Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Digital do Instituto Evandro Chagas (Patuá) |
Texto Completo: | https://patua.iec.gov.br/handle/iec/3857 |
Resumo: | The Anelloviridae comprises single-stranded DNA viruses currently grouped in sixty-eight species classified in twelve genera. They have been found in many vertebrate hosts including primates. In this study, we describe the application of the high-throughput sequencing to examine the frequency and diversity of anelloviruses in rodents, bats and opossums captured in São Paulo State, Brazil. We report a total of twenty-six anelloviruses with sixteen nearly complete genomes and ten partial genomes, which include eleven potential novel species identified in rodents (Cricetidae), bats (Molossidae and Phyllostomidae), and opossums (Didelphidae). We also propose the inclusion of two potential new genera within the Anelloviridae family, provisionally named Omegatorquevirus and Sigmatorquevirus, including six and three novel species of anelloviruses, respectively. In summary, this study expands the diversity and the host range of the known anelloviruses. |
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Souza, William Marciel deFumagalli, Marcílio JorgeAraujo, Jansen deSantos Jr, Gilberto SabinoMaia, Felipe Gonçalves MottaRomeiro, Marilia FarignoliModha, SejalNardi, Marcello SchiavoQueiroz, Luzia HelenaDurigon, Edison LuizNunes, Márcio Roberto TeixeiraMurcia, Pablo RamiroFigueiredo, Luiz Tadeu Moraes2019-08-27T18:40:40Z2019-08-27T18:40:40Z2018SOUZA, William Marciel de et al. Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae. Virology, v. 514, p. 9-17, Jan. 2018.0042-6822https://patua.iec.gov.br/handle/iec/385710.1016/j.virol.2017.11.001The Anelloviridae comprises single-stranded DNA viruses currently grouped in sixty-eight species classified in twelve genera. They have been found in many vertebrate hosts including primates. In this study, we describe the application of the high-throughput sequencing to examine the frequency and diversity of anelloviruses in rodents, bats and opossums captured in São Paulo State, Brazil. We report a total of twenty-six anelloviruses with sixteen nearly complete genomes and ten partial genomes, which include eleven potential novel species identified in rodents (Cricetidae), bats (Molossidae and Phyllostomidae), and opossums (Didelphidae). We also propose the inclusion of two potential new genera within the Anelloviridae family, provisionally named Omegatorquevirus and Sigmatorquevirus, including six and three novel species of anelloviruses, respectively. In summary, this study expands the diversity and the host range of the known anelloviruses.This work was supported by the Fundação de Amparo à Pesquisa do Estado de São Paulo, Brazil (Grant number. 13/14929-1, and Scholarships No. 12/24150-9; 15/05778-5; 16/01414-1; 14/20851-8; 06/00572-0; 08/06411-4; 11/06810-9; 11/22663-6; 16/02568-2, 06/ 00572-0). PRM was supported by the Medical Research Council of the United Kingdom (Grant MC_UU_120/14/9).University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, Brazil / MRC-University of Glasgow. Centre for Virus Research. Glasgow, UK.University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, Brazil.University of São Paulo,. Laboratory Institute of Biomedical Sciences. São Paulo, SP, Brazil.University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, Brazil.University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, Brazil / University of São Paulo. Institute of Biomedical Sciences. Department of Microbiology. São Paulo, SP, Brazil.University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, BrazilMRC-University of Glasgow. Centre for Virus Research. Glasgow, UK.Prefeitura de São Paulo. Divisão Técnica de Medicina Veterinária e Manejo da Fauna Silvestre. São Paulo, SP, Brazil.São Paulo State University. Faculty of Veterinary Medicine. Araçatuba, SP, Brazil.University of São Paulo. Laboratory Institute of Biomedical Sciences. São Paulo, SP, Brazil.Ministério da Saúde. Secretaria de Vigilância em Saúde. Instituto Evandro Chagas. Ananindeua, PA, Brasil / University of Texas Medical Branch. Department of Pathology. Galveston, TX, USA.MRC-University of Glasgow. Centre for Virus Research. Glasgow, UK.University of São Paulo. Ribeirão Preto Medical School. Virology Research Center. Ribeirão Preto, SP, Brazil.engElsevierDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridaeinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAnelloviridae / genéticaVírus de DNA / genéticaDoenças dos RoedoresRoedores / virologiaAnelloviridae / isolamento & purificaçãoAnelloviridae / genéticaGenoma Viral / genéticaSequenciamento de Nucleotídeos em Larga EscalaVariação GenéticaArvicolinae / virologiaQuirópteros / virologiaEspecificidade de Hospedeiro / genéticaInterações Hospedeiro-Patógenoinfo:eu-repo/semantics/openAccessreponame:Repositório Digital do Instituto Evandro Chagas (Patuá)instname:Instituto Evandro Chagas (IEC)instacron:IECORIGINALDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdfDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdfapplication/pdf1616222https://patua.iec.gov.br/bitstreams/9791c316-2aca-447b-9d2b-0ee3ee9b509e/download13a4c81b0b276db91f0934b03dc84bf4MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-82182https://patua.iec.gov.br/bitstreams/1be323f3-0a59-4c76-9ce6-6b646723e959/download11832eea31b16df8613079d742d61793MD52TEXTDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdf.txtDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdf.txtExtracted texttext/plain53673https://patua.iec.gov.br/bitstreams/43cbf12f-652c-4ca1-9e56-197ef9da32c5/download4b9022d0928b2f0cd7bf3c9be7aff5dcMD55THUMBNAILDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdf.jpgDiscovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae.pdf.jpgGenerated Thumbnailimage/jpeg5663https://patua.iec.gov.br/bitstreams/af1ccf04-c6b6-4585-a14d-d34a1d6814ff/downloadb0a772bb5c9f8dd2d02559f108f9f6e9MD56iec/38572022-10-20 21:16:35.875oai:patua.iec.gov.br:iec/3857https://patua.iec.gov.brRepositório InstitucionalPUBhttps://patua.iec.gov.br/oai/requestclariceneta@iec.gov.br || Biblioteca@iec.gov.bropendoar:2022-10-20T21:16:35Repositório Digital do Instituto Evandro Chagas (Patuá) - Instituto Evandro Chagas (IEC)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 |
dc.title.pt_BR.fl_str_mv |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
title |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
spellingShingle |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae Souza, William Marciel de Anelloviridae / genética Vírus de DNA / genética Doenças dos Roedores Roedores / virologia Anelloviridae / isolamento & purificação Anelloviridae / genética Genoma Viral / genética Sequenciamento de Nucleotídeos em Larga Escala Variação Genética Arvicolinae / virologia Quirópteros / virologia Especificidade de Hospedeiro / genética Interações Hospedeiro-Patógeno |
title_short |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
title_full |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
title_fullStr |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
title_full_unstemmed |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
title_sort |
Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae |
author |
Souza, William Marciel de |
author_facet |
Souza, William Marciel de Fumagalli, Marcílio Jorge Araujo, Jansen de Santos Jr, Gilberto Sabino Maia, Felipe Gonçalves Motta Romeiro, Marilia Farignoli Modha, Sejal Nardi, Marcello Schiavo Queiroz, Luzia Helena Durigon, Edison Luiz Nunes, Márcio Roberto Teixeira Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes |
author_role |
author |
author2 |
Fumagalli, Marcílio Jorge Araujo, Jansen de Santos Jr, Gilberto Sabino Maia, Felipe Gonçalves Motta Romeiro, Marilia Farignoli Modha, Sejal Nardi, Marcello Schiavo Queiroz, Luzia Helena Durigon, Edison Luiz Nunes, Márcio Roberto Teixeira Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes |
author2_role |
author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Souza, William Marciel de Fumagalli, Marcílio Jorge Araujo, Jansen de Santos Jr, Gilberto Sabino Maia, Felipe Gonçalves Motta Romeiro, Marilia Farignoli Modha, Sejal Nardi, Marcello Schiavo Queiroz, Luzia Helena Durigon, Edison Luiz Nunes, Márcio Roberto Teixeira Murcia, Pablo Ramiro Figueiredo, Luiz Tadeu Moraes |
dc.subject.decsPrimary.pt_BR.fl_str_mv |
Anelloviridae / genética Vírus de DNA / genética Doenças dos Roedores Roedores / virologia Anelloviridae / isolamento & purificação Anelloviridae / genética Genoma Viral / genética Sequenciamento de Nucleotídeos em Larga Escala Variação Genética Arvicolinae / virologia Quirópteros / virologia Especificidade de Hospedeiro / genética Interações Hospedeiro-Patógeno |
topic |
Anelloviridae / genética Vírus de DNA / genética Doenças dos Roedores Roedores / virologia Anelloviridae / isolamento & purificação Anelloviridae / genética Genoma Viral / genética Sequenciamento de Nucleotídeos em Larga Escala Variação Genética Arvicolinae / virologia Quirópteros / virologia Especificidade de Hospedeiro / genética Interações Hospedeiro-Patógeno |
description |
The Anelloviridae comprises single-stranded DNA viruses currently grouped in sixty-eight species classified in twelve genera. They have been found in many vertebrate hosts including primates. In this study, we describe the application of the high-throughput sequencing to examine the frequency and diversity of anelloviruses in rodents, bats and opossums captured in São Paulo State, Brazil. We report a total of twenty-six anelloviruses with sixteen nearly complete genomes and ten partial genomes, which include eleven potential novel species identified in rodents (Cricetidae), bats (Molossidae and Phyllostomidae), and opossums (Didelphidae). We also propose the inclusion of two potential new genera within the Anelloviridae family, provisionally named Omegatorquevirus and Sigmatorquevirus, including six and three novel species of anelloviruses, respectively. In summary, this study expands the diversity and the host range of the known anelloviruses. |
publishDate |
2018 |
dc.date.issued.fl_str_mv |
2018 |
dc.date.accessioned.fl_str_mv |
2019-08-27T18:40:40Z |
dc.date.available.fl_str_mv |
2019-08-27T18:40:40Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
SOUZA, William Marciel de et al. Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae. Virology, v. 514, p. 9-17, Jan. 2018. |
dc.identifier.uri.fl_str_mv |
https://patua.iec.gov.br/handle/iec/3857 |
dc.identifier.issn.-.fl_str_mv |
0042-6822 |
dc.identifier.doi.-.fl_str_mv |
10.1016/j.virol.2017.11.001 |
identifier_str_mv |
SOUZA, William Marciel de et al. Discovery of novel anelloviruses in small mammals expands the host range and diversity of the Anelloviridae. Virology, v. 514, p. 9-17, Jan. 2018. 0042-6822 10.1016/j.virol.2017.11.001 |
url |
https://patua.iec.gov.br/handle/iec/3857 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Elsevier |
publisher.none.fl_str_mv |
Elsevier |
dc.source.none.fl_str_mv |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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Repositório Digital do Instituto Evandro Chagas (Patuá) |
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