Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Revista do Instituto de Medicina Tropical de São Paulo |
Texto Completo: | https://www.revistas.usp.br/rimtsp/article/view/31086 |
Resumo: | An "in-house" RT-PCR method was developed that allows the simultaneous detection of the RNA of the Hepatitis C Virus (HCV) and an artificial RNA employed as an external control. Samples were analyzed in pools of 6-12 donations, each donation included in two pools, one horizontal and one vertical, permitting the immediate identification of a reactive donation, obviating the need for pool dismembering. The whole process took 6-8 hours per day and results were issued in parallel to serology. The method was shown to detect all six HCV genotypes and a sensitivity of 500 IU/mL was achieved (95% hit rate). Until July 2005, 139,678 donations were tested and 315 (0.23%) were found reactive for HCV-RNA. Except for five false-positives, all 310 presented the corresponding antibody as well, so the yield of NAT-only donations was zero, presenting a specificity of 99.83%. Detection of a window period donation, in the population studied, will probably demand testing of a larger number of donations. International experience is showing a rate of 1:200,000 - 1:500,000 of isolated HCV-RNA reactive donations. |
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Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results Triagem primária de doadores de sangue por teste de ácidos nucléicos: desenvolvimento de um método não-comercial e resultados Nucleic Acid TestingBlood DonorsRT-PCRTransfusional RiskHepatitis C VirusHCV An "in-house" RT-PCR method was developed that allows the simultaneous detection of the RNA of the Hepatitis C Virus (HCV) and an artificial RNA employed as an external control. Samples were analyzed in pools of 6-12 donations, each donation included in two pools, one horizontal and one vertical, permitting the immediate identification of a reactive donation, obviating the need for pool dismembering. The whole process took 6-8 hours per day and results were issued in parallel to serology. The method was shown to detect all six HCV genotypes and a sensitivity of 500 IU/mL was achieved (95% hit rate). Until July 2005, 139,678 donations were tested and 315 (0.23%) were found reactive for HCV-RNA. Except for five false-positives, all 310 presented the corresponding antibody as well, so the yield of NAT-only donations was zero, presenting a specificity of 99.83%. Detection of a window period donation, in the population studied, will probably demand testing of a larger number of donations. International experience is showing a rate of 1:200,000 - 1:500,000 of isolated HCV-RNA reactive donations. Desenvolveu-se uma metodologia própria ("in-house") baseada em RT-PCR, que permite detectar simultaneamente o RNA do vírus HCV e de um RNA artificial empregado como controle externo. As amostras são analisadas em pools de 6-12 doações, cada doação sendo incluída em dois pools diferentes, um horizontal e um vertical, permitindo a identificação imediata de uma doação reativa, sem a necessidade de desmembrar-se um pool reativo. O processo todo consumiu de 6-8 horas diárias e os resultados foram emitidos em paralelo à sorologia. O método detectou os seis genótipos de HCV, com um limite de sensibilidade de 500 UI/mL (95% hit rate). Até julho de 2005 haviam sido testadas 139.678 doações com a detecção de 315 (0,23%) doações reativas para HCV-RNA. Exceto cinco falso-positivas, todas estas doações também apresentavam o respectivo anticorpo, portanto não se detectou nenhuma doação em janela imunológica. A especificidade foi de 99,83%. A detecção de amostra em janela imunológica, nesta população de doadores, provavelmente demandará a análise de um número maior de doações, espelhando-se na experiência internacional que tem mostrado a detecção de amostras HCV-RNA isoladas em 1:200.000 - 1:500.000 doações. Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo2007-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/rimtsp/article/view/31086Revista do Instituto de Medicina Tropical de São Paulo; Vol. 49 No. 3 (2007); 177-185 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 49 Núm. 3 (2007); 177-185 Revista do Instituto de Medicina Tropical de São Paulo; v. 49 n. 3 (2007); 177-185 1678-99460036-4665reponame:Revista do Instituto de Medicina Tropical de São Pauloinstname:Instituto de Medicina Tropical (IMT)instacron:IMTenghttps://www.revistas.usp.br/rimtsp/article/view/31086/32970Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Pauloinfo:eu-repo/semantics/openAccessWendel, SilvanoLevi, José EduardoTakaoka, Deise TiheSilva, Isabela CristinaCastro, Juliana Polachini deTorezan-Filho, Mário A.Ghaname, JorgeGioachini, RomualdoBrandão, JoselitoDurigon, Edison Luis2012-07-07T19:01:51Zoai:revistas.usp.br:article/31086Revistahttp://www.revistas.usp.br/rimtsp/indexPUBhttps://www.revistas.usp.br/rimtsp/oai||revimtsp@usp.br1678-99460036-4665opendoar:2022-12-13T16:51:47.204248Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT)true |
dc.title.none.fl_str_mv |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results Triagem primária de doadores de sangue por teste de ácidos nucléicos: desenvolvimento de um método não-comercial e resultados |
title |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
spellingShingle |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results Wendel, Silvano Nucleic Acid Testing Blood Donors RT-PCR Transfusional Risk Hepatitis C Virus HCV |
title_short |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
title_full |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
title_fullStr |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
title_full_unstemmed |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
title_sort |
Primary screening of blood donors by nat testing for HCV-RNA: development of an "in-house" method and results |
author |
Wendel, Silvano |
author_facet |
Wendel, Silvano Levi, José Eduardo Takaoka, Deise Tihe Silva, Isabela Cristina Castro, Juliana Polachini de Torezan-Filho, Mário A. Ghaname, Jorge Gioachini, Romualdo Brandão, Joselito Durigon, Edison Luis |
author_role |
author |
author2 |
Levi, José Eduardo Takaoka, Deise Tihe Silva, Isabela Cristina Castro, Juliana Polachini de Torezan-Filho, Mário A. Ghaname, Jorge Gioachini, Romualdo Brandão, Joselito Durigon, Edison Luis |
author2_role |
author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Wendel, Silvano Levi, José Eduardo Takaoka, Deise Tihe Silva, Isabela Cristina Castro, Juliana Polachini de Torezan-Filho, Mário A. Ghaname, Jorge Gioachini, Romualdo Brandão, Joselito Durigon, Edison Luis |
dc.subject.por.fl_str_mv |
Nucleic Acid Testing Blood Donors RT-PCR Transfusional Risk Hepatitis C Virus HCV |
topic |
Nucleic Acid Testing Blood Donors RT-PCR Transfusional Risk Hepatitis C Virus HCV |
description |
An "in-house" RT-PCR method was developed that allows the simultaneous detection of the RNA of the Hepatitis C Virus (HCV) and an artificial RNA employed as an external control. Samples were analyzed in pools of 6-12 donations, each donation included in two pools, one horizontal and one vertical, permitting the immediate identification of a reactive donation, obviating the need for pool dismembering. The whole process took 6-8 hours per day and results were issued in parallel to serology. The method was shown to detect all six HCV genotypes and a sensitivity of 500 IU/mL was achieved (95% hit rate). Until July 2005, 139,678 donations were tested and 315 (0.23%) were found reactive for HCV-RNA. Except for five false-positives, all 310 presented the corresponding antibody as well, so the yield of NAT-only donations was zero, presenting a specificity of 99.83%. Detection of a window period donation, in the population studied, will probably demand testing of a larger number of donations. International experience is showing a rate of 1:200,000 - 1:500,000 of isolated HCV-RNA reactive donations. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-06-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/31086 |
url |
https://www.revistas.usp.br/rimtsp/article/view/31086 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://www.revistas.usp.br/rimtsp/article/view/31086/32970 |
dc.rights.driver.fl_str_mv |
Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Copyright (c) 2018 Revista do Instituto de Medicina Tropical de São Paulo |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
publisher.none.fl_str_mv |
Universidade de São Paulo. Instituto de Medicina Tropical de São Paulo |
dc.source.none.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo; Vol. 49 No. 3 (2007); 177-185 Revista do Instituto de Medicina Tropical de São Paulo; Vol. 49 Núm. 3 (2007); 177-185 Revista do Instituto de Medicina Tropical de São Paulo; v. 49 n. 3 (2007); 177-185 1678-9946 0036-4665 reponame:Revista do Instituto de Medicina Tropical de São Paulo instname:Instituto de Medicina Tropical (IMT) instacron:IMT |
instname_str |
Instituto de Medicina Tropical (IMT) |
instacron_str |
IMT |
institution |
IMT |
reponame_str |
Revista do Instituto de Medicina Tropical de São Paulo |
collection |
Revista do Instituto de Medicina Tropical de São Paulo |
repository.name.fl_str_mv |
Revista do Instituto de Medicina Tropical de São Paulo - Instituto de Medicina Tropical (IMT) |
repository.mail.fl_str_mv |
||revimtsp@usp.br |
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1798951646239129600 |