Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista do Instituto de Medicina Tropical de São Paulo |
Texto Completo: | https://www.revistas.usp.br/rimtsp/article/view/195676 |
Resumo: | This study represents the first overview of the epidemiological dynamics of SARS-CoV-2 in Espirito Santo (ES) State, Brazil, filling in knowledge on this topic, observing data collected in the State, and aiming at understanding the epidemiological dynamics of the virus in ES, as well as its possible routes of transmission and dissemination. . Our results highlight that, so far, nine lineages have been identified with ES State. The B.1.1.33 lineage was the first with the highest occurrence in ES, remaining predominant until September 2020. The second predominant lineage was Gamma, representing 45% of the samples. The Delta lineage appears on the State scene, proving to be the next dominant lineage. This research allowed us to understand how the lineages advanced and were distributed in the State, which is important for future work, also making it possible to guide sanitary control measures. Data analyses were made through the GISAID database for ES State showed that the pandemic in the State has been evolving dynamically with lineage replacements over the months since the first notification. |
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Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border StatesSARS-CoV-2COVID-19LineagesEspirito SantoBrazilThis study represents the first overview of the epidemiological dynamics of SARS-CoV-2 in Espirito Santo (ES) State, Brazil, filling in knowledge on this topic, observing data collected in the State, and aiming at understanding the epidemiological dynamics of the virus in ES, as well as its possible routes of transmission and dissemination. . Our results highlight that, so far, nine lineages have been identified with ES State. The B.1.1.33 lineage was the first with the highest occurrence in ES, remaining predominant until September 2020. The second predominant lineage was Gamma, representing 45% of the samples. The Delta lineage appears on the State scene, proving to be the next dominant lineage. This research allowed us to understand how the lineages advanced and were distributed in the State, which is important for future work, also making it possible to guide sanitary control measures. Data analyses were made through the GISAID database for ES State showed that the pandemic in the State has been evolving dynamically with lineage replacements over the months since the first notification.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2022-05-16info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/19567610.1590/S1678-9946202264024 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 64 (2022); e24Revista do Instituto de Medicina Tropical de São Paulo; Vol. 64 (2022); e24Revista do Instituto de Medicina Tropical de São Paulo; v. 64 (2022); e241678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/195676/180634Copyright (c) 2022 Renata Torezani, Aura Marcela Corredor Vargas, Juliana Santa Ardisson, Milenna Machado Pirovani, Pedro Henrique Dias dos Santos, Greiciane Gaburro Paneto, Teodiano Freire Bastos-Filhohttps://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccessTorezani, Renata Vargas, Aura Marcela Corredor Ardisson, Juliana Santa Pirovani, Milenna Machado Santos, Pedro Henrique Dias dos Paneto, Greiciane Gaburro Bastos-Filho, Teodiano Freire 2022-10-10T13:01:46Zoai:revistas.usp.br:article/195676Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:53:02.469264Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true |
dc.title.none.fl_str_mv |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
title |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
spellingShingle |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States Torezani, Renata SARS-CoV-2 COVID-19 Lineages Espirito Santo Brazil |
title_short |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
title_full |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
title_fullStr |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
title_full_unstemmed |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
title_sort |
Molecular dynamics of the COVID-19 pandemic in Espirito Santo (Brazil) and border States |
author |
Torezani, Renata |
author_facet |
Torezani, Renata Vargas, Aura Marcela Corredor Ardisson, Juliana Santa Pirovani, Milenna Machado Santos, Pedro Henrique Dias dos Paneto, Greiciane Gaburro Bastos-Filho, Teodiano Freire |
author_role |
author |
author2 |
Vargas, Aura Marcela Corredor Ardisson, Juliana Santa Pirovani, Milenna Machado Santos, Pedro Henrique Dias dos Paneto, Greiciane Gaburro Bastos-Filho, Teodiano Freire |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Torezani, Renata Vargas, Aura Marcela Corredor Ardisson, Juliana Santa Pirovani, Milenna Machado Santos, Pedro Henrique Dias dos Paneto, Greiciane Gaburro Bastos-Filho, Teodiano Freire |
dc.subject.por.fl_str_mv |
SARS-CoV-2 COVID-19 Lineages Espirito Santo Brazil |
topic |
SARS-CoV-2 COVID-19 Lineages Espirito Santo Brazil |
description |
This study represents the first overview of the epidemiological dynamics of SARS-CoV-2 in Espirito Santo (ES) State, Brazil, filling in knowledge on this topic, observing data collected in the State, and aiming at understanding the epidemiological dynamics of the virus in ES, as well as its possible routes of transmission and dissemination. . Our results highlight that, so far, nine lineages have been identified with ES State. The B.1.1.33 lineage was the first with the highest occurrence in ES, remaining predominant until September 2020. The second predominant lineage was Gamma, representing 45% of the samples. The Delta lineage appears on the State scene, proving to be the next dominant lineage. This research allowed us to understand how the lineages advanced and were distributed in the State, which is important for future work, also making it possible to guide sanitary control measures. Data analyses were made through the GISAID database for ES State showed that the pandemic in the State has been evolving dynamically with lineage replacements over the months since the first notification. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-05-16 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/195676 10.1590/S1678-9946202264024 |
url |
https://www.revistas.usp.br/rimtsp/article/view/195676 |
identifier_str_mv |
10.1590/S1678-9946202264024 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/195676/180634 |
dc.rights.driver.fl_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
https://creativecommons.org/licenses/by-nc/4.0 |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
dc.source.none.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 64 (2022); e24 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 64 (2022); e24 Revista do Instituto de Medicina Tropical de São Paulo; v. 64 (2022); e24 1678-9946 0036-4665 reponame:Revista do Instituto de Medicina Tropical de São Paulo instname:Instituto de Medicina Tropical (IMT) instacron:IMT |
instname_str |
Instituto de Medicina Tropical (IMT) |
instacron_str |
IMT |
institution |
IMT |
reponame_str |
Revista do Instituto de Medicina Tropical de São Paulo |
collection |
Revista do Instituto de Medicina Tropical de São Paulo |
repository.name.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT) |
repository.mail.fl_str_mv |
||revimtsp@usp.br |
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1798951637109178368 |