Interactive key (Lucid) for identification of fungi in vegetable seeds

Detalhes bibliográficos
Autor(a) principal: Pierozzi,Caroline Geraldi
Data de Publicação: 2020
Outros Autores: Fujihara,Ricardo Toshio, Souza,Efrain de Santana, Pizetta,Marília, Sartori,Maria Márcia Pereira, Kronka,Adriana Zanin
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Summa phytopathologica (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014
Resumo: ABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/.
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spelling Interactive key (Lucid) for identification of fungi in vegetable seedsID keyseed pathologyteachingfungal characteristicsphotographsABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/.Grupo Paulista de Fitopatologia2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014Summa Phytopathologica v.46 n.1 2020reponame:Summa phytopathologica (Online)instname:Grupo Paulista de Fitopatologiainstacron:GPF10.1590/0100-5405/204669info:eu-repo/semantics/openAccessPierozzi,Caroline GeraldiFujihara,Ricardo ToshioSouza,Efrain de SantanaPizetta,MaríliaSartori,Maria Márcia PereiraKronka,Adriana Zanineng2020-04-30T00:00:00Zoai:scielo:S0100-54052020000100014Revistahttp://www.scielo.br/sphttps://old.scielo.br/oai/scielo-oai.phpsumma@fca.unesp.br1980-54540100-5405opendoar:2020-04-30T00:00Summa phytopathologica (Online) - Grupo Paulista de Fitopatologiafalse
dc.title.none.fl_str_mv Interactive key (Lucid) for identification of fungi in vegetable seeds
title Interactive key (Lucid) for identification of fungi in vegetable seeds
spellingShingle Interactive key (Lucid) for identification of fungi in vegetable seeds
Pierozzi,Caroline Geraldi
ID key
seed pathology
teaching
fungal characteristics
photographs
title_short Interactive key (Lucid) for identification of fungi in vegetable seeds
title_full Interactive key (Lucid) for identification of fungi in vegetable seeds
title_fullStr Interactive key (Lucid) for identification of fungi in vegetable seeds
title_full_unstemmed Interactive key (Lucid) for identification of fungi in vegetable seeds
title_sort Interactive key (Lucid) for identification of fungi in vegetable seeds
author Pierozzi,Caroline Geraldi
author_facet Pierozzi,Caroline Geraldi
Fujihara,Ricardo Toshio
Souza,Efrain de Santana
Pizetta,Marília
Sartori,Maria Márcia Pereira
Kronka,Adriana Zanin
author_role author
author2 Fujihara,Ricardo Toshio
Souza,Efrain de Santana
Pizetta,Marília
Sartori,Maria Márcia Pereira
Kronka,Adriana Zanin
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Pierozzi,Caroline Geraldi
Fujihara,Ricardo Toshio
Souza,Efrain de Santana
Pizetta,Marília
Sartori,Maria Márcia Pereira
Kronka,Adriana Zanin
dc.subject.por.fl_str_mv ID key
seed pathology
teaching
fungal characteristics
photographs
topic ID key
seed pathology
teaching
fungal characteristics
photographs
description ABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0100-5405/204669
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
publisher.none.fl_str_mv Grupo Paulista de Fitopatologia
dc.source.none.fl_str_mv Summa Phytopathologica v.46 n.1 2020
reponame:Summa phytopathologica (Online)
instname:Grupo Paulista de Fitopatologia
instacron:GPF
instname_str Grupo Paulista de Fitopatologia
instacron_str GPF
institution GPF
reponame_str Summa phytopathologica (Online)
collection Summa phytopathologica (Online)
repository.name.fl_str_mv Summa phytopathologica (Online) - Grupo Paulista de Fitopatologia
repository.mail.fl_str_mv summa@fca.unesp.br
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