Interactive key (Lucid) for identification of fungi in vegetable seeds
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Summa phytopathologica (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014 |
Resumo: | ABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/. |
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Interactive key (Lucid) for identification of fungi in vegetable seedsID keyseed pathologyteachingfungal characteristicsphotographsABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/.Grupo Paulista de Fitopatologia2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014Summa Phytopathologica v.46 n.1 2020reponame:Summa phytopathologica (Online)instname:Grupo Paulista de Fitopatologiainstacron:GPF10.1590/0100-5405/204669info:eu-repo/semantics/openAccessPierozzi,Caroline GeraldiFujihara,Ricardo ToshioSouza,Efrain de SantanaPizetta,MaríliaSartori,Maria Márcia PereiraKronka,Adriana Zanineng2020-04-30T00:00:00Zoai:scielo:S0100-54052020000100014Revistahttp://www.scielo.br/sphttps://old.scielo.br/oai/scielo-oai.phpsumma@fca.unesp.br1980-54540100-5405opendoar:2020-04-30T00:00Summa phytopathologica (Online) - Grupo Paulista de Fitopatologiafalse |
dc.title.none.fl_str_mv |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
title |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
spellingShingle |
Interactive key (Lucid) for identification of fungi in vegetable seeds Pierozzi,Caroline Geraldi ID key seed pathology teaching fungal characteristics photographs |
title_short |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
title_full |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
title_fullStr |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
title_full_unstemmed |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
title_sort |
Interactive key (Lucid) for identification of fungi in vegetable seeds |
author |
Pierozzi,Caroline Geraldi |
author_facet |
Pierozzi,Caroline Geraldi Fujihara,Ricardo Toshio Souza,Efrain de Santana Pizetta,Marília Sartori,Maria Márcia Pereira Kronka,Adriana Zanin |
author_role |
author |
author2 |
Fujihara,Ricardo Toshio Souza,Efrain de Santana Pizetta,Marília Sartori,Maria Márcia Pereira Kronka,Adriana Zanin |
author2_role |
author author author author author |
dc.contributor.author.fl_str_mv |
Pierozzi,Caroline Geraldi Fujihara,Ricardo Toshio Souza,Efrain de Santana Pizetta,Marília Sartori,Maria Márcia Pereira Kronka,Adriana Zanin |
dc.subject.por.fl_str_mv |
ID key seed pathology teaching fungal characteristics photographs |
topic |
ID key seed pathology teaching fungal characteristics photographs |
description |
ABSTRACT Interactive keys are tools that aid research and technical work since identification of organisms has become increasingly present in the scientific and academic context. An interactive key was developed with the software Lucid v. 3.3 for the identification of eleven fungal species associated with onion, carrot, pepper and tomato seeds. It was based on a matrix composed of six features: crop, conidium, conidiophore, color of long conidiophore, color of mycelium and presence of setae, besides 21 character states. In addition, descriptions, illustrations and high-resolution photographs of the morphological characters and states were made available to aid in the correct identification of fungal species. Validation of the interactive key was performed by distinct groups of volunteers: (i) graduate students with prior knowledge and using the interactive key; (ii) undergraduate students with little prior knowledge and using the interactive key, and (iii) undergraduate students with little prior knowledge and using the conventional identification system such as the printed manuals used in seed pathology laboratories. We analyzed the time spent by each volunteer to evaluate 25 seeds infected with the fungal species in the key, as well as the percentage of success and the difficulty level for each participant. The high percentage of correct answers with the use of the interactive key and the ease of use by the volunteers confirmed its efficiency because there was an increase in the identification accuracy when compared to the conventional system. Furthermore, the rate of success and the difficulty level presented low variability within groups (i) and (ii). These results are a consequence of the interaction of the user with characteristics of the developed tool, such as high-resolution photographs, which faithfully reproduce the fungal characteristics observed in the seeds under a stereomicroscope. Thus, the interactive key presented here can aid in teaching, institutional and commercial research, inspection and certification of seeds, making diagnosis safer and more accurate. The key is available for free at https://keys.lucidcentral.org/keys/v3/seed_fungi/. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-54052020000100014 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/0100-5405/204669 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Grupo Paulista de Fitopatologia |
publisher.none.fl_str_mv |
Grupo Paulista de Fitopatologia |
dc.source.none.fl_str_mv |
Summa Phytopathologica v.46 n.1 2020 reponame:Summa phytopathologica (Online) instname:Grupo Paulista de Fitopatologia instacron:GPF |
instname_str |
Grupo Paulista de Fitopatologia |
instacron_str |
GPF |
institution |
GPF |
reponame_str |
Summa phytopathologica (Online) |
collection |
Summa phytopathologica (Online) |
repository.name.fl_str_mv |
Summa phytopathologica (Online) - Grupo Paulista de Fitopatologia |
repository.mail.fl_str_mv |
summa@fca.unesp.br |
_version_ |
1754193419725438976 |