Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Journal of Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182 |
Resumo: | Abstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country. |
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Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, PakistanDNA barcodingCOIPlatyceps rhodorachis kashmirensisPlatyceps ventromaculatus bengalensisPtyas mucosusAbstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country.Instituto Internacional de Ecologia2023-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182Brazilian Journal of Biology v.83 2023reponame:Brazilian Journal of Biologyinstname:Instituto Internacional de Ecologia (IIE)instacron:IIE10.1590/1519-6984.246243info:eu-repo/semantics/openAccessMalik,S.Javid,A.Hamidullah,Iqbal,M. A.Hussain,A.Bukhari,S. M.Chaber,A. L.Hemmatzadeh,F.Ismat,N.Ali,A.Azam,S. M.Mustafa,G.Hussain,S.Ahmad,U.Ahmad,A.Ali,W.eng2021-08-25T00:00:00Zoai:scielo:S1519-69842023000100182Revistahttps://www.scielo.br/j/bjb/https://old.scielo.br/oai/scielo-oai.phpbjb@bjb.com.br||bjb@bjb.com.br1678-43751519-6984opendoar:2021-08-25T00:00Brazilian Journal of Biology - Instituto Internacional de Ecologia (IIE)false |
dc.title.none.fl_str_mv |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
title |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
spellingShingle |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan Malik,S. DNA barcoding COI Platyceps rhodorachis kashmirensis Platyceps ventromaculatus bengalensis Ptyas mucosus |
title_short |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
title_full |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
title_fullStr |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
title_full_unstemmed |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
title_sort |
Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan |
author |
Malik,S. |
author_facet |
Malik,S. Javid,A. Hamidullah, Iqbal,M. A. Hussain,A. Bukhari,S. M. Chaber,A. L. Hemmatzadeh,F. Ismat,N. Ali,A. Azam,S. M. Mustafa,G. Hussain,S. Ahmad,U. Ahmad,A. Ali,W. |
author_role |
author |
author2 |
Javid,A. Hamidullah, Iqbal,M. A. Hussain,A. Bukhari,S. M. Chaber,A. L. Hemmatzadeh,F. Ismat,N. Ali,A. Azam,S. M. Mustafa,G. Hussain,S. Ahmad,U. Ahmad,A. Ali,W. |
author2_role |
author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Malik,S. Javid,A. Hamidullah, Iqbal,M. A. Hussain,A. Bukhari,S. M. Chaber,A. L. Hemmatzadeh,F. Ismat,N. Ali,A. Azam,S. M. Mustafa,G. Hussain,S. Ahmad,U. Ahmad,A. Ali,W. |
dc.subject.por.fl_str_mv |
DNA barcoding COI Platyceps rhodorachis kashmirensis Platyceps ventromaculatus bengalensis Ptyas mucosus |
topic |
DNA barcoding COI Platyceps rhodorachis kashmirensis Platyceps ventromaculatus bengalensis Ptyas mucosus |
description |
Abstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1519-6984.246243 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto Internacional de Ecologia |
publisher.none.fl_str_mv |
Instituto Internacional de Ecologia |
dc.source.none.fl_str_mv |
Brazilian Journal of Biology v.83 2023 reponame:Brazilian Journal of Biology instname:Instituto Internacional de Ecologia (IIE) instacron:IIE |
instname_str |
Instituto Internacional de Ecologia (IIE) |
instacron_str |
IIE |
institution |
IIE |
reponame_str |
Brazilian Journal of Biology |
collection |
Brazilian Journal of Biology |
repository.name.fl_str_mv |
Brazilian Journal of Biology - Instituto Internacional de Ecologia (IIE) |
repository.mail.fl_str_mv |
bjb@bjb.com.br||bjb@bjb.com.br |
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1752129889835679744 |