Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144 http://dx.doi.org/10.1590/1984-70332016v16n1a5 |
Resumo: | Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts |
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Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia.Recursos genéticosMacaxeiraBanco de GermoplasmaManihot EsculentaMandiocacassavagenetic resourcesGenetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding effortsELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU.CUNHA, E. F. M.SILVA, C. R. de S.ALBUQUERQUE, P. S. B. deRAMALHO, G. F.PONTES, L. C. G.FARIAS NETO, J. T. de2016-06-02T11:11:11Z2016-06-02T11:11:11Z2016-06-0220162017-09-28T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCrop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144http://dx.doi.org/10.1590/1984-70332016v16n1a5enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T03:42:23Zoai:www.alice.cnptia.embrapa.br:doc/1046144Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T03:42:23Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
title |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
spellingShingle |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. CUNHA, E. F. M. Recursos genéticos Macaxeira Banco de Germoplasma Manihot Esculenta Mandioca cassava genetic resources |
title_short |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
title_full |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
title_fullStr |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
title_full_unstemmed |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
title_sort |
Molecular characterization of 'sweet' cassavas (Manihot esculenta) from a germplasm bank in Brazilian Eastern Amazonia. |
author |
CUNHA, E. F. M. |
author_facet |
CUNHA, E. F. M. SILVA, C. R. de S. ALBUQUERQUE, P. S. B. de RAMALHO, G. F. PONTES, L. C. G. FARIAS NETO, J. T. de |
author_role |
author |
author2 |
SILVA, C. R. de S. ALBUQUERQUE, P. S. B. de RAMALHO, G. F. PONTES, L. C. G. FARIAS NETO, J. T. de |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
ELISA FERREIRA MOURA CUNHA, CPATU; Carlos Rogério de Sousa Silva, Comissão Executiva do Plano da Lavoura Cacaueira; Paulo Sérgio Bevilaqua de Albuquerque, Comissão Executiva do Plano da Lavoura Cacaueira; Girena Fernandes Ramalho, UFPA; Lígia Cristine Gonçalves Pontes, UFPA; JOAO TOME DE FARIAS NETO, CPATU. |
dc.contributor.author.fl_str_mv |
CUNHA, E. F. M. SILVA, C. R. de S. ALBUQUERQUE, P. S. B. de RAMALHO, G. F. PONTES, L. C. G. FARIAS NETO, J. T. de |
dc.subject.por.fl_str_mv |
Recursos genéticos Macaxeira Banco de Germoplasma Manihot Esculenta Mandioca cassava genetic resources |
topic |
Recursos genéticos Macaxeira Banco de Germoplasma Manihot Esculenta Mandioca cassava genetic resources |
description |
Genetic variability of a set of 81 accessions of ?sweet? cassavas (Manihot esculenta) collected mostly in the North region of Brazil was investigated with nine microsatellite loci. All loci were polymorphic, with mean of 6.33 alleles per locus. Analyses indicated that 35 multiloci profiles were represented by a single accession, and 46 showed non-unique profiles, represented by eleven genotypes. Forty-six different multiloci profiles were detected. Most of the putative duplicated accessions were collected in different locations. After the removal of putative duplicated genotypes, genetic parameters were estimated and expected heterozygosity was high (HE=0.73), indicating genetic variability. Structure analysis of this set of ?sweet? cassavas divided the 46 genotypes into two clusters (K=2), and a few genotypes had mixed ancestry. Results indicated the habit of exchange of materials among farmers of the North region of Brazil, and the genetic variability to be exploited in genetic breeding efforts |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-06-02T11:11:11Z 2016-06-02T11:11:11Z 2016-06-02 2016 2017-09-28T11:11:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Crop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144 http://dx.doi.org/10.1590/1984-70332016v16n1a5 |
identifier_str_mv |
Crop Breeding and Applied Biotechnology, v. 16, n. 1, p. 28-34, 2016. |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1046144 http://dx.doi.org/10.1590/1984-70332016v16n1a5 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
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EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1822721199738716160 |