Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FURG (RI FURG) |
Texto Completo: | http://repositorio.furg.br/handle/1/7053 |
Resumo: | To evaluate antiretroviral phenotypic susceptibility of wild-type HIV-1 strains circulating in Brazil, samples from antiretroviral-naïve individuals infected with subtypes C (n=16), F (n=9), or B/F (n=7), where reverse transcriptase is B and protease is F, were phenotyped using the AntivirogramTM Assay (Virco, Mechelen, Belgium). Reduced susceptibility to protease inhibitors (PIs) was observed in one C and three F isolates. None of these samples had any known PI resistance mutations. The Phenotypic Fold Change to one PI was above the biologic cut-off in 3 of 96 (3.1%) of clade F phenotypic determinations and 1 of 96 (1.0%) of C. Phenotypic resistance to at least one nucleoside reverse transcriptase inhibitor (NRTI) was found for two B/F, four C, and three F isolates. The Phenotypic Fold Change in susceptibility to NRTIs was above the cut-off value in 9 of 111 (8.1%) of clade C determinations, as compared to 3 of 63 (4.8%) for clade F and 2 of 49 (4.1%) for clade B. The Phenotypic Fold Change to non-NRTI (NNRTI) was above the cut-off in 7 of 32 (21.9%) of C isolates determinations, whereas none of the F isolates had decrease of susceptibility. Only two of the sixteen C samples had a known NNRTI resistance mutation. The NNRTI Fold Change was above the cut-off value in 3 of 14 (21.4%) of phenotypic determination of Brazilian B/F recombinants, representing clade B reverse transcriptase. NNRTI susceptibility should be better investigated in clade C and B/F recombinants. |
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Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 StrainsHIV-1 subtypePhenotypic susceptibilityAntiretroviral naïveBrazilTo evaluate antiretroviral phenotypic susceptibility of wild-type HIV-1 strains circulating in Brazil, samples from antiretroviral-naïve individuals infected with subtypes C (n=16), F (n=9), or B/F (n=7), where reverse transcriptase is B and protease is F, were phenotyped using the AntivirogramTM Assay (Virco, Mechelen, Belgium). Reduced susceptibility to protease inhibitors (PIs) was observed in one C and three F isolates. None of these samples had any known PI resistance mutations. The Phenotypic Fold Change to one PI was above the biologic cut-off in 3 of 96 (3.1%) of clade F phenotypic determinations and 1 of 96 (1.0%) of C. Phenotypic resistance to at least one nucleoside reverse transcriptase inhibitor (NRTI) was found for two B/F, four C, and three F isolates. The Phenotypic Fold Change in susceptibility to NRTIs was above the cut-off value in 9 of 111 (8.1%) of clade C determinations, as compared to 3 of 63 (4.8%) for clade F and 2 of 49 (4.1%) for clade B. The Phenotypic Fold Change to non-NRTI (NNRTI) was above the cut-off in 7 of 32 (21.9%) of C isolates determinations, whereas none of the F isolates had decrease of susceptibility. Only two of the sixteen C samples had a known NNRTI resistance mutation. The NNRTI Fold Change was above the cut-off value in 3 of 14 (21.4%) of phenotypic determination of Brazilian B/F recombinants, representing clade B reverse transcriptase. NNRTI susceptibility should be better investigated in clade C and B/F recombinants.2017-02-03T01:31:50Z2017-02-03T01:31:50Z2013info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfSUCUPIRA, Maria Cecilia Araripe et al. Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains. AIDS Research and Human Retroviruses, v. 29, n. 6, p. 880-886, 2013. Disponível em: <https://www.researchgate.net/publication/235519863_Phenotypic_Susceptibility_to_Antiretrovirals_among_Clades_C_F_and_BF_Recombinant_Antiretroviral-Naive_HIV-1_Strains>. Acesso em: 02 fev. 2017.0889-2229http://repositorio.furg.br/handle/1/705310.1089/AID.2012.0259engSucupira, Maria Cecilia AraripeMunerato, PatriciaSilveira, Jussara MariaSantos, André Felipe Andrade dosJanini, Luiz MárioSoares, Marcelo AlvesDiaz, Ricardo Sobhieinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FURG (RI FURG)instname:Universidade Federal do Rio Grande (FURG)instacron:FURG2022-10-20T19:49:16Zoai:repositorio.furg.br:1/7053Repositório InstitucionalPUBhttps://repositorio.furg.br/oai/request || http://200.19.254.174/oai/requestopendoar:2022-10-20T19:49:16Repositório Institucional da FURG (RI FURG) - Universidade Federal do Rio Grande (FURG)false |
dc.title.none.fl_str_mv |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
title |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
spellingShingle |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains Sucupira, Maria Cecilia Araripe HIV-1 subtype Phenotypic susceptibility Antiretroviral naïve Brazil |
title_short |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
title_full |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
title_fullStr |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
title_full_unstemmed |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
title_sort |
Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains |
author |
Sucupira, Maria Cecilia Araripe |
author_facet |
Sucupira, Maria Cecilia Araripe Munerato, Patricia Silveira, Jussara Maria Santos, André Felipe Andrade dos Janini, Luiz Mário Soares, Marcelo Alves Diaz, Ricardo Sobhie |
author_role |
author |
author2 |
Munerato, Patricia Silveira, Jussara Maria Santos, André Felipe Andrade dos Janini, Luiz Mário Soares, Marcelo Alves Diaz, Ricardo Sobhie |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Sucupira, Maria Cecilia Araripe Munerato, Patricia Silveira, Jussara Maria Santos, André Felipe Andrade dos Janini, Luiz Mário Soares, Marcelo Alves Diaz, Ricardo Sobhie |
dc.subject.por.fl_str_mv |
HIV-1 subtype Phenotypic susceptibility Antiretroviral naïve Brazil |
topic |
HIV-1 subtype Phenotypic susceptibility Antiretroviral naïve Brazil |
description |
To evaluate antiretroviral phenotypic susceptibility of wild-type HIV-1 strains circulating in Brazil, samples from antiretroviral-naïve individuals infected with subtypes C (n=16), F (n=9), or B/F (n=7), where reverse transcriptase is B and protease is F, were phenotyped using the AntivirogramTM Assay (Virco, Mechelen, Belgium). Reduced susceptibility to protease inhibitors (PIs) was observed in one C and three F isolates. None of these samples had any known PI resistance mutations. The Phenotypic Fold Change to one PI was above the biologic cut-off in 3 of 96 (3.1%) of clade F phenotypic determinations and 1 of 96 (1.0%) of C. Phenotypic resistance to at least one nucleoside reverse transcriptase inhibitor (NRTI) was found for two B/F, four C, and three F isolates. The Phenotypic Fold Change in susceptibility to NRTIs was above the cut-off value in 9 of 111 (8.1%) of clade C determinations, as compared to 3 of 63 (4.8%) for clade F and 2 of 49 (4.1%) for clade B. The Phenotypic Fold Change to non-NRTI (NNRTI) was above the cut-off in 7 of 32 (21.9%) of C isolates determinations, whereas none of the F isolates had decrease of susceptibility. Only two of the sixteen C samples had a known NNRTI resistance mutation. The NNRTI Fold Change was above the cut-off value in 3 of 14 (21.4%) of phenotypic determination of Brazilian B/F recombinants, representing clade B reverse transcriptase. NNRTI susceptibility should be better investigated in clade C and B/F recombinants. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013 2017-02-03T01:31:50Z 2017-02-03T01:31:50Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
SUCUPIRA, Maria Cecilia Araripe et al. Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains. AIDS Research and Human Retroviruses, v. 29, n. 6, p. 880-886, 2013. Disponível em: <https://www.researchgate.net/publication/235519863_Phenotypic_Susceptibility_to_Antiretrovirals_among_Clades_C_F_and_BF_Recombinant_Antiretroviral-Naive_HIV-1_Strains>. Acesso em: 02 fev. 2017. 0889-2229 http://repositorio.furg.br/handle/1/7053 10.1089/AID.2012.0259 |
identifier_str_mv |
SUCUPIRA, Maria Cecilia Araripe et al. Phenotypic Susceptibility to Antiretrovirals Among Clades C, F, and B/F Recombinant Antiretroviral-Naive HIV Type 1 Strains. AIDS Research and Human Retroviruses, v. 29, n. 6, p. 880-886, 2013. Disponível em: <https://www.researchgate.net/publication/235519863_Phenotypic_Susceptibility_to_Antiretrovirals_among_Clades_C_F_and_BF_Recombinant_Antiretroviral-Naive_HIV-1_Strains>. Acesso em: 02 fev. 2017. 0889-2229 10.1089/AID.2012.0259 |
url |
http://repositorio.furg.br/handle/1/7053 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
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info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
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application/pdf |
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reponame:Repositório Institucional da FURG (RI FURG) instname:Universidade Federal do Rio Grande (FURG) instacron:FURG |
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Universidade Federal do Rio Grande (FURG) |
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Repositório Institucional da FURG (RI FURG) |
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Repositório Institucional da FURG (RI FURG) |
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Repositório Institucional da FURG (RI FURG) - Universidade Federal do Rio Grande (FURG) |
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