELA, E. F., FARIA, A. L. R. de, SILVA, R. A., FERREIRA, W. P. M.
Tipo de documento: Artigo
Idioma: por
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1162117
https://doi.org/10.25186/.v18i.2170
Resumo: Coffee Rust (Hemileia vastatrix) is considered the primary coffee disease in the world. The pathogenic fungus can find favorable environmental conditions in different countries, constantly threatening coffee producers. The previous detection of the incidence of coffee rust in a region is crucial because it provides an overview of the disease’s progress aiding in coffee plantations management. The objective of this work was the development of a vegetation index for remote monitoring of coffee rust infestation. Using satellite images from the MSI/Sentinel-2 collection, the Machine Learning classifier algorithm - Random Forest, and the cloud processing platform - Google Earth Engine, the most sensitives bands in coffee rust detection were determined, namely B4 (Red), B7 (Red Edge 3) and B8A (Red Edge 4). Thus, the Triangular Vegetation Index method was used to create a new vegetative index for remote detection of coffee rust infestation on a regional scale, named Coffee Rust Detection Index (CRDI). A linear regression model was created to estimate rust infestation based on the performance of the new index. The model presented a coefficient of determination (R²) of 62.5%, and a root mean square error (RMSE) of 0.107. In addition, a comparison analysis of the new index with eight other vegetative indices commonly used in the literature was carried out. The CRDI obtained the best performance in coffee rust detection among the others. This study shows that the new index CRDI has the robustness and general capacity to be used in monitoring coffee rust infestation on a regional scale.
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spelling New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.Hemileia VastatrixDisease controlVegetation indexControl methodsCoffee Rust (Hemileia vastatrix) is considered the primary coffee disease in the world. The pathogenic fungus can find favorable environmental conditions in different countries, constantly threatening coffee producers. The previous detection of the incidence of coffee rust in a region is crucial because it provides an overview of the disease’s progress aiding in coffee plantations management. The objective of this work was the development of a vegetation index for remote monitoring of coffee rust infestation. Using satellite images from the MSI/Sentinel-2 collection, the Machine Learning classifier algorithm - Random Forest, and the cloud processing platform - Google Earth Engine, the most sensitives bands in coffee rust detection were determined, namely B4 (Red), B7 (Red Edge 3) and B8A (Red Edge 4). Thus, the Triangular Vegetation Index method was used to create a new vegetative index for remote detection of coffee rust infestation on a regional scale, named Coffee Rust Detection Index (CRDI). A linear regression model was created to estimate rust infestation based on the performance of the new index. The model presented a coefficient of determination (R²) of 62.5%, and a root mean square error (RMSE) of 0.107. In addition, a comparison analysis of the new index with eight other vegetative indices commonly used in the literature was carried out. The CRDI obtained the best performance in coffee rust detection among the others. This study shows that the new index CRDI has the robustness and general capacity to be used in monitoring coffee rust infestation on a regional scale.GABRIEL DUMBÁ MONTEIRO DE CASTRO, UNIVERSIDADE FEDERAL DE VIÇOSA; EMERSON FERREIRA VILELA, EMPRESA DE PESQUISA AGROPECUÁRIA DE MINAS GERAIS; ANA LUÍSA RIBEIRO DE FARIA, UNIVERSIDADE FEDERAL DE VIÇOSA; ROGÉRIO ANTÔNIO SILVA, EMPRESA DE PESQUISA AGROPECUÁRIA DE MINAS GERAIS; WILLIAMS PINTO MARQUES FERREIRA, CNPCa.CASTRO, G. D. M. deVILELA, E. F.FARIA, A. L. R. deSILVA, R. A.FERREIRA, W. P. M.2024-02-19T20:32:42Z2024-02-19T20:32:42Z2024-02-192023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCoffee Science, v. 18, e182170, 2023.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1162117https://doi.org/10.25186/.v18i.2170porinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2024-02-19T20:32:42Zoai:www.alice.cnptia.embrapa.br:doc/1162117Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542024-02-19T20:32:42falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542024-02-19T20:32:42Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
title New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
spellingShingle New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
CASTRO, G. D. M. de
Hemileia Vastatrix
Disease control
Vegetation index
Control methods
title_short New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
title_full New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
title_fullStr New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
title_full_unstemmed New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
title_sort New vegetation index for monitoring coffee rust using sentinel-2 multispectral imagery.
author CASTRO, G. D. M. de
author_facet CASTRO, G. D. M. de
VILELA, E. F.
FARIA, A. L. R. de
SILVA, R. A.
FERREIRA, W. P. M.
author_role author
author2 VILELA, E. F.
FARIA, A. L. R. de
SILVA, R. A.
FERREIRA, W. P. M.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv GABRIEL DUMBÁ MONTEIRO DE CASTRO, UNIVERSIDADE FEDERAL DE VIÇOSA; EMERSON FERREIRA VILELA, EMPRESA DE PESQUISA AGROPECUÁRIA DE MINAS GERAIS; ANA LUÍSA RIBEIRO DE FARIA, UNIVERSIDADE FEDERAL DE VIÇOSA; ROGÉRIO ANTÔNIO SILVA, EMPRESA DE PESQUISA AGROPECUÁRIA DE MINAS GERAIS; WILLIAMS PINTO MARQUES FERREIRA, CNPCa.
dc.contributor.author.fl_str_mv CASTRO, G. D. M. de
VILELA, E. F.
FARIA, A. L. R. de
SILVA, R. A.
FERREIRA, W. P. M.
dc.subject.por.fl_str_mv Hemileia Vastatrix
Disease control
Vegetation index
Control methods
topic Hemileia Vastatrix
Disease control
Vegetation index
Control methods
description Coffee Rust (Hemileia vastatrix) is considered the primary coffee disease in the world. The pathogenic fungus can find favorable environmental conditions in different countries, constantly threatening coffee producers. The previous detection of the incidence of coffee rust in a region is crucial because it provides an overview of the disease’s progress aiding in coffee plantations management. The objective of this work was the development of a vegetation index for remote monitoring of coffee rust infestation. Using satellite images from the MSI/Sentinel-2 collection, the Machine Learning classifier algorithm - Random Forest, and the cloud processing platform - Google Earth Engine, the most sensitives bands in coffee rust detection were determined, namely B4 (Red), B7 (Red Edge 3) and B8A (Red Edge 4). Thus, the Triangular Vegetation Index method was used to create a new vegetative index for remote detection of coffee rust infestation on a regional scale, named Coffee Rust Detection Index (CRDI). A linear regression model was created to estimate rust infestation based on the performance of the new index. The model presented a coefficient of determination (R²) of 62.5%, and a root mean square error (RMSE) of 0.107. In addition, a comparison analysis of the new index with eight other vegetative indices commonly used in the literature was carried out. The CRDI obtained the best performance in coffee rust detection among the others. This study shows that the new index CRDI has the robustness and general capacity to be used in monitoring coffee rust infestation on a regional scale.
publishDate 2023
dc.date.none.fl_str_mv 2023
2024-02-19T20:32:42Z
2024-02-19T20:32:42Z
2024-02-19
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Coffee Science, v. 18, e182170, 2023.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1162117
https://doi.org/10.25186/.v18i.2170
identifier_str_mv Coffee Science, v. 18, e182170, 2023.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1162117
https://doi.org/10.25186/.v18i.2170
dc.language.iso.fl_str_mv por
language por
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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