Automatic segmentation of brain tumors in magnetic resonance imaging

Detalhes bibliográficos
Autor(a) principal: Mascarenhas,Layse Ribeiro
Data de Publicação: 2020
Outros Autores: Ribeiro Júnior,Audenor dos Santos, Ramos,Rodrigo Pereira
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Einstein (São Paulo)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243
Resumo: ABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images.
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spelling Automatic segmentation of brain tumors in magnetic resonance imagingDiagnostic imagingBrain neoplasmsImage processing, computer-assistedMagnetic resonance imagingComputer simulationABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images.Instituto Israelita de Ensino e Pesquisa Albert Einstein2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243einstein (São Paulo) v.18 2020reponame:Einstein (São Paulo)instname:Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)instacron:IIEPAE10.31744/einstein_journal/2020ao4948info:eu-repo/semantics/openAccessMascarenhas,Layse RibeiroRibeiro Júnior,Audenor dos SantosRamos,Rodrigo Pereiraeng2020-03-05T00:00:00Zoai:scielo:S1679-45082020000100243Revistahttps://journal.einstein.br/pt-br/ONGhttps://old.scielo.br/oai/scielo-oai.php||revista@einstein.br2317-63851679-4508opendoar:2020-03-05T00:00Einstein (São Paulo) - Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)false
dc.title.none.fl_str_mv Automatic segmentation of brain tumors in magnetic resonance imaging
title Automatic segmentation of brain tumors in magnetic resonance imaging
spellingShingle Automatic segmentation of brain tumors in magnetic resonance imaging
Mascarenhas,Layse Ribeiro
Diagnostic imaging
Brain neoplasms
Image processing, computer-assisted
Magnetic resonance imaging
Computer simulation
title_short Automatic segmentation of brain tumors in magnetic resonance imaging
title_full Automatic segmentation of brain tumors in magnetic resonance imaging
title_fullStr Automatic segmentation of brain tumors in magnetic resonance imaging
title_full_unstemmed Automatic segmentation of brain tumors in magnetic resonance imaging
title_sort Automatic segmentation of brain tumors in magnetic resonance imaging
author Mascarenhas,Layse Ribeiro
author_facet Mascarenhas,Layse Ribeiro
Ribeiro Júnior,Audenor dos Santos
Ramos,Rodrigo Pereira
author_role author
author2 Ribeiro Júnior,Audenor dos Santos
Ramos,Rodrigo Pereira
author2_role author
author
dc.contributor.author.fl_str_mv Mascarenhas,Layse Ribeiro
Ribeiro Júnior,Audenor dos Santos
Ramos,Rodrigo Pereira
dc.subject.por.fl_str_mv Diagnostic imaging
Brain neoplasms
Image processing, computer-assisted
Magnetic resonance imaging
Computer simulation
topic Diagnostic imaging
Brain neoplasms
Image processing, computer-assisted
Magnetic resonance imaging
Computer simulation
description ABSTRACT Objective To develop a computational algorithm applied to magnetic resonance imaging for automatic segmentation of brain tumors. Methods A total of 130 magnetic resonance images were used in the T1c, T2 and FSPRG T1C sequences and in the axial, sagittal and coronal planes of patients with brain cancer. The algorithms employed contrast correction, histogram normalization and binarization techniques to disconnect adjacent structures from the brain and enhance the region of interest. Automatic segmentation was performed through detection by coordinates and arithmetic mean of the area. Morphological operators were used to eliminate undesirable elements and reconstruct the shape and texture of the tumor. The results were compared with manual segmentations by two radiologists to determine the efficacy of the algorithms implemented. Results The correlated correspondence between the segmentation obtained and the gold standard was 89.23%. Conclusion It is possible to locate and define the tumor region automatically with no the need for user interaction, based on two innovative methods to detect brain extreme sites and exclude non-tumor tissues on magnetic resonance images.
publishDate 2020
dc.date.none.fl_str_mv 2020-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1679-45082020000100243
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.31744/einstein_journal/2020ao4948
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dc.publisher.none.fl_str_mv Instituto Israelita de Ensino e Pesquisa Albert Einstein
publisher.none.fl_str_mv Instituto Israelita de Ensino e Pesquisa Albert Einstein
dc.source.none.fl_str_mv einstein (São Paulo) v.18 2020
reponame:Einstein (São Paulo)
instname:Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)
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instacron_str IIEPAE
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reponame_str Einstein (São Paulo)
collection Einstein (São Paulo)
repository.name.fl_str_mv Einstein (São Paulo) - Instituto Israelita de Ensino e Pesquisa Albert Einstein (IIEPAE)
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