Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)

Detalhes bibliográficos
Autor(a) principal: Cardona,Christian Camilo Castañeda
Data de Publicação: 2018
Outros Autores: Coronado,Yacenia Morillo, Conronado,Ana Cruz Morillo, Ochoa,Iván
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Bragantia
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000400546
Resumo: ABSTRACT The oil palm (Elaeis guineensis Jacq) plays an important role in the economy of some tropical countries; Colombia ranks first for production in Latin America and fifth in the world. The aim of this research was to characterize the genetic variability of 51 oil palm genotypes from the Congo with seven randomly amplified microsatellite markers RAM. As a result, 241 alleles were generated andthe number of polymorphic loci ranged from 46 to 14 for the ACA and CGA primers, respectively. High genetic diversity was found, with a total heterozygosity of 0.64, along with a high percentage of polymorphic loci, 89%. The coefficient of genetic differentiation (Fst) was 0.15, indicating that there was moderate genetic differentiation. The genetic diversity study differentiated the 51 genotypes into four groups with a similarity of 0.52. The RAM technique detected the genetic variability of the palm genotypes and showed a high degree of polymorphism and sensitivity for discrimination. These results provide information that can be used to develop conservation strategies for palm germplasm and breeding programs to obtain more productive palm genotypes with superior quality and tolerance to major diseases.
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spelling Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)breedinggenetic markersgermplasmgenetic structureABSTRACT The oil palm (Elaeis guineensis Jacq) plays an important role in the economy of some tropical countries; Colombia ranks first for production in Latin America and fifth in the world. The aim of this research was to characterize the genetic variability of 51 oil palm genotypes from the Congo with seven randomly amplified microsatellite markers RAM. As a result, 241 alleles were generated andthe number of polymorphic loci ranged from 46 to 14 for the ACA and CGA primers, respectively. High genetic diversity was found, with a total heterozygosity of 0.64, along with a high percentage of polymorphic loci, 89%. The coefficient of genetic differentiation (Fst) was 0.15, indicating that there was moderate genetic differentiation. The genetic diversity study differentiated the 51 genotypes into four groups with a similarity of 0.52. The RAM technique detected the genetic variability of the palm genotypes and showed a high degree of polymorphism and sensitivity for discrimination. These results provide information that can be used to develop conservation strategies for palm germplasm and breeding programs to obtain more productive palm genotypes with superior quality and tolerance to major diseases.Instituto Agronômico de Campinas2018-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000400546Bragantia v.77 n.4 2018reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.2017385info:eu-repo/semantics/openAccessCardona,Christian Camilo CastañedaCoronado,Yacenia MorilloConronado,Ana Cruz MorilloOchoa,Iváneng2018-11-13T00:00:00Zoai:scielo:S0006-87052018000400546Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2018-11-13T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false
dc.title.none.fl_str_mv Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
title Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
spellingShingle Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
Cardona,Christian Camilo Castañeda
breeding
genetic markers
germplasm
genetic structure
title_short Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
title_full Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
title_fullStr Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
title_full_unstemmed Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
title_sort Genetic diversity in oil palm (Elaeis guineensis Jacq) using RAM (Random Amplified Microsatellites)
author Cardona,Christian Camilo Castañeda
author_facet Cardona,Christian Camilo Castañeda
Coronado,Yacenia Morillo
Conronado,Ana Cruz Morillo
Ochoa,Iván
author_role author
author2 Coronado,Yacenia Morillo
Conronado,Ana Cruz Morillo
Ochoa,Iván
author2_role author
author
author
dc.contributor.author.fl_str_mv Cardona,Christian Camilo Castañeda
Coronado,Yacenia Morillo
Conronado,Ana Cruz Morillo
Ochoa,Iván
dc.subject.por.fl_str_mv breeding
genetic markers
germplasm
genetic structure
topic breeding
genetic markers
germplasm
genetic structure
description ABSTRACT The oil palm (Elaeis guineensis Jacq) plays an important role in the economy of some tropical countries; Colombia ranks first for production in Latin America and fifth in the world. The aim of this research was to characterize the genetic variability of 51 oil palm genotypes from the Congo with seven randomly amplified microsatellite markers RAM. As a result, 241 alleles were generated andthe number of polymorphic loci ranged from 46 to 14 for the ACA and CGA primers, respectively. High genetic diversity was found, with a total heterozygosity of 0.64, along with a high percentage of polymorphic loci, 89%. The coefficient of genetic differentiation (Fst) was 0.15, indicating that there was moderate genetic differentiation. The genetic diversity study differentiated the 51 genotypes into four groups with a similarity of 0.52. The RAM technique detected the genetic variability of the palm genotypes and showed a high degree of polymorphism and sensitivity for discrimination. These results provide information that can be used to develop conservation strategies for palm germplasm and breeding programs to obtain more productive palm genotypes with superior quality and tolerance to major diseases.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000400546
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052018000400546
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4499.2017385
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Agronômico de Campinas
publisher.none.fl_str_mv Instituto Agronômico de Campinas
dc.source.none.fl_str_mv Bragantia v.77 n.4 2018
reponame:Bragantia
instname:Instituto Agronômico de Campinas (IAC)
instacron:IAC
instname_str Instituto Agronômico de Campinas (IAC)
instacron_str IAC
institution IAC
reponame_str Bragantia
collection Bragantia
repository.name.fl_str_mv Bragantia - Instituto Agronômico de Campinas (IAC)
repository.mail.fl_str_mv bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br
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