Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean

Detalhes bibliográficos
Autor(a) principal: Silveira, Cynthia Barbosa da
Data de Publicação: 2011
Outros Autores: Vieira, Ricardo Pilz, Cardoso, Alexander Machado, Paranhos, Rodolfo Pinheiro da Rocha, Albano, Rodolpho Mattos, Martins, Orlando Bonifácio
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INMETRO
Texto Completo: http://hdl.handle.net/10926/1700
Resumo: Background: Planktonic bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems, however, the taxa that make up these communities are poorly known. The aim of this study was to investigate bacterial communities in aquatic ecosystems at Ilha Grande, Rio de Janeiro, Brazil, a preserved insular environment of the Atlantic rain forest and how they correlate with a salinity gradient going from terrestrial aquatic habitats to the coastal Atlantic Ocean. Methodology/Principal Findings: We analyzed chemical and microbiological parameters of water samples and constructed 16S rRNA gene libraries of free living bacteria obtained at three marine (two coastal and one offshore) and three freshwater (water spring, river, and mangrove) environments. A total of 836 sequences were analyzed by MOTHUR, yielding 269 freshwater and 219 marine operational taxonomic units (OTUs) grouped at 97% stringency. Richness and diversity indexes indicated that freshwater environments were the most diverse, especially the water spring. The main bacterial group in freshwater environments was Betaproteobacteria (43.5%), whereas Cyanobacteria (30.5%), Alphaproteobacteria (25.5%), and Gammaproteobacteria (26.3%) dominated the marine ones. Venn diagram showed no overlap between marine and freshwater OTUs at 97% stringency. LIBSHUFF statistics and PCA analysis revealed marked differences between the freshwater and marine libraries suggesting the importance of salinity as a driver of community composition in this habitat. The phylogenetic analysis of marine and freshwater libraries showed that the differences in community composition are consistent. Conclusions/Significance: Our data supports the notion that a divergent evolutionary scenario is driving community composition in the studied habitats. This work also improves the comprehension of microbial community dynamics in tropical waters and how they are structured in relation to physicochemical parameters. Furthermore, this paper reveals for the first time the pristine bacterioplankton communities in a tropical island at the South Atlantic Ocean.
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spelling info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleInfluence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean20112012-06-22T12:37:56Z2012-06-22T12:37:56ZBackground: Planktonic bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems, however, the taxa that make up these communities are poorly known. The aim of this study was to investigate bacterial communities in aquatic ecosystems at Ilha Grande, Rio de Janeiro, Brazil, a preserved insular environment of the Atlantic rain forest and how they correlate with a salinity gradient going from terrestrial aquatic habitats to the coastal Atlantic Ocean. Methodology/Principal Findings: We analyzed chemical and microbiological parameters of water samples and constructed 16S rRNA gene libraries of free living bacteria obtained at three marine (two coastal and one offshore) and three freshwater (water spring, river, and mangrove) environments. A total of 836 sequences were analyzed by MOTHUR, yielding 269 freshwater and 219 marine operational taxonomic units (OTUs) grouped at 97% stringency. Richness and diversity indexes indicated that freshwater environments were the most diverse, especially the water spring. The main bacterial group in freshwater environments was Betaproteobacteria (43.5%), whereas Cyanobacteria (30.5%), Alphaproteobacteria (25.5%), and Gammaproteobacteria (26.3%) dominated the marine ones. Venn diagram showed no overlap between marine and freshwater OTUs at 97% stringency. LIBSHUFF statistics and PCA analysis revealed marked differences between the freshwater and marine libraries suggesting the importance of salinity as a driver of community composition in this habitat. The phylogenetic analysis of marine and freshwater libraries showed that the differences in community composition are consistent. Conclusions/Significance: Our data supports the notion that a divergent evolutionary scenario is driving community composition in the studied habitats. This work also improves the comprehension of microbial community dynamics in tropical waters and how they are structured in relation to physicochemical parameters. Furthermore, this paper reveals for the first time the pristine bacterioplankton communities in a tropical island at the South Atlantic Ocean.9 p. : il.Submitted by Lívia Oliveira (livia.oliveira2@hotmail.com) on 2012-06-05T16:47:59Z No. of bitstreams: 1 Plos One,v.6,n.3,p.e17789,2011.pdf: 517214 bytes, checksum: 6338e7497a8352203f3295d0920e12c0 (MD5)Approved for entry into archive by Regina Mello(mrmello@inmetro.gov.br) on 2012-06-20T15:29:40Z (GMT) No. of bitstreams: 1 Plos One,v.6,n.3,p.e17789,2011.pdf: 517214 bytes, checksum: 6338e7497a8352203f3295d0920e12c0 (MD5)Made available in DSpace on 2012-06-22T12:37:56Z (GMT). No. of bitstreams: 1 Plos One,v.6,n.3,p.e17789,2011.pdf: 517214 bytes, checksum: 6338e7497a8352203f3295d0920e12c0 (MD5) Previous issue date: 2011enghttp://hdl.handle.net/10926/1700DMD_hdl_10926/1700SILVEIRA, Cynthia B. et al. Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean. Plos One, v. 6, n. 3, 2011.Silveira, Cynthia Barbosa daVieira, Ricardo PilzCardoso, Alexander MachadoParanhos, Rodolfo Pinheiro da RochaAlbano, Rodolpho MattosMartins, Orlando Bonifácioinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional do INMETROinstname:Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO)instacron:INMETROSilveira_2011.pdfhttp://xrepo01s.inmetro.gov.br/bitstream/10926/1700/1/Silveira_2011.pdfapplication/pdf517214http://xrepo01s.inmetro.gov.br/bitstream/10926/1700/1/Silveira_2011.pdf6338e7497a8352203f3295d0920e12c0MD510926_1700_1Silveira_2011.pdf.txthttp://xrepo01s.inmetro.gov.br/bitstream/10926/1700/6/Silveira_2011.pdf.txttext/plain48297http://xrepo01s.inmetro.gov.br/bitstream/10926/1700/6/Silveira_2011.pdf.txtcc28078fc52f334fc7c259c9bbfc291eMD510926_1700_62024-06-10T15:24:53Zoai:xrepo01s.inmetro.gov.br:10926/1700Repositório de Publicaçõeshttp://repositorios.inmetro.gov.br/oai/requestopendoar:2012-10-29T14:12:25Repositório Institucional do INMETRO - Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO)false
dc.title.none.fl_str_mv Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
title Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
spellingShingle Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
Silveira, Cynthia Barbosa da
title_short Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
title_full Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
title_fullStr Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
title_full_unstemmed Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
title_sort Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean
author Silveira, Cynthia Barbosa da
author_facet Silveira, Cynthia Barbosa da
Vieira, Ricardo Pilz
Cardoso, Alexander Machado
Paranhos, Rodolfo Pinheiro da Rocha
Albano, Rodolpho Mattos
Martins, Orlando Bonifácio
author_role author
author2 Vieira, Ricardo Pilz
Cardoso, Alexander Machado
Paranhos, Rodolfo Pinheiro da Rocha
Albano, Rodolpho Mattos
Martins, Orlando Bonifácio
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Silveira, Cynthia Barbosa da
Vieira, Ricardo Pilz
Cardoso, Alexander Machado
Paranhos, Rodolfo Pinheiro da Rocha
Albano, Rodolpho Mattos
Martins, Orlando Bonifácio
description Background: Planktonic bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems, however, the taxa that make up these communities are poorly known. The aim of this study was to investigate bacterial communities in aquatic ecosystems at Ilha Grande, Rio de Janeiro, Brazil, a preserved insular environment of the Atlantic rain forest and how they correlate with a salinity gradient going from terrestrial aquatic habitats to the coastal Atlantic Ocean. Methodology/Principal Findings: We analyzed chemical and microbiological parameters of water samples and constructed 16S rRNA gene libraries of free living bacteria obtained at three marine (two coastal and one offshore) and three freshwater (water spring, river, and mangrove) environments. A total of 836 sequences were analyzed by MOTHUR, yielding 269 freshwater and 219 marine operational taxonomic units (OTUs) grouped at 97% stringency. Richness and diversity indexes indicated that freshwater environments were the most diverse, especially the water spring. The main bacterial group in freshwater environments was Betaproteobacteria (43.5%), whereas Cyanobacteria (30.5%), Alphaproteobacteria (25.5%), and Gammaproteobacteria (26.3%) dominated the marine ones. Venn diagram showed no overlap between marine and freshwater OTUs at 97% stringency. LIBSHUFF statistics and PCA analysis revealed marked differences between the freshwater and marine libraries suggesting the importance of salinity as a driver of community composition in this habitat. The phylogenetic analysis of marine and freshwater libraries showed that the differences in community composition are consistent. Conclusions/Significance: Our data supports the notion that a divergent evolutionary scenario is driving community composition in the studied habitats. This work also improves the comprehension of microbial community dynamics in tropical waters and how they are structured in relation to physicochemical parameters. Furthermore, this paper reveals for the first time the pristine bacterioplankton communities in a tropical island at the South Atlantic Ocean.
publishDate 2011
dc.date.issued.fl_str_mv 2011
dc.date.available.fl_str_mv 2012-06-22T12:37:56Z
dc.date.accessioned.fl_str_mv 2012-06-22T12:37:56Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10926/1700
DMD_hdl_10926/1700
dc.identifier.citation.fl_str_mv SILVEIRA, Cynthia B. et al. Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean. Plos One, v. 6, n. 3, 2011.
url http://hdl.handle.net/10926/1700
identifier_str_mv DMD_hdl_10926/1700
SILVEIRA, Cynthia B. et al. Influence of salinity on bacterioplankton communities from the brazilian rain forest to the coastal Atlantic Ocean. Plos One, v. 6, n. 3, 2011.
dc.language.iso.fl_str_mv eng
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instname:Instituto Nacional de Metrologia, Qualidade e Tecnologia (INMETRO)
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