Genetic variability in peppers accessions based on morphological, biochemical and molecular traits
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Bragantia |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558 |
Resumo: | ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits. |
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Genetic variability in peppers accessions based on morphological, biochemical and molecular traitsCapsicum baccatumgermplasm bankAFLPmolecular markersfruit qualityABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits.Instituto Agronômico de Campinas2020-12-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558Bragantia v.79 n.4 2020reponame:Bragantiainstname:Instituto Agronômico de Campinas (IAC)instacron:IAC10.1590/1678-4499.20190525info:eu-repo/semantics/openAccessConstantino,Leonel ViniciusFukuji,Anderson Yusei SuzukiZeffa,Douglas MarianiBaba,Viviane YumiErpen-Dalla Corte,LigiaGiacomin,Renata MussoiResende,Juliano Tadeu VilelaGonçalves,Leandro Simões Azeredoeng2021-05-27T00:00:00Zoai:scielo:S0006-87052020000400558Revistahttps://www.scielo.br/j/brag/https://old.scielo.br/oai/scielo-oai.phpbragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br1678-44990006-8705opendoar:2021-05-27T00:00Bragantia - Instituto Agronômico de Campinas (IAC)false |
dc.title.none.fl_str_mv |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
title |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
spellingShingle |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits Constantino,Leonel Vinicius Capsicum baccatum germplasm bank AFLP molecular markers fruit quality |
title_short |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
title_full |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
title_fullStr |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
title_full_unstemmed |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
title_sort |
Genetic variability in peppers accessions based on morphological, biochemical and molecular traits |
author |
Constantino,Leonel Vinicius |
author_facet |
Constantino,Leonel Vinicius Fukuji,Anderson Yusei Suzuki Zeffa,Douglas Mariani Baba,Viviane Yumi Erpen-Dalla Corte,Ligia Giacomin,Renata Mussoi Resende,Juliano Tadeu Vilela Gonçalves,Leandro Simões Azeredo |
author_role |
author |
author2 |
Fukuji,Anderson Yusei Suzuki Zeffa,Douglas Mariani Baba,Viviane Yumi Erpen-Dalla Corte,Ligia Giacomin,Renata Mussoi Resende,Juliano Tadeu Vilela Gonçalves,Leandro Simões Azeredo |
author2_role |
author author author author author author author |
dc.contributor.author.fl_str_mv |
Constantino,Leonel Vinicius Fukuji,Anderson Yusei Suzuki Zeffa,Douglas Mariani Baba,Viviane Yumi Erpen-Dalla Corte,Ligia Giacomin,Renata Mussoi Resende,Juliano Tadeu Vilela Gonçalves,Leandro Simões Azeredo |
dc.subject.por.fl_str_mv |
Capsicum baccatum germplasm bank AFLP molecular markers fruit quality |
topic |
Capsicum baccatum germplasm bank AFLP molecular markers fruit quality |
description |
ABSTRACT The evaluation of genetic diversity among the accessions of a germplasm collection results in information about promising materials suitable for breeding programs. Thus, the goal of this work was to characterize Capsicum baccatum accessions from different Brazilian regions, based on morphological, biochemical and molecular traits, aiming to support chili pepper breeding programs. The fruits were morphologically characterized based on fruit length, diameter, fresh mass and pericarp thickness, and biochemically analyzed for their content in ascorbic and phenolic acids, flavonoid and antioxidant activity by 2,2-diphenyl-1-picrylhydrazyl radical (DPPH•) and ferric reducing antioxidant power (FRAP) assays. All phenotypic traits showed significant differences among the chili pepper accessions, indicating a wide variability. The fruits were also characterized using amplified fragment length polymorphism (AFLP) molecular markers. The combination of six AFLP primers resulted in 1117 bands, 1033 of which were polymorphic. Divergence between accessions was estimated by the Ward’s hierarchical agglomerative clustering method, resulting in three and two clusters for fruit phenotypic traits and molecular data, respectively. In Bayesian analysis, molecular data also clustered the accessions in two groups. There was no association between the phenotypic descriptors and AFLP markers, indicating that both characterizations are important to better understand the genetic variability. Furthermore, it was not possible to group the accessions solely based on their origin for neither phenotypic descriptors and AFLP markers. The accessions G1, G5, G6, and G20 showed interesting characteristics and can be used in breeding programs, aiming the development of Capsicum spp. cultivars with desirable morphological and biochemical traits. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0006-87052020000400558 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1678-4499.20190525 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto Agronômico de Campinas |
publisher.none.fl_str_mv |
Instituto Agronômico de Campinas |
dc.source.none.fl_str_mv |
Bragantia v.79 n.4 2020 reponame:Bragantia instname:Instituto Agronômico de Campinas (IAC) instacron:IAC |
instname_str |
Instituto Agronômico de Campinas (IAC) |
instacron_str |
IAC |
institution |
IAC |
reponame_str |
Bragantia |
collection |
Bragantia |
repository.name.fl_str_mv |
Bragantia - Instituto Agronômico de Campinas (IAC) |
repository.mail.fl_str_mv |
bragantia@iac.sp.gov.br||bragantia@iac.sp.gov.br |
_version_ |
1754193307905294336 |