Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic

Detalhes bibliográficos
Autor(a) principal: Martínez-Hernández, Fernando
Data de Publicação: 2024
Outros Autores: Gonzalez-Arenas, Nelly Raquel, Cervantes, José Antonio Ocampo, Villalobos, Guiehdani, Olivo-Diaz, Angelica, Rendon-Franco, Emilio, Valdovinos, Mirza Romero, Muñoz-Garcia, Claudia Irais
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista do Instituto de Medicina Tropical de São Paulo
Texto Completo: https://www.revistas.usp.br/rimtsp/article/view/221801
Resumo: Currently, there are some concerns about the situation and, in particular, about the future of the COVID-19 pandemic and the new emerging variants of SARS-CoV-2. Rodents are an example of synanthropic animals in urban environments that harbor important zoonoses. Although the molecular identification of SARS-CoV-2 in Rattus norvegicus from New York City had been reported, in other studies, urban wild rodents infected with this virus have not been found. This study aimed to molecularly identify the presence of SARS-CoV-2 in urban wild rodents from Mexico City, trapped along a water channel of a public park as part of a pest control program, at the beginning of the COVID-19 pandemic, during the fall and winter of 2020. Up to 33 Mus musculus and 52 R. norvegicus were captured and euthanized, large intestine samples with feces from the animals were obtained. RNAs were obtained and subjected to qRT-PCR for SARS-CoV-2 identification and threshold cycle (Ct) values were obtained. Four mice (12.1%) and three rats (5.8%) were positive, three rodents exhibited Ct<30. Our results on the frequency of SARS-CoV-2 in urban rats are in line with other previous reports. Thus, similar to other authors, we suggest that surveillance for the detection of SARS-CoV-2 in urban wild rodents, as sentinel animals, should be maintained.
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spelling Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemicSARS-CoV-2Rattus norvegicusMus musculusSynanthropic animalsUrban environmentsCurrently, there are some concerns about the situation and, in particular, about the future of the COVID-19 pandemic and the new emerging variants of SARS-CoV-2. Rodents are an example of synanthropic animals in urban environments that harbor important zoonoses. Although the molecular identification of SARS-CoV-2 in Rattus norvegicus from New York City had been reported, in other studies, urban wild rodents infected with this virus have not been found. This study aimed to molecularly identify the presence of SARS-CoV-2 in urban wild rodents from Mexico City, trapped along a water channel of a public park as part of a pest control program, at the beginning of the COVID-19 pandemic, during the fall and winter of 2020. Up to 33 Mus musculus and 52 R. norvegicus were captured and euthanized, large intestine samples with feces from the animals were obtained. RNAs were obtained and subjected to qRT-PCR for SARS-CoV-2 identification and threshold cycle (Ct) values were obtained. Four mice (12.1%) and three rats (5.8%) were positive, three rodents exhibited Ct<30. Our results on the frequency of SARS-CoV-2 in urban rats are in line with other previous reports. Thus, similar to other authors, we suggest that surveillance for the detection of SARS-CoV-2 in urban wild rodents, as sentinel animals, should be maintained.Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2024-02-06info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/22180110.1590/S1678-9946202466008 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 66 (2024); e08Revista do Instituto de Medicina Tropical de São Paulo; v. 66 (2024); e08Revista do Instituto de Medicina Tropical de São Paulo; Vol. 66 (2024); e081678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/221801/202714Copyright (c) 2024 Fernando Martínez-Hernández, Nelly Raquel Gonzalez-Arenas, José Antonio Ocampo Cervantes, Guiehdani Villalobos, Angelica Olivo-Diaz, Emilio Rendon-Franco, Mirza Romero Valdovinos, Claudia Irais Muñoz-Garciahttps://creativecommons.org/licenses/by-nc/4.0info:eu-repo/semantics/openAccess Martínez-Hernández, FernandoGonzalez-Arenas, Nelly Raquel Cervantes, José Antonio Ocampo Villalobos, Guiehdani Olivo-Diaz, Angelica Rendon-Franco, Emilio Valdovinos, Mirza Romero Muñoz-Garcia, Claudia Irais 2024-03-20T14:09:30Zoai:revistas.usp.br:article/221801Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2024-03-20T14:09:30Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)false
dc.title.none.fl_str_mv Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
title Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
spellingShingle Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
Martínez-Hernández, Fernando
SARS-CoV-2
Rattus norvegicus
Mus musculus
Synanthropic animals
Urban environments
title_short Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
title_full Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
title_fullStr Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
title_full_unstemmed Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
title_sort Identification of SARS-CoV-2 in urban rodents from Southern Mexico City at the beginning of the COVID-19 pandemic
author Martínez-Hernández, Fernando
author_facet Martínez-Hernández, Fernando
Gonzalez-Arenas, Nelly Raquel
Cervantes, José Antonio Ocampo
Villalobos, Guiehdani
Olivo-Diaz, Angelica
Rendon-Franco, Emilio
Valdovinos, Mirza Romero
Muñoz-Garcia, Claudia Irais
author_role author
author2 Gonzalez-Arenas, Nelly Raquel
Cervantes, José Antonio Ocampo
Villalobos, Guiehdani
Olivo-Diaz, Angelica
Rendon-Franco, Emilio
Valdovinos, Mirza Romero
Muñoz-Garcia, Claudia Irais
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Martínez-Hernández, Fernando
Gonzalez-Arenas, Nelly Raquel
Cervantes, José Antonio Ocampo
Villalobos, Guiehdani
Olivo-Diaz, Angelica
Rendon-Franco, Emilio
Valdovinos, Mirza Romero
Muñoz-Garcia, Claudia Irais
dc.subject.por.fl_str_mv SARS-CoV-2
Rattus norvegicus
Mus musculus
Synanthropic animals
Urban environments
topic SARS-CoV-2
Rattus norvegicus
Mus musculus
Synanthropic animals
Urban environments
description Currently, there are some concerns about the situation and, in particular, about the future of the COVID-19 pandemic and the new emerging variants of SARS-CoV-2. Rodents are an example of synanthropic animals in urban environments that harbor important zoonoses. Although the molecular identification of SARS-CoV-2 in Rattus norvegicus from New York City had been reported, in other studies, urban wild rodents infected with this virus have not been found. This study aimed to molecularly identify the presence of SARS-CoV-2 in urban wild rodents from Mexico City, trapped along a water channel of a public park as part of a pest control program, at the beginning of the COVID-19 pandemic, during the fall and winter of 2020. Up to 33 Mus musculus and 52 R. norvegicus were captured and euthanized, large intestine samples with feces from the animals were obtained. RNAs were obtained and subjected to qRT-PCR for SARS-CoV-2 identification and threshold cycle (Ct) values were obtained. Four mice (12.1%) and three rats (5.8%) were positive, three rodents exhibited Ct<30. Our results on the frequency of SARS-CoV-2 in urban rats are in line with other previous reports. Thus, similar to other authors, we suggest that surveillance for the detection of SARS-CoV-2 in urban wild rodents, as sentinel animals, should be maintained.
publishDate 2024
dc.date.none.fl_str_mv 2024-02-06
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/221801
10.1590/S1678-9946202466008
url https://www.revistas.usp.br/rimtsp/article/view/221801
identifier_str_mv 10.1590/S1678-9946202466008
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/rimtsp/article/view/221801/202714
dc.rights.driver.fl_str_mv https://creativecommons.org/licenses/by-nc/4.0
info:eu-repo/semantics/openAccess
rights_invalid_str_mv https://creativecommons.org/licenses/by-nc/4.0
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
publisher.none.fl_str_mv Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo
dc.source.none.fl_str_mv Revista do Instituto de Medicina Tropical de São Paulo; Vol. 66 (2024); e08
Revista do Instituto de Medicina Tropical de São Paulo; v. 66 (2024); e08
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 66 (2024); e08
1678-9946
0036-4665
reponame:Revista do Instituto de Medicina Tropical de São Paulo
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