Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial
Autor(a) principal: | |
---|---|
Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3632 |
Resumo: | The mainstay of malaria diagnosis relies on rapid diagnostic tests (RDTs) and microscopy, both of which lack analytical sensitivity. This leads to repeat testing to rule out malaria. A prospective diagnostic trial of the Meridian illumigene Malaria assay (loop-mediated isothermal amplification [LAMP]) was conducted comparing it with reference microscopy and RDTs (BinaxNOW Malaria) in returning travelers between June 2017 and January 2018. Returning travelers with signs and symptoms of malaria were enrolled in the study. RDTs, microscopy, and LAMP assays were performed simultaneously. A total of 298 patients (50.7% male; mean age, 32.5 years) were enrolled, most visiting friends and relatives (43.3%), presenting with fever (88.9%), not taking prophylaxis (82.9%), and treated as outpatients (84.1%). In the prospective arm (n = 348), LAMP had a sensitivity of 98.1% (95% confidence interval [CI], 90.0%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy. After discrepant resolution with real-time polymerase chain reaction, LAMP had a sensitivity of 100% (95% CI, 93.7%-100%) and a specificity of 100% (95% CI, 98.7%-100%) vs microscopy. After discrepant resolution, RDTs had a sensitivity of 83.3% (95% CI, 58.6%-96.4%) and a specificity of 96.2% (95% CI, 93.2%-98.1%) vs microscopy. When including retrospective specimens (n = 377), LAMP had a sensitivity of 98.8% (95% CI, 93.2%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy, and after discrepant resolution of this set, LAMP had a sensitivity of 100% (95% CI, 95.8%-100%) and a specificity of 100% (95% CI, 98.7%-100%). A cost-benefit analysis of reagents and labor suggests savings of up to USD$13 per specimen using a novel algorithm with LAMP screening. |
id |
IEC-2_a23e393e40ffe11f56db1b4941bf457a |
---|---|
oai_identifier_str |
oai:patua.iec.gov.br:iec/3632 |
network_acronym_str |
IEC-2 |
network_name_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
repository_id_str |
|
spelling |
Cheaveau, JamesNguyen, HongChow, BarbaraMarasinghe, DewduneeMohon, Abu NaserYuan, HongViana, Giselle Maria RachidVan Schalkwyk, DonellyChurch, DeirdreChan, WilsonPillai, Dylan R2019-04-04T11:24:16Z2019-04-04T11:24:16Z2018CHEAVEAU, James et al. Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial. Open Forum Infectious Diseases, v. 5, n. 11, p. 1-9, Oct. 2018.2328-8957https://patua.iec.gov.br/handle/iec/363210.1093/ofid/ofy260The mainstay of malaria diagnosis relies on rapid diagnostic tests (RDTs) and microscopy, both of which lack analytical sensitivity. This leads to repeat testing to rule out malaria. A prospective diagnostic trial of the Meridian illumigene Malaria assay (loop-mediated isothermal amplification [LAMP]) was conducted comparing it with reference microscopy and RDTs (BinaxNOW Malaria) in returning travelers between June 2017 and January 2018. Returning travelers with signs and symptoms of malaria were enrolled in the study. RDTs, microscopy, and LAMP assays were performed simultaneously. A total of 298 patients (50.7% male; mean age, 32.5 years) were enrolled, most visiting friends and relatives (43.3%), presenting with fever (88.9%), not taking prophylaxis (82.9%), and treated as outpatients (84.1%). In the prospective arm (n = 348), LAMP had a sensitivity of 98.1% (95% confidence interval [CI], 90.0%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy. After discrepant resolution with real-time polymerase chain reaction, LAMP had a sensitivity of 100% (95% CI, 93.7%-100%) and a specificity of 100% (95% CI, 98.7%-100%) vs microscopy. After discrepant resolution, RDTs had a sensitivity of 83.3% (95% CI, 58.6%-96.4%) and a specificity of 96.2% (95% CI, 93.2%-98.1%) vs microscopy. When including retrospective specimens (n = 377), LAMP had a sensitivity of 98.8% (95% CI, 93.2%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy, and after discrepant resolution of this set, LAMP had a sensitivity of 100% (95% CI, 95.8%-100%) and a specificity of 100% (95% CI, 98.7%-100%). A cost-benefit analysis of reagents and labor suggests savings of up to USD$13 per specimen using a novel algorithm with LAMP screening.This work was supported by Calgary Laboratory Services.Calgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, Canada / University of Calgary. Department of Microbiology, Immunology, and Infectious Diseases. Calgary, Alberta, Canada;Calgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, CanadaCalgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, CanadaMcGill University. Department of Epidemiology, Biostatistics, and Occupational Health. Montreal, Quebec, Canada.University of Calgary. Department of Microbiology, Immunology, and Infectious Diseases. Calgary, Alberta, Canada / Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Pesquisas em Malária. Ananindeua, PA, Brasil.ProvLab Alberta. Edmonton, Alberta, Canada.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Laboratório de Pesquisas em Malária. Ananindeua, PA, Brasil.London School of Hygiene & Tropical Medicine. Faculty of Infectious & Tropical Diseases. Department of Immunology & Infection. London, UK.Calgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, Canada / University of Calgary, Calgary. Department Pathology and Laboratory Medicine. Alberta, Canada / University of Calgary. Department of Medicine. Calgary, Alberta, Canada.Calgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, Canada / University of Calgary. Department of Medicine. Calgary, Alberta, Canada.Calgary Laboratory Services. Clinical Section of Microbiology. Calgary, Alberta, Canada / University of Calgary. Department of Microbiology, Immunology, and Infectious Diseases. Calgary, Alberta, Canada / University of Calgary, Calgary. Department Pathology and Laboratory Medicine. Alberta, Canada / University of Calgary. Department of Medicine. Calgary, Alberta, Canada.engOxford OpenClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trialinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleMalária / diagnósticoMalária / transmissãoSaúde do ViajanteReação em Cadeia da PolimeraseTestes Sorológicos / métodosSensibilidade e EspecificidadeEstudos de Casos e Controlesinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdfClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdfapplication/pdf263188https://patua.iec.gov.br/bitstreams/5bbb1cf2-f69e-4fec-9d91-ef4149004569/downloadd4a8dfeea0322702cc587a60fce2cbe6MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/6fee2316-b8a4-4b83-96a1-711273578653/download11832eea31b16df8613079d742d61793MD52TEXTClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdf.txtClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdf.txtExtracted texttext/plain46499https://patua.iec.gov.br/bitstreams/737d4a63-70fc-4a8d-8891-10104fe5e270/download2d1bfcb05778bd170d805659f63f3bceMD55THUMBNAILClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdf.jpgClinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial.pdf.jpgGenerated Thumbnailimage/jpeg6430https://patua.iec.gov.br/bitstreams/a6f5b827-68dd-4822-8322-b6206fe451e7/download86a3112d7ccc87b90a9cded42d7d3672MD56iec/36322022-10-20 21:56:42.209oai:patua.iec.gov.br:iec/3632https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:56:42Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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 |
dc.title.pt_BR.fl_str_mv |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
title |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
spellingShingle |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial Cheaveau, James Malária / diagnóstico Malária / transmissão Saúde do Viajante Reação em Cadeia da Polimerase Testes Sorológicos / métodos Sensibilidade e Especificidade Estudos de Casos e Controles |
title_short |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
title_full |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
title_fullStr |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
title_full_unstemmed |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
title_sort |
Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial |
author |
Cheaveau, James |
author_facet |
Cheaveau, James Nguyen, Hong Chow, Barbara Marasinghe, Dewdunee Mohon, Abu Naser Yuan, Hong Viana, Giselle Maria Rachid Van Schalkwyk, Donelly Church, Deirdre Chan, Wilson Pillai, Dylan R |
author_role |
author |
author2 |
Nguyen, Hong Chow, Barbara Marasinghe, Dewdunee Mohon, Abu Naser Yuan, Hong Viana, Giselle Maria Rachid Van Schalkwyk, Donelly Church, Deirdre Chan, Wilson Pillai, Dylan R |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Cheaveau, James Nguyen, Hong Chow, Barbara Marasinghe, Dewdunee Mohon, Abu Naser Yuan, Hong Viana, Giselle Maria Rachid Van Schalkwyk, Donelly Church, Deirdre Chan, Wilson Pillai, Dylan R |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Malária / diagnóstico Malária / transmissão Saúde do Viajante Reação em Cadeia da Polimerase Testes Sorológicos / métodos Sensibilidade e Especificidade Estudos de Casos e Controles |
topic |
Malária / diagnóstico Malária / transmissão Saúde do Viajante Reação em Cadeia da Polimerase Testes Sorológicos / métodos Sensibilidade e Especificidade Estudos de Casos e Controles |
description |
The mainstay of malaria diagnosis relies on rapid diagnostic tests (RDTs) and microscopy, both of which lack analytical sensitivity. This leads to repeat testing to rule out malaria. A prospective diagnostic trial of the Meridian illumigene Malaria assay (loop-mediated isothermal amplification [LAMP]) was conducted comparing it with reference microscopy and RDTs (BinaxNOW Malaria) in returning travelers between June 2017 and January 2018. Returning travelers with signs and symptoms of malaria were enrolled in the study. RDTs, microscopy, and LAMP assays were performed simultaneously. A total of 298 patients (50.7% male; mean age, 32.5 years) were enrolled, most visiting friends and relatives (43.3%), presenting with fever (88.9%), not taking prophylaxis (82.9%), and treated as outpatients (84.1%). In the prospective arm (n = 348), LAMP had a sensitivity of 98.1% (95% confidence interval [CI], 90.0%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy. After discrepant resolution with real-time polymerase chain reaction, LAMP had a sensitivity of 100% (95% CI, 93.7%-100%) and a specificity of 100% (95% CI, 98.7%-100%) vs microscopy. After discrepant resolution, RDTs had a sensitivity of 83.3% (95% CI, 58.6%-96.4%) and a specificity of 96.2% (95% CI, 93.2%-98.1%) vs microscopy. When including retrospective specimens (n = 377), LAMP had a sensitivity of 98.8% (95% CI, 93.2%-100%) and a specificity of 97.6% (95% CI, 95.2%-99.1%) vs microscopy, and after discrepant resolution of this set, LAMP had a sensitivity of 100% (95% CI, 95.8%-100%) and a specificity of 100% (95% CI, 98.7%-100%). A cost-benefit analysis of reagents and labor suggests savings of up to USD$13 per specimen using a novel algorithm with LAMP screening. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018 |
dc.date.accessioned.fl_str_mv |
2019-04-04T11:24:16Z |
dc.date.available.fl_str_mv |
2019-04-04T11:24:16Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
CHEAVEAU, James et al. Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial. Open Forum Infectious Diseases, v. 5, n. 11, p. 1-9, Oct. 2018. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3632 |
dc.identifier.issn.-.fl_str_mv |
2328-8957 |
dc.identifier.doi.-.fl_str_mv |
10.1093/ofid/ofy260 |
identifier_str_mv |
CHEAVEAU, James et al. Clinical validation of a commercial LAMP Test for ruling out Malaria in returning travelers: a prospective diagnostic trial. Open Forum Infectious Diseases, v. 5, n. 11, p. 1-9, Oct. 2018. 2328-8957 10.1093/ofid/ofy260 |
url |
https://patua.iec.gov.br/handle/iec/3632 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Oxford Open |
publisher.none.fl_str_mv |
Oxford Open |
dc.source.none.fl_str_mv |
reponame:Repositório Digital do Instituto Evandro Chagas (Patuá) instname:Instituto Evandro Chagas (IEC) instacron:IEC |
instname_str |
Instituto Evandro Chagas (IEC) |
instacron_str |
IEC |
institution |
IEC |
reponame_str |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
collection |
Repositório Digital do Instituto Evandro Chagas (Patuá) |
bitstream.url.fl_str_mv |
https://patua.iec.gov.br/bitstreams/5bbb1cf2-f69e-4fec-9d91-ef4149004569/download https://patua.iec.gov.br/bitstreams/6fee2316-b8a4-4b83-96a1-711273578653/download https://patua.iec.gov.br/bitstreams/737d4a63-70fc-4a8d-8891-10104fe5e270/download https://patua.iec.gov.br/bitstreams/a6f5b827-68dd-4822-8322-b6206fe451e7/download |
bitstream.checksum.fl_str_mv |
d4a8dfeea0322702cc587a60fce2cbe6 11832eea31b16df8613079d742d61793 2d1bfcb05778bd170d805659f63f3bce 86a3112d7ccc87b90a9cded42d7d3672 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC) |
repository.mail.fl_str_mv |
clariceneta@iec.gov.br || Biblioteca@iec.gov.br |
_version_ |
1809190043786412032 |