Comparative chromosome painting in hummingbirds (Trochilidae)

Detalhes bibliográficos
Autor(a) principal: Degrandi, Tiago Marafiga
Data de Publicação: 2020
Outros Autores: Furo, Ivanete de Oliveira, Oliveira, Edivaldo Herculano Corrêa de, Costa, Alice Lemos, Ferguson-Smith, Malcolm A, O'Brien, Patricia C. M, Pereira, Jorge C, Garnero, Analía Del Valle, Gunski, Ricardo José, Artoni, Roberto Ferreira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Digital do Instituto Evandro Chagas (Patuá)
DOI: 10.1590/1678-4685-gmb-2020-0162
Texto Completo: https://patua.iec.gov.br/handle/iec/4219
Resumo: Hummingbirds (Trochilidae) are one of the most enigmatic avian groups, and also among the most diverse, with approximately 360 recognized species in 106 genera, of which 43 are monotypic. This fact has generated considerable interest in the evolutionary biology of the hummingbirds, which is reflected in a number of DNA-based studies. However, only a few of them explored chromosomal data. Given this, the present study provides an analysis of the karyotypes of three species of Neotropical hummingbirds, Anthracothorax nigricollis (ANI), Campylopterus largipennis (CLA), and Hylocharis chrysura (HCH), in order to analyze the chromosomal processes associated with the evolution of the Trochilidae. The diploid number of ANI is 2n=80 chromosomes, while CLA and HCH have identical karyotypes, with 2n=78. Chromosome painting with Gallus gallus probes (GGA1–12) shows that the hummingbirds have a karyotype close to the proposed ancestral bird karyotype. Despite this, an informative rearrangement was detected: an in-tandem fusion between GGA7 and GGA9 found in CLA and HCH, but absent in ANI. A comparative analysis with the tree of life of the hummingbirds indicated that this fusion must have arisen following the divergence of a number of hummingbird species.
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spelling Degrandi, Tiago MarafigaFuro, Ivanete de OliveiraOliveira, Edivaldo Herculano Corrêa deCosta, Alice LemosFerguson-Smith, Malcolm AO'Brien, Patricia C. MPereira, Jorge CGarnero, Analía Del ValleGunski, Ricardo JoséArtoni, Roberto Ferreira2021-01-25T16:52:05Z2021-01-25T16:52:05Z2020DEGRANDI, Tiago Marafiga et al. Comparative chromosome painting in hummingbirds (Trochilidae). Genetics and Molecular Biology, v. 43, n. 4, e20200162, Nov. 2020.1415-4757https://patua.iec.gov.br/handle/iec/421910.1590/1678-4685-gmb-2020-0162Hummingbirds (Trochilidae) are one of the most enigmatic avian groups, and also among the most diverse, with approximately 360 recognized species in 106 genera, of which 43 are monotypic. This fact has generated considerable interest in the evolutionary biology of the hummingbirds, which is reflected in a number of DNA-based studies. However, only a few of them explored chromosomal data. Given this, the present study provides an analysis of the karyotypes of three species of Neotropical hummingbirds, Anthracothorax nigricollis (ANI), Campylopterus largipennis (CLA), and Hylocharis chrysura (HCH), in order to analyze the chromosomal processes associated with the evolution of the Trochilidae. The diploid number of ANI is 2n=80 chromosomes, while CLA and HCH have identical karyotypes, with 2n=78. Chromosome painting with Gallus gallus probes (GGA1–12) shows that the hummingbirds have a karyotype close to the proposed ancestral bird karyotype. Despite this, an informative rearrangement was detected: an in-tandem fusion between GGA7 and GGA9 found in CLA and HCH, but absent in ANI. A comparative analysis with the tree of life of the hummingbirds indicated that this fusion must have arisen following the divergence of a number of hummingbird species.Conselho Nacional de Desenvolvimento Científico e TecnológicoUniversidade Estadual de Ponta Grossa. Programa de Pós-Graduação em Biologia Evolutiva. Ponta Grossa, PR, Brazil.Universidade Federal Rural da Amazônia. Laboratório de Reprodução Animal. Parauapebas, PA, Brazil / University of Cambridge. Department of Veterinary Medicine. Cambridge Resource Centre for Comparative Genomics. Cambridge, UK.Universidade Federal do Pará. Programa de Pós-Graduação em Genética e Biologia Molecular. Belém, PA, Brazil / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil.Universidade Federal do Pampa. Programa de Pós-Graduação em Ciências Biológicas. São Gabriel, RS, Brazil.University of Cambridge. Department of Veterinary Medicine. Cambridge Resource Centre for Comparative Genomics. Cambridge, UK.University of Cambridge. Department of Veterinary Medicine. Cambridge Resource Centre for Comparative Genomics. Cambridge, UK.University of Trás‐os‐Montes and Alto Douro. Animal and Veterinary Research Centre. Vila Real, Portugal.Universidade Federal do Pampa. Programa de Pós-Graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Federal do Pampa. Programa de Pós-Graduação em Ciências Biológicas. São Gabriel, RS, Brazil.Universidade Estadual de Ponta Grossa. Programa de Pós-Graduação em Biologia Evolutiva. Ponta Grossa, PR, Brazil.engSociedade Brasileira de GenéticaComparative chromosome painting in hummingbirds (Trochilidae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAves / anatomia & histologiaColoração Cromossômica / veterináriaCariótipoinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALComparative chromosome painting in hummingbirds (Trochilidae).pdfComparative chromosome painting in hummingbirds (Trochilidae).pdfapplication/pdf3544766https://patua.iec.gov.br/bitstreams/5921ca37-549e-4c98-8700-9765a260fe53/downloadeef4d3646a117836f3200415770671cbMD51TEXTComparative chromosome painting in hummingbirds (Trochilidae).pdf.txtComparative chromosome painting in hummingbirds (Trochilidae).pdf.txtExtracted texttext/plain23292https://patua.iec.gov.br/bitstreams/27d4b2b6-1420-4225-b5bb-78116e9844c8/download46dfcb8edb92b071d1d8dcb0f0b6ec54MD55THUMBNAILComparative chromosome painting in hummingbirds (Trochilidae).pdf.jpgComparative chromosome painting in hummingbirds (Trochilidae).pdf.jpgGenerated Thumbnailimage/jpeg5763https://patua.iec.gov.br/bitstreams/14df4f28-578c-4f9b-8eba-7b386a16e4be/downloada72793b00a72cb67f68fb8cd9291c2c1MD56LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/2fd002d5-db7f-48fc-9339-8a182b2db520/download11832eea31b16df8613079d742d61793MD52iec/42192022-10-20 23:57:49.011oai:patua.iec.gov.br:iec/4219https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T23:57:49Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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
dc.title.pt_BR.fl_str_mv Comparative chromosome painting in hummingbirds (Trochilidae)
title Comparative chromosome painting in hummingbirds (Trochilidae)
spellingShingle Comparative chromosome painting in hummingbirds (Trochilidae)
Comparative chromosome painting in hummingbirds (Trochilidae)
Degrandi, Tiago Marafiga
Aves / anatomia & histologia
Coloração Cromossômica / veterinária
Cariótipo
Degrandi, Tiago Marafiga
Aves / anatomia & histologia
Coloração Cromossômica / veterinária
Cariótipo
title_short Comparative chromosome painting in hummingbirds (Trochilidae)
title_full Comparative chromosome painting in hummingbirds (Trochilidae)
title_fullStr Comparative chromosome painting in hummingbirds (Trochilidae)
Comparative chromosome painting in hummingbirds (Trochilidae)
title_full_unstemmed Comparative chromosome painting in hummingbirds (Trochilidae)
Comparative chromosome painting in hummingbirds (Trochilidae)
title_sort Comparative chromosome painting in hummingbirds (Trochilidae)
author Degrandi, Tiago Marafiga
author_facet Degrandi, Tiago Marafiga
Degrandi, Tiago Marafiga
Furo, Ivanete de Oliveira
Oliveira, Edivaldo Herculano Corrêa de
Costa, Alice Lemos
Ferguson-Smith, Malcolm A
O'Brien, Patricia C. M
Pereira, Jorge C
Garnero, Analía Del Valle
Gunski, Ricardo José
Artoni, Roberto Ferreira
Furo, Ivanete de Oliveira
Oliveira, Edivaldo Herculano Corrêa de
Costa, Alice Lemos
Ferguson-Smith, Malcolm A
O'Brien, Patricia C. M
Pereira, Jorge C
Garnero, Analía Del Valle
Gunski, Ricardo José
Artoni, Roberto Ferreira
author_role author
author2 Furo, Ivanete de Oliveira
Oliveira, Edivaldo Herculano Corrêa de
Costa, Alice Lemos
Ferguson-Smith, Malcolm A
O'Brien, Patricia C. M
Pereira, Jorge C
Garnero, Analía Del Valle
Gunski, Ricardo José
Artoni, Roberto Ferreira
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Degrandi, Tiago Marafiga
Furo, Ivanete de Oliveira
Oliveira, Edivaldo Herculano Corrêa de
Costa, Alice Lemos
Ferguson-Smith, Malcolm A
O'Brien, Patricia C. M
Pereira, Jorge C
Garnero, Analía Del Valle
Gunski, Ricardo José
Artoni, Roberto Ferreira
dc.subject.decsPrimary.none.fl_str_mv Aves / anatomia & histologia
Coloração Cromossômica / veterinária
Cariótipo
topic Aves / anatomia & histologia
Coloração Cromossômica / veterinária
Cariótipo
description Hummingbirds (Trochilidae) are one of the most enigmatic avian groups, and also among the most diverse, with approximately 360 recognized species in 106 genera, of which 43 are monotypic. This fact has generated considerable interest in the evolutionary biology of the hummingbirds, which is reflected in a number of DNA-based studies. However, only a few of them explored chromosomal data. Given this, the present study provides an analysis of the karyotypes of three species of Neotropical hummingbirds, Anthracothorax nigricollis (ANI), Campylopterus largipennis (CLA), and Hylocharis chrysura (HCH), in order to analyze the chromosomal processes associated with the evolution of the Trochilidae. The diploid number of ANI is 2n=80 chromosomes, while CLA and HCH have identical karyotypes, with 2n=78. Chromosome painting with Gallus gallus probes (GGA1–12) shows that the hummingbirds have a karyotype close to the proposed ancestral bird karyotype. Despite this, an informative rearrangement was detected: an in-tandem fusion between GGA7 and GGA9 found in CLA and HCH, but absent in ANI. A comparative analysis with the tree of life of the hummingbirds indicated that this fusion must have arisen following the divergence of a number of hummingbird species.
publishDate 2020
dc.date.issued.fl_str_mv 2020
dc.date.accessioned.fl_str_mv 2021-01-25T16:52:05Z
dc.date.available.fl_str_mv 2021-01-25T16:52:05Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.citation.fl_str_mv DEGRANDI, Tiago Marafiga et al. Comparative chromosome painting in hummingbirds (Trochilidae). Genetics and Molecular Biology, v. 43, n. 4, e20200162, Nov. 2020.
dc.identifier.uri.fl_str_mv https://patua.iec.gov.br/handle/iec/4219
dc.identifier.issn.-.fl_str_mv 1415-4757
dc.identifier.doi.-.fl_str_mv 10.1590/1678-4685-gmb-2020-0162
identifier_str_mv DEGRANDI, Tiago Marafiga et al. Comparative chromosome painting in hummingbirds (Trochilidae). Genetics and Molecular Biology, v. 43, n. 4, e20200162, Nov. 2020.
1415-4757
10.1590/1678-4685-gmb-2020-0162
url https://patua.iec.gov.br/handle/iec/4219
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dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
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