Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.

Detalhes bibliográficos
Autor(a) principal: Reymão, Tammy Kathlyn Amaral
Data de Publicação: 2018
Outros Autores: Fumian, Tulio Machado, Justino, Maria Cleonice Aguiar, Hernandez, Juliana Merces, Bandeira, Renato Silva, Lucena, Maria Silvia Sousa, Teixeira, Dielle Monteiro, Farias, Fredison Pinheiro, Silva, Luciana Damascena, Linhares, Alexandre da Costa, Gabbay, Yvone Benchimol
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
Texto Completo: https://patua.iec.gov.br/handle/iec/3317
Resumo: Worldwide, norovirus (NoV) is a major cause of acute gastroenteritis (AGE) responsible for pandemics every ~3 years, and over 200,000 deaths per year, with the majority in children from developing countries. We investigate the incidence of NoV in children hospitalized with AGE from Belém, Pará, Brazil, and also correlated viral RNA levels in their blood and stool with clinical severity. For this purpose, paired stool and serum samples were collected from 445 pediatric patients, ≤9 years between March 2012 and June 2015. Enzyme-linked immunosorbent assay (EIA) was used to detect NoV in stool and reverse transcription quantitative PCR (RT-qPCR) used to quantify NoV RNA levels in sera (RNAemia) and in the positive stool. Positives samples were characterized by the partial ORF1/2 region sequence of viral genome. NoV antigen was detected in 24.3% (108/445) of stool samples, with RNAemia also present in 20.4% (22/108). RNAemia and a high stool viral load (>107 genome copies/gram of faeces) were associated with longer hospitalizations. The prevalent genotypes were GII.4 Sydney_2012 (71.6%-58/81) and New Orleans_2009 (6.2%-5/81) variants. Eight other genotypes belonging to GII were detected and four of them were recombinant strains. All sera were characterized as GII.4 and shared 100% similarity with their stool. The results suggest that the dissemination of NoV to the blood stream is not uncommon and may be related to increased faecal viral loads and disease severity.
id IEC-2_376735ec0c92f5799958098fa09283ff
oai_identifier_str oai:patua.iec.gov.br:iec/3317
network_acronym_str IEC-2
network_name_str Repositório Digital do Instituto Evandro Chagas (Patuá)
repository_id_str
spelling Reymão, Tammy Kathlyn AmaralFumian, Tulio MachadoJustino, Maria Cleonice AguiarHernandez, Juliana MercesBandeira, Renato SilvaLucena, Maria Silvia SousaTeixeira, Dielle MonteiroFarias, Fredison PinheiroSilva, Luciana DamascenaLinhares, Alexandre da CostaGabbay, Yvone Benchimol2018-09-05T14:29:07Z2018-09-05T14:29:07Z2018REYMÃO, Tammy Kathlyn Amaral et al. Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis. PLoS One, v. 13, n. 7, e0199763, Jul 2018.1932-6203https://patua.iec.gov.br/handle/iec/331710.1371/journal.pone.0199763Worldwide, norovirus (NoV) is a major cause of acute gastroenteritis (AGE) responsible for pandemics every ~3 years, and over 200,000 deaths per year, with the majority in children from developing countries. We investigate the incidence of NoV in children hospitalized with AGE from Belém, Pará, Brazil, and also correlated viral RNA levels in their blood and stool with clinical severity. For this purpose, paired stool and serum samples were collected from 445 pediatric patients, ≤9 years between March 2012 and June 2015. Enzyme-linked immunosorbent assay (EIA) was used to detect NoV in stool and reverse transcription quantitative PCR (RT-qPCR) used to quantify NoV RNA levels in sera (RNAemia) and in the positive stool. Positives samples were characterized by the partial ORF1/2 region sequence of viral genome. NoV antigen was detected in 24.3% (108/445) of stool samples, with RNAemia also present in 20.4% (22/108). RNAemia and a high stool viral load (>107 genome copies/gram of faeces) were associated with longer hospitalizations. The prevalent genotypes were GII.4 Sydney_2012 (71.6%-58/81) and New Orleans_2009 (6.2%-5/81) variants. Eight other genotypes belonging to GII were detected and four of them were recombinant strains. All sera were characterized as GII.4 and shared 100% similarity with their stool. The results suggest that the dissemination of NoV to the blood stream is not uncommon and may be related to increased faecal viral loads and disease severity.This study was supported by Evandro Chagas Institute, Brazilian Ministry of Health. The main project for rotavirus research, coordinated by Dr. MCAJ, was contemplated in 2014 with a funding of R$ 35,000.00, through the universal call of the National Council for Scientific and Technological Development Nº14 / 2013.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Programa de Pós-Graduação em Virologia. Ananindeua, PA, Brasil.Oswaldo Cruz Foundation. Laboratory of Comparative and Environmental Virology. Rio de Janeiro, RJ, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Federal University of Pará. Institute of Biological Sciences. Postgraduate Program in Biology of Infectious and Parasitic Agents. Belém, PA, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.engPublic Library of ScienceNorovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleNorovirus / patogenicidadeInfecções por Caliciviridae / virologiaGastroenterite / virologiaVariação Genética / genéticaMonitoramento EpidemiológicoReação em Cadeia da Polimerase / métodosEnsaio de Imunoadsorção Enzimática / utilizaçãoFezes / virologiainfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALNorovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdfNorovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdfapplication/pdf1861226https://patua.iec.gov.br/bitstreams/e7f77792-27df-4861-b31a-1136a855cdd5/downloade03edc36e190e9befe48af498bed17bfMD51LICENSElicense.txtlicense.txttext/plain; charset=utf-871https://patua.iec.gov.br/bitstreams/03981aa0-6d3a-404d-a5dc-1ddd7c03a3df/download52f1732ea66fbd1123abe39f5373b797MD52TEXTNorovirus RNA in serum associated with increased fecal viral load in children: Detection, quantification and molecular analysis.pdf.txtNorovirus RNA in serum associated with increased fecal viral load in children: Detection, quantification and molecular analysis.pdf.txtExtracted texttext/plain46078https://patua.iec.gov.br/bitstreams/f2412a0d-5b9f-4fdb-a838-9d25bbed9c79/download0bbd378fe993ead5c4abef78cdad4352MD53Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdf.txtNorovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdf.txtExtracted texttext/plain52207https://patua.iec.gov.br/bitstreams/cd977db7-19b4-46e0-b9f8-81ad1a3838f0/downloade2c331e9212185c6dedb07b10aefa430MD57THUMBNAILNorovirus RNA in serum associated with increased fecal viral load in children: Detection, quantification and molecular analysis.pdf.jpgNorovirus RNA in serum associated with increased fecal viral load in children: Detection, quantification and molecular analysis.pdf.jpgGenerated Thumbnailimage/jpeg1791https://patua.iec.gov.br/bitstreams/34dd3827-be4a-4898-a244-c39ed0011e1d/download5cd462ef4a6104cea2c740bfcdcb22c7MD54Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdf.jpgNorovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.pdf.jpgGenerated Thumbnailimage/jpeg5853https://patua.iec.gov.br/bitstreams/adfab061-a028-4473-a1c9-fea00f360657/download30529a45ed61bf5fd0be77fca4cb7249MD58iec/33172022-10-21 00:44:45.315oai:patua.iec.gov.br:iec/3317https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-21T00:44:45Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)falseVG9kb3Mgb3MgZG9jdW1lbnRvcyBkZXNzYSBjb2xlw6fDo28gc2VndWVtIGEgTGljZW7Dp2EgQ3JlYXRpdmUgY29tbW9ucy4=
dc.title.pt_BR.fl_str_mv Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
title Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
spellingShingle Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
Reymão, Tammy Kathlyn Amaral
Norovirus / patogenicidade
Infecções por Caliciviridae / virologia
Gastroenterite / virologia
Variação Genética / genética
Monitoramento Epidemiológico
Reação em Cadeia da Polimerase / métodos
Ensaio de Imunoadsorção Enzimática / utilização
Fezes / virologia
title_short Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
title_full Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
title_fullStr Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
title_full_unstemmed Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
title_sort Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis.
author Reymão, Tammy Kathlyn Amaral
author_facet Reymão, Tammy Kathlyn Amaral
Fumian, Tulio Machado
Justino, Maria Cleonice Aguiar
Hernandez, Juliana Merces
Bandeira, Renato Silva
Lucena, Maria Silvia Sousa
Teixeira, Dielle Monteiro
Farias, Fredison Pinheiro
Silva, Luciana Damascena
Linhares, Alexandre da Costa
Gabbay, Yvone Benchimol
author_role author
author2 Fumian, Tulio Machado
Justino, Maria Cleonice Aguiar
Hernandez, Juliana Merces
Bandeira, Renato Silva
Lucena, Maria Silvia Sousa
Teixeira, Dielle Monteiro
Farias, Fredison Pinheiro
Silva, Luciana Damascena
Linhares, Alexandre da Costa
Gabbay, Yvone Benchimol
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Reymão, Tammy Kathlyn Amaral
Fumian, Tulio Machado
Justino, Maria Cleonice Aguiar
Hernandez, Juliana Merces
Bandeira, Renato Silva
Lucena, Maria Silvia Sousa
Teixeira, Dielle Monteiro
Farias, Fredison Pinheiro
Silva, Luciana Damascena
Linhares, Alexandre da Costa
Gabbay, Yvone Benchimol
dc.subject.decsPrimary.pt_BR.fl_str_mv Norovirus / patogenicidade
Infecções por Caliciviridae / virologia
Gastroenterite / virologia
Variação Genética / genética
Monitoramento Epidemiológico
Reação em Cadeia da Polimerase / métodos
Ensaio de Imunoadsorção Enzimática / utilização
Fezes / virologia
topic Norovirus / patogenicidade
Infecções por Caliciviridae / virologia
Gastroenterite / virologia
Variação Genética / genética
Monitoramento Epidemiológico
Reação em Cadeia da Polimerase / métodos
Ensaio de Imunoadsorção Enzimática / utilização
Fezes / virologia
description Worldwide, norovirus (NoV) is a major cause of acute gastroenteritis (AGE) responsible for pandemics every ~3 years, and over 200,000 deaths per year, with the majority in children from developing countries. We investigate the incidence of NoV in children hospitalized with AGE from Belém, Pará, Brazil, and also correlated viral RNA levels in their blood and stool with clinical severity. For this purpose, paired stool and serum samples were collected from 445 pediatric patients, ≤9 years between March 2012 and June 2015. Enzyme-linked immunosorbent assay (EIA) was used to detect NoV in stool and reverse transcription quantitative PCR (RT-qPCR) used to quantify NoV RNA levels in sera (RNAemia) and in the positive stool. Positives samples were characterized by the partial ORF1/2 region sequence of viral genome. NoV antigen was detected in 24.3% (108/445) of stool samples, with RNAemia also present in 20.4% (22/108). RNAemia and a high stool viral load (>107 genome copies/gram of faeces) were associated with longer hospitalizations. The prevalent genotypes were GII.4 Sydney_2012 (71.6%-58/81) and New Orleans_2009 (6.2%-5/81) variants. Eight other genotypes belonging to GII were detected and four of them were recombinant strains. All sera were characterized as GII.4 and shared 100% similarity with their stool. The results suggest that the dissemination of NoV to the blood stream is not uncommon and may be related to increased faecal viral loads and disease severity.
publishDate 2018
dc.date.accessioned.fl_str_mv 2018-09-05T14:29:07Z
dc.date.available.fl_str_mv 2018-09-05T14:29:07Z
dc.date.issued.fl_str_mv 2018
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv REYMÃO, Tammy Kathlyn Amaral et al. Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis. PLoS One, v. 13, n. 7, e0199763, Jul 2018.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/3317
dc.identifier.issn.-.fl_str_mv 1932-6203
dc.identifier.doi.-.fl_str_mv 10.1371/journal.pone.0199763
identifier_str_mv REYMÃO, Tammy Kathlyn Amaral et al. Norovirus RNA in serum associated with increased fecal viral load in children: detection, quantification and molecular analysis. PLoS One, v. 13, n. 7, e0199763, Jul 2018.
1932-6203
10.1371/journal.pone.0199763
url https://patua.iec.gov.br/handle/iec/3317
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Public Library of Science
publisher.none.fl_str_mv Public Library of Science
dc.source.none.fl_str_mv reponame:Repositório Digital do Instituto Evandro Chagas (Patuá)
instname:Instituto Evandro Chagas (IEC)
instacron:IEC
instname_str Instituto Evandro Chagas (IEC)
instacron_str IEC
institution IEC
reponame_str Repositório Digital do Instituto Evandro Chagas (Patuá)
collection Repositório Digital do Instituto Evandro Chagas (Patuá)
bitstream.url.fl_str_mv https://patua.iec.gov.br/bitstreams/e7f77792-27df-4861-b31a-1136a855cdd5/download
https://patua.iec.gov.br/bitstreams/03981aa0-6d3a-404d-a5dc-1ddd7c03a3df/download
https://patua.iec.gov.br/bitstreams/f2412a0d-5b9f-4fdb-a838-9d25bbed9c79/download
https://patua.iec.gov.br/bitstreams/cd977db7-19b4-46e0-b9f8-81ad1a3838f0/download
https://patua.iec.gov.br/bitstreams/34dd3827-be4a-4898-a244-c39ed0011e1d/download
https://patua.iec.gov.br/bitstreams/adfab061-a028-4473-a1c9-fea00f360657/download
bitstream.checksum.fl_str_mv e03edc36e190e9befe48af498bed17bf
52f1732ea66fbd1123abe39f5373b797
0bbd378fe993ead5c4abef78cdad4352
e2c331e9212185c6dedb07b10aefa430
5cd462ef4a6104cea2c740bfcdcb22c7
30529a45ed61bf5fd0be77fca4cb7249
bitstream.checksumAlgorithm.fl_str_mv MD5
MD5
MD5
MD5
MD5
MD5
repository.name.fl_str_mv Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)
repository.mail.fl_str_mv clariceneta@iec.gov.br || Biblioteca@iec.gov.br
_version_ 1809190059398660096