Automatic segmentation of brain tumors in magnetic resonance imaging
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Einstein (São Paulo) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243 |
Resumo: | ABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images. |
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Automatic segmentation of brain tumors in magnetic resonance imagingDiagnostic imagingBrain neoplasmsImage processing, computer-assistedMagnetic resonance imagingComputer simulationABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images.Instituto Israelita de Ensino e Pesquisa Albert Einstein2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243einstein (São Paulo) v.18 2020reponame:Einstein (São Paulo)instname:Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)instacron:IIEPAE10.31744/einstein_journal/2020ao4948info:eu-repo/semantics/openAccessMascarenhas,Layse RibeiroRibeiro Júnior,Audenor dos SantosRamos,Rodrigo Pereiraeng2020-03-05T00:00:00Zoai:scielo:S1679-45082020000100243Revistahttps://journal.einstein.br/pt-br/ONGhttps://old.scielo.br/oai/scielo-oai.php||revista@einstein.br2317-63851679-4508opendoar:2020-03-05T00:00Einstein (São Paulo) - Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)false |
dc.title.none.fl_str_mv |
Automatic segmentation of brain tumors in magnetic resonance imaging |
title |
Automatic segmentation of brain tumors in magnetic resonance imaging |
spellingShingle |
Automatic segmentation of brain tumors in magnetic resonance imaging Mascarenhas,Layse Ribeiro Diagnostic imaging Brain neoplasms Image processing, computer-assisted Magnetic resonance imaging Computer simulation |
title_short |
Automatic segmentation of brain tumors in magnetic resonance imaging |
title_full |
Automatic segmentation of brain tumors in magnetic resonance imaging |
title_fullStr |
Automatic segmentation of brain tumors in magnetic resonance imaging |
title_full_unstemmed |
Automatic segmentation of brain tumors in magnetic resonance imaging |
title_sort |
Automatic segmentation of brain tumors in magnetic resonance imaging |
author |
Mascarenhas,Layse Ribeiro |
author_facet |
Mascarenhas,Layse Ribeiro Ribeiro Júnior,Audenor dos Santos Ramos,Rodrigo Pereira |
author_role |
author |
author2 |
Ribeiro Júnior,Audenor dos Santos Ramos,Rodrigo Pereira |
author2_role |
author author |
dc.contributor.author.fl_str_mv |
Mascarenhas,Layse Ribeiro Ribeiro Júnior,Audenor dos Santos Ramos,Rodrigo Pereira |
dc.subject.por.fl_str_mv |
Diagnostic imaging Brain neoplasms Image processing, computer-assisted Magnetic resonance imaging Computer simulation |
topic |
Diagnostic imaging Brain neoplasms Image processing, computer-assisted Magnetic resonance imaging Computer simulation |
description |
ABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.31744/einstein_journal/2020ao4948 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Instituto Israelita de Ensino e Pesquisa Albert Einstein |
publisher.none.fl_str_mv |
Instituto Israelita de Ensino e Pesquisa Albert Einstein |
dc.source.none.fl_str_mv |
einstein (São Paulo) v.18 2020 reponame:Einstein (São Paulo) instname:Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE) instacron:IIEPAE |
instname_str |
Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE) |
instacron_str |
IIEPAE |
institution |
IIEPAE |
reponame_str |
Einstein (São Paulo) |
collection |
Einstein (São Paulo) |
repository.name.fl_str_mv |
Einstein (São Paulo) - Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE) |
repository.mail.fl_str_mv |
||revista@einstein.br |
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1752129910089973760 |