Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding

Detalhes bibliográficos
Autor(a) principal: Miah,Gous
Data de Publicação: 2015
Outros Autores: Rafii,Mohd Y., Ismail,Mohd Razi, Puteh,Adam Bin, Rahim,Harun Abdul, Ashkani,Sadegh, Latif,Abdul
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Bragantia
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052015000100033
Resumo: The BC2F1 population was derived from a cross between rice variety, MR219 (susceptible to blast) and Pongsu Seribu 1 (resistant to blast). The objectives of this research were to know the inheritance pattern of blast resistance and to identify the linked markers associated with blast resistance in BC2F1 population. Sixteen microsatellite markers were found as polymorphic between the parents related to blast resistant genes (Pi-genes). Among the selected blast resistant linked markers, two markers RM6836 and RM8225 showed expected testcross ratio (1:1) for single-gene model in the BC2F1 population with the association between resistant and susceptible progeny. A total of 333-BC2F1 plants were challenged with the most virulent pathotype P7.2 of Magnaporthe oryzae. Chi-square (χ2) analysis for phenotypic segregation in single-gene model showed goodness of fit (P = 0.4463) to the expected segregation ratio (1:1). In marker segregation analysis, two polymorphic markers (RM6836 and RM8225) clearly showed goodness of fit to the expected segregation testcross ratio (1:1) for the single-gene model. The marker RM8225 and RM6836 showed significant R2 values higher than 10 for the trait of the blast lesions degree (BLD). The positions of RM6836 and RM8225 markers on rice chromosome 6 and the distance between these two markers is 0.2 cM. We conclude that single dominant gene control the blast resistance in Pongsu Seribu 1 located on chromosome 6, which is linked to RM8225 and RM6836 microsatellite markers. This information could be useful in marker-assisted selection for blast resistance in rice breeding involving Pongsu Seribu 1.
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spelling Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breedingblast inheritancemicrosatellite markersBC2F1 populationrice varietyThe BC2F1 population was derived from a cross between rice variety, MR219 (susceptible to blast) and Pongsu Seribu 1 (resistant to blast). The objectives of this research were to know the inheritance pattern of blast resistance and to identify the linked markers associated with blast resistance in BC2F1 population. Sixteen microsatellite markers were found as polymorphic between the parents related to blast resistant genes (Pi-genes). Among the selected blast resistant linked markers, two markers RM6836 and RM8225 showed expected testcross ratio (1:1) for single-gene model in the BC2F1 population with the association between resistant and susceptible progeny. A total of 333-BC2F1 plants were challenged with the most virulent pathotype P7.2 of Magnaporthe oryzae. Chi-square (χ2) analysis for phenotypic segregation in single-gene model showed goodness of fit (P = 0.4463) to the expected segregation ratio (1:1). In marker segregation analysis, two polymorphic markers (RM6836 and RM8225) clearly showed goodness of fit to the expected segregation testcross ratio (1:1) for the single-gene model. The marker RM8225 and RM6836 showed significant R2 values higher than 10 for the trait of the blast lesions degree (BLD). The positions of RM6836 and RM8225 markers on rice chromosome 6 and the distance between these two markers is 0.2 cM. We conclude that single dominant gene control the blast resistance in Pongsu Seribu 1 located on chromosome 6, which is linked to RM8225 and RM6836 microsatellite markers. This information could be useful in marker-assisted selection for blast resistance in rice breeding involving Pongsu Seribu 1.Instituto Agronômico de Campinas2015-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052015000100033Bragantia v.74 n.1 2015reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.0311info:eu-repo/semantics/openAccessMiah,GousRafii,Mohd Y.Ismail,Mohd RaziPuteh,Adam BinRahim,Harun AbdulAshkani,SadeghLatif,Abduleng2015-07-28T00:00:00Zoai:scielo:S0006-87052015000100033Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2015-07-28T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false
dc.title.none.fl_str_mv Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
title Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
spellingShingle Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
Miah,Gous
blast inheritance
microsatellite markers
BC2F1 population
rice variety
title_short Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
title_full Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
title_fullStr Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
title_full_unstemmed Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
title_sort Inheritance patterns and identification of microsatellite markers linked to the rice blast resistance in BC2F1 population of rice breeding
author Miah,Gous
author_facet Miah,Gous
Rafii,Mohd Y.
Ismail,Mohd Razi
Puteh,Adam Bin
Rahim,Harun Abdul
Ashkani,Sadegh
Latif,Abdul
author_role author
author2 Rafii,Mohd Y.
Ismail,Mohd Razi
Puteh,Adam Bin
Rahim,Harun Abdul
Ashkani,Sadegh
Latif,Abdul
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Miah,Gous
Rafii,Mohd Y.
Ismail,Mohd Razi
Puteh,Adam Bin
Rahim,Harun Abdul
Ashkani,Sadegh
Latif,Abdul
dc.subject.por.fl_str_mv blast inheritance
microsatellite markers
BC2F1 population
rice variety
topic blast inheritance
microsatellite markers
BC2F1 population
rice variety
description The BC2F1 population was derived from a cross between rice variety, MR219 (susceptible to blast) and Pongsu Seribu 1 (resistant to blast). The objectives of this research were to know the inheritance pattern of blast resistance and to identify the linked markers associated with blast resistance in BC2F1 population. Sixteen microsatellite markers were found as polymorphic between the parents related to blast resistant genes (Pi-genes). Among the selected blast resistant linked markers, two markers RM6836 and RM8225 showed expected testcross ratio (1:1) for single-gene model in the BC2F1 population with the association between resistant and susceptible progeny. A total of 333-BC2F1 plants were challenged with the most virulent pathotype P7.2 of Magnaporthe oryzae. Chi-square (χ2) analysis for phenotypic segregation in single-gene model showed goodness of fit (P = 0.4463) to the expected segregation ratio (1:1). In marker segregation analysis, two polymorphic markers (RM6836 and RM8225) clearly showed goodness of fit to the expected segregation testcross ratio (1:1) for the single-gene model. The marker RM8225 and RM6836 showed significant R2 values higher than 10 for the trait of the blast lesions degree (BLD). The positions of RM6836 and RM8225 markers on rice chromosome 6 and the distance between these two markers is 0.2 cM. We conclude that single dominant gene control the blast resistance in Pongsu Seribu 1 located on chromosome 6, which is linked to RM8225 and RM6836 microsatellite markers. This information could be useful in marker-assisted selection for blast resistance in rice breeding involving Pongsu Seribu 1.
publishDate 2015
dc.date.none.fl_str_mv 2015-03-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052015000100033
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052015000100033
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4499.0311
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Agronômico de Campinas
publisher.none.fl_str_mv Instituto Agronômico de Campinas
dc.source.none.fl_str_mv Bragantia v.74 n.1 2015
reponame:Bragantia
instname:Instituto Agronômico de Campinas (IAC)
instacron:IAC
instname_str Instituto Agronômico de Campinas (IAC)
instacron_str IAC
institution IAC
reponame_str Bragantia
collection Bragantia
repository.name.fl_str_mv Bragantia - Instituto Agronômico de Campinas (IAC)
repository.mail.fl_str_mv bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br
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