Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2021 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
| Texto Completo: | https://patua.iec.gov.br/handle/iec/4275 |
Resumo: | Molecular-typing can help in unraveling epidemiological scenarios and improvement for disease control strategies. A literature review of Mycobacterium tuberculosis transmission in Brazil through genotyping on 56 studies published from 1996-2019 was performed. The clustering rate for mycobacterial interspersed repetitive units - variable tandem repeats (MIRUVNTR) of 1,613 isolates were: 73%, 33% and 28% based on 12, 15 and 24-loci, respectively; while for RFLP-IS6110 were: 84% among prison population in Rio de Janeiro, 69% among multidrug-resistant isolates in Rio Grande do Sul, and 56.2% in general population in São Paulo. These findings could improve tuberculosis (TB) surveillance and set up a solid basis to build a database of Mycobacterium genomes |
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Conceição, Emilyn CostaSalvato, Richard SteinerGomes, Karen MachadoGuimarães, Arthur Emil dos SantosConceição, Marília Lima daGuimarães, Ricardo José de Paula Souza eSharma, AbhinavFurlaneto, Ismari PeriniBarcellos, Regina BonesBolleta, Valdes RobertoAnselmo, Lívia Maria PalaSisco, Maria CarolinaNiero, Cristina VianaFerrazoli, LucilaineRefrégier, GuislaineLourenço, Maria Cristina da SilvaGomes, Harrison MagdinierBrito, Artemir Coelho deCatanho, MarcosDuarte, Rafael SilvaSuffys, Philip NoelLima, Karla Valéria Batista2021-04-06T13:01:25Z2021-04-06T13:01:25Z2021CONCEIÇÃO, Emilyn Costa et al. Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review. Memórias do Instituto Oswaldo Cruz, v. 116, n. e200517, mar. 2021.1678-8060https://patua.iec.gov.br/handle/iec/427510.1590/0074-02760200517Molecular-typing can help in unraveling epidemiological scenarios and improvement for disease control strategies. A literature review of Mycobacterium tuberculosis transmission in Brazil through genotyping on 56 studies published from 1996-2019 was performed. The clustering rate for mycobacterial interspersed repetitive units - variable tandem repeats (MIRUVNTR) of 1,613 isolates were: 73%, 33% and 28% based on 12, 15 and 24-loci, respectively; while for RFLP-IS6110 were: 84% among prison population in Rio de Janeiro, 69% among multidrug-resistant isolates in Rio Grande do Sul, and 56.2% in general population in São Paulo. These findings could improve tuberculosis (TB) surveillance and set up a solid basis to build a database of Mycobacterium genomesFundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Programa de Pós-Graduação em Pesquisa Clínica e Doenças Infecciosas. Rio de Janeiro, RJ, Brasil / Fundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Laboratório de Bacteriologia e Bioensaios em Micobactérias. Rio de Janeiro, RJ, Brasil / Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Universidade Federal do Rio Grande do Sul. Programa de Pós-Graduação em Biologia Celular e Molecular. Porto Alegre, RS, Brasil / Secretaria Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância em Saúde. Centro de Desenvolvimento Científico e Tecnológico. Porto Alegre, RS, Brasil.Fundação Oswaldo Cruz. Escola Nacional de Saúde Pública Sergio Arouca. Centro de Referência Professor Hélio Fraga. Laboratório de Referência Nacional para Tuberculose e outras Micobacterioses. Rio de Janeiro, RJ, Brasil.Universidade do Estado do Pará. Instituto de Ciências Biológicas e da Saúde. Pós-Graduação Biologia Parasitária na Amazônia. Belém, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Universidade do Estado do Pará. Instituto de Ciências Biológicas e da Saúde. Pós-Graduação Biologia Parasitária na Amazônia. Belém, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Geoprocessamento. Ananindeua, PA, Brasil.International Institute of Information Technology. Department of Data Science. Bangalore, India.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Secretaria Estadual de Saúde do Rio Grande do Sul. Centro Estadual de Vigilância em Saúde. Centro de Desenvolvimento Científico e Tecnológico. Porto Alegre, RS, Brasil.Universidade de São Paulo. Faculdade de Medicina. Departamento de Clínica Médica. Ribeirão Preto, SP, Brasil.Universidade de São Paulo. Faculdade de Medicina. Departamento de Clínica Médica. Ribeirão Preto, SP, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil / Universidade Federal do Rio de Janeiro. Instituto de Microbiologia Paulo de Góes. Laboratório de Micobactérias. Rio de Janeiro, RJ, Brasil.Universidade Federal de São Paulo. Departamento de Microbiologia, Imunologia e Parasitologia. São Paulo, SP, Brasil.Instituto Adolfo Lutz. Centro de Bacteriologia. Núcleo de Tuberculose e Micobacterioses. São Paulo, SP, Brasil.Universit e Paris-Saclay. Ecologie Systematique Evolution. Centre National de la Recherche Scientifique. AgroParisTech, Orsay, France.Fundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Laboratório de Bacteriologia e Bioensaios em Micobactérias. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Coordenação Geral de Vigilância das Doenças de Transmissão Respiratória de Condições Crônicas. Brasília, DF, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genética Molecular de Microrganismos. Rio de Janeiro, RJ, Brasil.Universidade Federal do Rio de Janeiro. Instituto de Microbiologia Paulo de Góes. Laboratório de Micobactérias. Rio de Janeiro, RJ, Brasil.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Biologia Molecular Aplicada a Micobactérias. Rio de Janeiro, RJ, Brasil.Universidade do Estado do Pará. Instituto de Ciências Biológicas e da Saúde. Pós-Graduação Biologia Parasitária na Amazônia. Belém, PA, Brasil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. 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| dc.title.pt_BR.fl_str_mv |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| title |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| spellingShingle |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review Conceição, Emilyn Costa Tuberculose / patologia Mycobacterium tuberculosis / patogenicidade Literatura de Revisão como Assunto Técnicas de Genotipagem Tipagem MIRU-VNTR RFLP-IS6110 Prisões |
| title_short |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| title_full |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| title_fullStr |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| title_full_unstemmed |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| title_sort |
Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review |
| author |
Conceição, Emilyn Costa |
| author_facet |
Conceição, Emilyn Costa Salvato, Richard Steiner Gomes, Karen Machado Guimarães, Arthur Emil dos Santos Conceição, Marília Lima da Guimarães, Ricardo José de Paula Souza e Sharma, Abhinav Furlaneto, Ismari Perini Barcellos, Regina Bones Bolleta, Valdes Roberto Anselmo, Lívia Maria Pala Sisco, Maria Carolina Niero, Cristina Viana Ferrazoli, Lucilaine Refrégier, Guislaine Lourenço, Maria Cristina da Silva Gomes, Harrison Magdinier Brito, Artemir Coelho de Catanho, Marcos Duarte, Rafael Silva Suffys, Philip Noel Lima, Karla Valéria Batista |
| author_role |
author |
| author2 |
Salvato, Richard Steiner Gomes, Karen Machado Guimarães, Arthur Emil dos Santos Conceição, Marília Lima da Guimarães, Ricardo José de Paula Souza e Sharma, Abhinav Furlaneto, Ismari Perini Barcellos, Regina Bones Bolleta, Valdes Roberto Anselmo, Lívia Maria Pala Sisco, Maria Carolina Niero, Cristina Viana Ferrazoli, Lucilaine Refrégier, Guislaine Lourenço, Maria Cristina da Silva Gomes, Harrison Magdinier Brito, Artemir Coelho de Catanho, Marcos Duarte, Rafael Silva Suffys, Philip Noel Lima, Karla Valéria Batista |
| author2_role |
author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Conceição, Emilyn Costa Salvato, Richard Steiner Gomes, Karen Machado Guimarães, Arthur Emil dos Santos Conceição, Marília Lima da Guimarães, Ricardo José de Paula Souza e Sharma, Abhinav Furlaneto, Ismari Perini Barcellos, Regina Bones Bolleta, Valdes Roberto Anselmo, Lívia Maria Pala Sisco, Maria Carolina Niero, Cristina Viana Ferrazoli, Lucilaine Refrégier, Guislaine Lourenço, Maria Cristina da Silva Gomes, Harrison Magdinier Brito, Artemir Coelho de Catanho, Marcos Duarte, Rafael Silva Suffys, Philip Noel Lima, Karla Valéria Batista |
| dc.subject.decsPrimary.pt_BR.fl_str_mv |
Tuberculose / patologia Mycobacterium tuberculosis / patogenicidade Literatura de Revisão como Assunto Técnicas de Genotipagem Tipagem MIRU-VNTR RFLP-IS6110 Prisões |
| topic |
Tuberculose / patologia Mycobacterium tuberculosis / patogenicidade Literatura de Revisão como Assunto Técnicas de Genotipagem Tipagem MIRU-VNTR RFLP-IS6110 Prisões |
| description |
Molecular-typing can help in unraveling epidemiological scenarios and improvement for disease control strategies. A literature review of Mycobacterium tuberculosis transmission in Brazil through genotyping on 56 studies published from 1996-2019 was performed. The clustering rate for mycobacterial interspersed repetitive units - variable tandem repeats (MIRUVNTR) of 1,613 isolates were: 73%, 33% and 28% based on 12, 15 and 24-loci, respectively; while for RFLP-IS6110 were: 84% among prison population in Rio de Janeiro, 69% among multidrug-resistant isolates in Rio Grande do Sul, and 56.2% in general population in São Paulo. These findings could improve tuberculosis (TB) surveillance and set up a solid basis to build a database of Mycobacterium genomes |
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2021 |
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2021-04-06T13:01:25Z |
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2021-04-06T13:01:25Z |
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2021 |
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info:eu-repo/semantics/article |
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article |
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CONCEIÇÃO, Emilyn Costa et al. Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review. Memórias do Instituto Oswaldo Cruz, v. 116, n. e200517, mar. 2021. |
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https://patua.iec.gov.br/handle/iec/4275 |
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1678-8060 |
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10.1590/0074-02760200517 |
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CONCEIÇÃO, Emilyn Costa et al. Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review. Memórias do Instituto Oswaldo Cruz, v. 116, n. e200517, mar. 2021. 1678-8060 10.1590/0074-02760200517 |
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Instituto Oswaldo Cruz |
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