Genetic variability in peppers accessions based on morphological, biochemical and molecular traits

Detalhes bibliográficos
Autor(a) principal: Constantino,Leonel Vinicius
Data de Publicação: 2020
Outros Autores: Fukuji,Anderson Yusei Suzuki, Zeffa,Douglas Mariani, Baba,Viviane Yumi, Erpen-Dalla Corte,Ligia, Giacomin,Renata Mussoi, Resende,Juliano Tadeu Vilela, Gonçalves,Leandro Simões Azeredo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Bragantia
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558
Resumo: ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits.
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spelling Genetic variability in peppers accessions based on morphological, biochemical and molecular traitsCapsicum baccatumgermplasm bankAFLPmolecular markersfruit qualityABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits.Instituto Agronômico de Campinas2020-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558Bragantia v.79 n.4 2020reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.20190525info:eu-repo/semantics/openAccessConstantino,Leonel ViniciusFukuji,Anderson Yusei SuzukiZeffa,Douglas MarianiBaba,Viviane YumiErpen-Dalla Corte,LigiaGiacomin,Renata MussoiResende,Juliano Tadeu VilelaGonçalves,Leandro Simões Azeredoeng2021-05-27T00:00:00Zoai:scielo:S0006-87052020000400558Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2021-05-27T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false
dc.title.none.fl_str_mv Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
title Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
spellingShingle Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
Constantino,Leonel Vinicius
Capsicum baccatum
germplasm bank
AFLP
molecular markers
fruit quality
title_short Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
title_full Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
title_fullStr Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
title_full_unstemmed Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
title_sort Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
author Constantino,Leonel Vinicius
author_facet Constantino,Leonel Vinicius
Fukuji,Anderson Yusei Suzuki
Zeffa,Douglas Mariani
Baba,Viviane Yumi
Erpen-Dalla Corte,Ligia
Giacomin,Renata Mussoi
Resende,Juliano Tadeu Vilela
Gonçalves,Leandro Simões Azeredo
author_role author
author2 Fukuji,Anderson Yusei Suzuki
Zeffa,Douglas Mariani
Baba,Viviane Yumi
Erpen-Dalla Corte,Ligia
Giacomin,Renata Mussoi
Resende,Juliano Tadeu Vilela
Gonçalves,Leandro Simões Azeredo
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Constantino,Leonel Vinicius
Fukuji,Anderson Yusei Suzuki
Zeffa,Douglas Mariani
Baba,Viviane Yumi
Erpen-Dalla Corte,Ligia
Giacomin,Renata Mussoi
Resende,Juliano Tadeu Vilela
Gonçalves,Leandro Simões Azeredo
dc.subject.por.fl_str_mv Capsicum baccatum
germplasm bank
AFLP
molecular markers
fruit quality
topic Capsicum baccatum
germplasm bank
AFLP
molecular markers
fruit quality
description ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1678-4499.20190525
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Agronômico de Campinas
publisher.none.fl_str_mv Instituto Agronômico de Campinas
dc.source.none.fl_str_mv Bragantia v.79 n.4 2020
reponame:Bragantia
instname:Instituto Agronômico de Campinas (IAC)
instacron:IAC
instname_str Instituto Agronômico de Campinas (IAC)
instacron_str IAC
institution IAC
reponame_str Bragantia
collection Bragantia
repository.name.fl_str_mv Bragantia - Instituto Agronômico de Campinas (IAC)
repository.mail.fl_str_mv bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br
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