Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools

Detalhes bibliográficos
Autor(a) principal: Palasio,Raquel Gardini Sanches
Data de Publicação: 2019
Outros Autores: Xavier,Iara Giordano, Chiaravalotti-Neto,Francisco, Tuan,Roseli
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Biota Neotropica
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032019000400206
Resumo: Abstract: The Middle Paranapanema River region of São Paulo, Brazil is home to significant diversity of Biomphalaria species and is very vulnerable to health and environmental impacts such as schistosomiasis. This study updates freshwater malacological surveys for ecosystems in one portion of the Middle Paranapanema River Basin, with emphasis on the genus Biomphalaria. Snails were collected from 114 distinct bodies of water between 2015 and 2018. Biomphalaria specimens were identified according to morphological and molecular characteristics, while animals in other genera (Drepanotrema, Lymnaea, Melanoides, Physa and Pomacea) were identified solely according to shell characteristics. A geographic information system was used to update intermediate host colonization sites and consequently assist in identifying probable hotspots for intermediate hosts of schistosomiasis. The sequences of the COI gene relating to the DNA barcode stretch were tested for similarity against sequences found in GenBank, for monophyly through Maximum Likelihood phylogenetic inference, and analyzed in ABDG, bPTP and GMYC for the delimitation of putative species. Of the 10,722 snails collected, 86.7% were in the Planorbidae family (75.5% Biomphalaria and 11.2% Drepanotrema) and 13.3% were other non-Planorbidae species (Lymnaea, Melanoides, Physa and Pomacea). The taxonomic COI reference sequences in the NCBI nucleotide database used for DNA sequence comparison, and phylogenetic analysis used to test the monophyly of the groups, resulted in more reliable taxonomic units than delimitation of the COI sequences in MOTUs using statistical taxonomic models. Analysis of the species distribution shows that B. glabrata and B. tenagophila are heterogeneously distributed in the study area. B. glabrata colonizes only five water bodies, in the study area, most of them in Ourinhos, while B. tenagophila predominates in water bodies in Ipaussu. Contrasting with this, B. straminea, B. occidentalis and B. peregrina are evenly distributed throughout the study area.
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spelling Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis toolsBiomphalariafreshwater snailsbiodiversityDNA barcodedistributionAbstract: The Middle Paranapanema River region of São Paulo, Brazil is home to significant diversity of Biomphalaria species and is very vulnerable to health and environmental impacts such as schistosomiasis. This study updates freshwater malacological surveys for ecosystems in one portion of the Middle Paranapanema River Basin, with emphasis on the genus Biomphalaria. Snails were collected from 114 distinct bodies of water between 2015 and 2018. Biomphalaria specimens were identified according to morphological and molecular characteristics, while animals in other genera (Drepanotrema, Lymnaea, Melanoides, Physa and Pomacea) were identified solely according to shell characteristics. A geographic information system was used to update intermediate host colonization sites and consequently assist in identifying probable hotspots for intermediate hosts of schistosomiasis. The sequences of the COI gene relating to the DNA barcode stretch were tested for similarity against sequences found in GenBank, for monophyly through Maximum Likelihood phylogenetic inference, and analyzed in ABDG, bPTP and GMYC for the delimitation of putative species. Of the 10,722 snails collected, 86.7% were in the Planorbidae family (75.5% Biomphalaria and 11.2% Drepanotrema) and 13.3% were other non-Planorbidae species (Lymnaea, Melanoides, Physa and Pomacea). The taxonomic COI reference sequences in the NCBI nucleotide database used for DNA sequence comparison, and phylogenetic analysis used to test the monophyly of the groups, resulted in more reliable taxonomic units than delimitation of the COI sequences in MOTUs using statistical taxonomic models. Analysis of the species distribution shows that B. glabrata and B. tenagophila are heterogeneously distributed in the study area. B. glabrata colonizes only five water bodies, in the study area, most of them in Ourinhos, while B. tenagophila predominates in water bodies in Ipaussu. Contrasting with this, B. straminea, B. occidentalis and B. peregrina are evenly distributed throughout the study area.Instituto Virtual da Biodiversidade | BIOTA - FAPESP2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032019000400206Biota Neotropica v.19 n.4 2019reponame:Biota Neotropicainstname:Instituto Virtual da Biodiversidade (BIOTA-FAPESP)instacron:BIOTA - FAPESP10.1590/1676-0611-bn-2019-0746info:eu-repo/semantics/openAccessPalasio,Raquel Gardini SanchesXavier,Iara GiordanoChiaravalotti-Neto,FranciscoTuan,Roselieng2019-09-04T00:00:00Zoai:scielo:S1676-06032019000400206Revistahttps://www.biotaneotropica.org.br/v20n1/pt/https://old.scielo.br/oai/scielo-oai.php||juliosa@unifap.br1676-06111676-0611opendoar:2019-09-04T00:00Biota Neotropica - Instituto Virtual da Biodiversidade (BIOTA-FAPESP)false
dc.title.none.fl_str_mv Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
title Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
spellingShingle Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
Palasio,Raquel Gardini Sanches
Biomphalaria
freshwater snails
biodiversity
DNA barcode
distribution
title_short Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
title_full Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
title_fullStr Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
title_full_unstemmed Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
title_sort Diversity of Biomphalaria spp. freshwater snails and associated mollusks in areas with schistosomiasis risk, using molecular and spatial analysis tools
author Palasio,Raquel Gardini Sanches
author_facet Palasio,Raquel Gardini Sanches
Xavier,Iara Giordano
Chiaravalotti-Neto,Francisco
Tuan,Roseli
author_role author
author2 Xavier,Iara Giordano
Chiaravalotti-Neto,Francisco
Tuan,Roseli
author2_role author
author
author
dc.contributor.author.fl_str_mv Palasio,Raquel Gardini Sanches
Xavier,Iara Giordano
Chiaravalotti-Neto,Francisco
Tuan,Roseli
dc.subject.por.fl_str_mv Biomphalaria
freshwater snails
biodiversity
DNA barcode
distribution
topic Biomphalaria
freshwater snails
biodiversity
DNA barcode
distribution
description Abstract: The Middle Paranapanema River region of São Paulo, Brazil is home to significant diversity of Biomphalaria species and is very vulnerable to health and environmental impacts such as schistosomiasis. This study updates freshwater malacological surveys for ecosystems in one portion of the Middle Paranapanema River Basin, with emphasis on the genus Biomphalaria. Snails were collected from 114 distinct bodies of water between 2015 and 2018. Biomphalaria specimens were identified according to morphological and molecular characteristics, while animals in other genera (Drepanotrema, Lymnaea, Melanoides, Physa and Pomacea) were identified solely according to shell characteristics. A geographic information system was used to update intermediate host colonization sites and consequently assist in identifying probable hotspots for intermediate hosts of schistosomiasis. The sequences of the COI gene relating to the DNA barcode stretch were tested for similarity against sequences found in GenBank, for monophyly through Maximum Likelihood phylogenetic inference, and analyzed in ABDG, bPTP and GMYC for the delimitation of putative species. Of the 10,722 snails collected, 86.7% were in the Planorbidae family (75.5% Biomphalaria and 11.2% Drepanotrema) and 13.3% were other non-Planorbidae species (Lymnaea, Melanoides, Physa and Pomacea). The taxonomic COI reference sequences in the NCBI nucleotide database used for DNA sequence comparison, and phylogenetic analysis used to test the monophyly of the groups, resulted in more reliable taxonomic units than delimitation of the COI sequences in MOTUs using statistical taxonomic models. Analysis of the species distribution shows that B. glabrata and B. tenagophila are heterogeneously distributed in the study area. B. glabrata colonizes only five water bodies, in the study area, most of them in Ourinhos, while B. tenagophila predominates in water bodies in Ipaussu. Contrasting with this, B. straminea, B. occidentalis and B. peregrina are evenly distributed throughout the study area.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032019000400206
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1676-06032019000400206
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1676-0611-bn-2019-0746
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Virtual da Biodiversidade | BIOTA - FAPESP
publisher.none.fl_str_mv Instituto Virtual da Biodiversidade | BIOTA - FAPESP
dc.source.none.fl_str_mv Biota Neotropica v.19 n.4 2019
reponame:Biota Neotropica
instname:Instituto Virtual da Biodiversidade (BIOTA-FAPESP)
instacron:BIOTA - FAPESP
instname_str Instituto Virtual da Biodiversidade (BIOTA-FAPESP)
instacron_str BIOTA - FAPESP
institution BIOTA - FAPESP
reponame_str Biota Neotropica
collection Biota Neotropica
repository.name.fl_str_mv Biota Neotropica - Instituto Virtual da Biodiversidade (BIOTA-FAPESP)
repository.mail.fl_str_mv ||juliosa@unifap.br
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