A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil
Autor(a) principal: | |
---|---|
Data de Publicação: | 2020 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Bragantia |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407 |
Resumo: | ABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed. |
id |
IAC-1_6e0527943fa3125fd3e6e886a95f05fc |
---|---|
oai_identifier_str |
oai:scielo:S0006-87052020000300407 |
network_acronym_str |
IAC-1 |
network_name_str |
Bragantia |
repository_id_str |
|
spelling |
A survey of RNA genome viruses in Lima bean crops of Northeastern BrazilcarlaviruscomoviruscucumovirusPhaseolus lunatuspotyvirusvirus identificationABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed.Instituto Agronômico de Campinas2020-09-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407Bragantia v.79 n.3 2020reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.20190467info:eu-repo/semantics/openAccessMedeiros,Layla de Sá AndradeOliveira,Izaías Araújo deKitajima,Elliot WatanabeEiras,MarceloPereira,Helen JesusRibeiro,Simone GraçaMatos,Kedma da SilvaBeserra Júnior,José Evando Aguiareng2020-08-31T00:00:00Zoai:scielo:S0006-87052020000300407Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2020-08-31T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false |
dc.title.none.fl_str_mv |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
title |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
spellingShingle |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil Medeiros,Layla de Sá Andrade carlavirus comovirus cucumovirus Phaseolus lunatus potyvirus virus identification |
title_short |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
title_full |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
title_fullStr |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
title_full_unstemmed |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
title_sort |
A survey of RNA genome viruses in Lima bean crops of Northeastern Brazil |
author |
Medeiros,Layla de Sá Andrade |
author_facet |
Medeiros,Layla de Sá Andrade Oliveira,Izaías Araújo de Kitajima,Elliot Watanabe Eiras,Marcelo Pereira,Helen Jesus Ribeiro,Simone Graça Matos,Kedma da Silva Beserra Júnior,José Evando Aguiar |
author_role |
author |
author2 |
Oliveira,Izaías Araújo de Kitajima,Elliot Watanabe Eiras,Marcelo Pereira,Helen Jesus Ribeiro,Simone Graça Matos,Kedma da Silva Beserra Júnior,José Evando Aguiar |
author2_role |
author author author author author author author |
dc.contributor.author.fl_str_mv |
Medeiros,Layla de Sá Andrade Oliveira,Izaías Araújo de Kitajima,Elliot Watanabe Eiras,Marcelo Pereira,Helen Jesus Ribeiro,Simone Graça Matos,Kedma da Silva Beserra Júnior,José Evando Aguiar |
dc.subject.por.fl_str_mv |
carlavirus comovirus cucumovirus Phaseolus lunatus potyvirus virus identification |
topic |
carlavirus comovirus cucumovirus Phaseolus lunatus potyvirus virus identification |
description |
ABSTRACT Lima bean plants showing mosaic and leaf distortion symptoms, similar to those induced by viruses, were observed in several production areas in the states of Ceará and Piauí, Northeastern Brazil. The aim of this study was to identify RNA genome viruses that infect lima bean. Field research was conducted from 2017 to 2018. Fifty-five symptomatic samples were randomly collected from seven properties in five municipalities and tested by RT-PCR and DNA sequencing with specific or universal primers for two viruses and two virus groups. Four virus species were identified: cucumber mosaic virus (CMV), cowpea mild mottle virus (CPMMV), cowpea aphid-borne mosaic virus (CABMV) and cowpea severe mosaic virus (CPSMV), which had infection levels of 21.8, 52.7, 47.2, and 1.8%, respectively, as well as double and triple infections. The CMV isolates belonged to subgroup IA. The CPMMV isolates had high nucleotide identity with CPMMV isolates from Brazil, USA and Mexico. The CABMV isolates showed moderate nucleotide identity with Brazilian isolates. Only one sample was infected with CPSMV. This is the first record of CPMMV and CPSMV naturally infecting lima bean. Approaches to virus control are discussed. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-09-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000300407 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4499.20190467 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto Agronômico de Campinas |
publisher.none.fl_str_mv |
Instituto Agronômico de Campinas |
dc.source.none.fl_str_mv |
Bragantia v.79 n.3 2020 reponame:Bragantia instname:Instituto Agronômico de Campinas (IAC) instacron:IAC |
instname_str |
Instituto Agronômico de Campinas (IAC) |
instacron_str |
IAC |
institution |
IAC |
reponame_str |
Bragantia |
collection |
Bragantia |
repository.name.fl_str_mv |
Bragantia - Instituto Agronômico de Campinas (IAC) |
repository.mail.fl_str_mv |
bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br |
_version_ |
1754193307837136896 |