Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan

Detalhes bibliográficos
Autor(a) principal: Malik,S.
Data de Publicação: 2023
Outros Autores: Javid,A., Hamidullah, Iqbal,M. A., Hussain,A., Bukhari,S. M., Chaber,A. L., Hemmatzadeh,F., Ismat,N., Ali,A., Azam,S. M., Mustafa,G., Hussain,S., Ahmad,U., Ahmad,A., Ali,W.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182
Resumo: Abstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country.
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spelling Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, PakistanDNA barcodingCOIPlatyceps rhodorachis kashmirensisPlatyceps ventromaculatus bengalensisPtyas mucosusAbstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country.Instituto Internacional de Ecologia2023-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182Brazilian Journal of Biology v.83 2023reponame:Brazilian Journal of Biologyinstname:Instituto Internacional de Ecologia (IIE)instacron:IIE10.1590/1519-6984.246243info:eu-repo/semantics/openAccessMalik,S.Javid,A.Hamidullah,Iqbal,M. A.Hussain,A.Bukhari,S. M.Chaber,A. L.Hemmatzadeh,F.Ismat,N.Ali,A.Azam,S. M.Mustafa,G.Hussain,S.Ahmad,U.Ahmad,A.Ali,W.eng2021-08-25T00:00:00Zoai:scielo:S1519-69842023000100182Revistahttps://www.scielo.br/j/bjb/https://old.scielo.br/oai/scielo-oai.phpbjb@bjb.com.br||bjb@bjb.com.br1678-43751519-6984opendoar:2021-08-25T00:00Brazilian Journal of Biology - Instituto Internacional de Ecologia (IIE)false
dc.title.none.fl_str_mv Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
title Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
spellingShingle Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
Malik,S.
DNA barcoding
COI
Platyceps rhodorachis kashmirensis
Platyceps ventromaculatus bengalensis
Ptyas mucosus
title_short Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
title_full Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
title_fullStr Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
title_full_unstemmed Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
title_sort Phylogeography of cliff racer (Platyceps rhodorachis Jan, 1865) from Punjab, Pakistan
author Malik,S.
author_facet Malik,S.
Javid,A.
Hamidullah,
Iqbal,M. A.
Hussain,A.
Bukhari,S. M.
Chaber,A. L.
Hemmatzadeh,F.
Ismat,N.
Ali,A.
Azam,S. M.
Mustafa,G.
Hussain,S.
Ahmad,U.
Ahmad,A.
Ali,W.
author_role author
author2 Javid,A.
Hamidullah,
Iqbal,M. A.
Hussain,A.
Bukhari,S. M.
Chaber,A. L.
Hemmatzadeh,F.
Ismat,N.
Ali,A.
Azam,S. M.
Mustafa,G.
Hussain,S.
Ahmad,U.
Ahmad,A.
Ali,W.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Malik,S.
Javid,A.
Hamidullah,
Iqbal,M. A.
Hussain,A.
Bukhari,S. M.
Chaber,A. L.
Hemmatzadeh,F.
Ismat,N.
Ali,A.
Azam,S. M.
Mustafa,G.
Hussain,S.
Ahmad,U.
Ahmad,A.
Ali,W.
dc.subject.por.fl_str_mv DNA barcoding
COI
Platyceps rhodorachis kashmirensis
Platyceps ventromaculatus bengalensis
Ptyas mucosus
topic DNA barcoding
COI
Platyceps rhodorachis kashmirensis
Platyceps ventromaculatus bengalensis
Ptyas mucosus
description Abstract The present study reports the existence of cliff racer, Platyceps rhodorachis from the plains of Punjab, Pakistan. A total of 10 specimens were captured during the field surveys from June to September, 2018 from different sites of Punjab. Platyceps rhodorachis was identify on the basis of morphology and confirmed through COI gene sequences. The obtained DNA sequences have shown reliable and exact species identification. Newly produced DNA sequences of Platyceps rhodorachis were submitted to GenBank and accession numbers were obtained (MK936174.1, MK941839.1 and MT790210.1). N-J tree based on COI sequences of Platyceps rhodorachis clearly separated as out-group with other members of family Colubridae based on p-distance. The intra-specific genetic variation ranges from 12% to 18%. The DNA sequences of Platyceps rhodorachis kashmirensis, Platyceps rhodorachis ladacensis, Platyceps ventromaculatus, Platyceps ventromaculatus bengalensis and Platyceps ventromaculatus indusai are not available at NCBI to validate their taxonomic positions. In our recommendations, a large scale molecular based identification of Pakistan’s herpetofauna is required to report more new or subspecies from country.
publishDate 2023
dc.date.none.fl_str_mv 2023-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1519-69842023000100182
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1519-6984.246243
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto Internacional de Ecologia
publisher.none.fl_str_mv Instituto Internacional de Ecologia
dc.source.none.fl_str_mv Brazilian Journal of Biology v.83 2023
reponame:Brazilian Journal of Biology
instname:Instituto Internacional de Ecologia (IIE)
instacron:IIE
instname_str Instituto Internacional de Ecologia (IIE)
instacron_str IIE
institution IIE
reponame_str Brazilian Journal of Biology
collection Brazilian Journal of Biology
repository.name.fl_str_mv Brazilian Journal of Biology - Instituto Internacional de Ecologia (IIE)
repository.mail.fl_str_mv bjb@bjb.com.br||bjb@bjb.com.br
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