Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)

Detalhes bibliográficos
Autor(a) principal: Banhos, Aureo
Data de Publicação: 2008
Outros Autores: Hrbek, Tomas, Gravena, Waleska, Sanaiotti, Tânia Margarete, Farias, Izeni P.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14961
Resumo: We report the characterization and optimization of 45 heterologous microsatellite loci, and the development of a new set of molecular sex markers for the conservation and management of the Neotropical harpy eagle (Harpia harpyja L. 1758). Of the 45 microsatellites tested, 24 were polymorphic, six monomorphic, 10 uncharacterizable due to multiple bands and five did not amplify. The observed gene diversity of the analyzed sample of H. harpyja was low and similar to that of other threatened Falconiformes. While a high proportion of the microsatellite markers were highly variable, individuals of H. harpyja could be differentiated by a joint analysis of just three (p = 2.79 × 10-4) or four markers (p = 2.89 × 10-4). Paternity could be rejected with 95.23% and 97.83% probabilities using the same three and four markers, respectively. The sex determination markers easily and consistently differentiated males from females even with highly degraded DNA extracted from naturally shed feathers. The markers reported in this study potentially provide an excellent set of molecular tools for the conservation and management of wild and captive H. harpyja and they may also prove useful for the enigmatic Neotropical crested eagle (Morphnus guianensis Daudin 1800). Copyright by the Brazilian Society of Genetics.
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spelling Banhos, AureoHrbek, TomasGravena, WaleskaSanaiotti, Tânia MargareteFarias, Izeni P.2020-05-07T13:59:09Z2020-05-07T13:59:09Z2008https://repositorio.inpa.gov.br/handle/1/1496110.1590/S1415-47572008000100025We report the characterization and optimization of 45 heterologous microsatellite loci, and the development of a new set of molecular sex markers for the conservation and management of the Neotropical harpy eagle (Harpia harpyja L. 1758). Of the 45 microsatellites tested, 24 were polymorphic, six monomorphic, 10 uncharacterizable due to multiple bands and five did not amplify. The observed gene diversity of the analyzed sample of H. harpyja was low and similar to that of other threatened Falconiformes. While a high proportion of the microsatellite markers were highly variable, individuals of H. harpyja could be differentiated by a joint analysis of just three (p = 2.79 × 10-4) or four markers (p = 2.89 × 10-4). Paternity could be rejected with 95.23% and 97.83% probabilities using the same three and four markers, respectively. The sex determination markers easily and consistently differentiated males from females even with highly degraded DNA extracted from naturally shed feathers. The markers reported in this study potentially provide an excellent set of molecular tools for the conservation and management of wild and captive H. harpyja and they may also prove useful for the enigmatic Neotropical crested eagle (Morphnus guianensis Daudin 1800). Copyright by the Brazilian Society of Genetics.Volume 31, Número 1, Pags. 146-154Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessGenomic DnaAnimals TissueConservation GeneticsControlled StudyDna DegradationDna ExtractionEagleFalconiformesFeatherFemaleGene AmplificationGene LocusPolymorphism, GeneticGenetic VariabilityGenomicsMaleMicrosatellite MarkerNonhumanNucleotide SequencePaternityProbabilitySex DeterminationSpecies ConservationsStatistical SignificanceWild SpeciesAccipitridaeFalconiformesHarpia HarpyjaMorphnus GuianensisRaptoresGenomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Biologyengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf114533https://repositorio.inpa.gov.br/bitstream/1/14961/1/artigo-inpa.pdf9bc782b984bcba9db0ab0d6ed5f6475bMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14961/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/149612020-07-14 10:29:59.195oai:repositorio:1/14961Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:29:59Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
title Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
spellingShingle Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
Banhos, Aureo
Genomic Dna
Animals Tissue
Conservation Genetics
Controlled Study
Dna Degradation
Dna Extraction
Eagle
Falconiformes
Feather
Female
Gene Amplification
Gene Locus
Polymorphism, Genetic
Genetic Variability
Genomics
Male
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Paternity
Probability
Sex Determination
Species Conservations
Statistical Significance
Wild Species
Accipitridae
Falconiformes
Harpia Harpyja
Morphnus Guianensis
Raptores
title_short Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
title_full Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
title_fullStr Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
title_full_unstemmed Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
title_sort Genomic resources for the conservation and management of the harpy eagle (Harpia harpyja, Falconiformes, Accipitridae)
author Banhos, Aureo
author_facet Banhos, Aureo
Hrbek, Tomas
Gravena, Waleska
Sanaiotti, Tânia Margarete
Farias, Izeni P.
author_role author
author2 Hrbek, Tomas
Gravena, Waleska
Sanaiotti, Tânia Margarete
Farias, Izeni P.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Banhos, Aureo
Hrbek, Tomas
Gravena, Waleska
Sanaiotti, Tânia Margarete
Farias, Izeni P.
dc.subject.eng.fl_str_mv Genomic Dna
Animals Tissue
Conservation Genetics
Controlled Study
Dna Degradation
Dna Extraction
Eagle
Falconiformes
Feather
Female
Gene Amplification
Gene Locus
Polymorphism, Genetic
Genetic Variability
Genomics
Male
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Paternity
Probability
Sex Determination
Species Conservations
Statistical Significance
Wild Species
Accipitridae
Falconiformes
Harpia Harpyja
Morphnus Guianensis
Raptores
topic Genomic Dna
Animals Tissue
Conservation Genetics
Controlled Study
Dna Degradation
Dna Extraction
Eagle
Falconiformes
Feather
Female
Gene Amplification
Gene Locus
Polymorphism, Genetic
Genetic Variability
Genomics
Male
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Paternity
Probability
Sex Determination
Species Conservations
Statistical Significance
Wild Species
Accipitridae
Falconiformes
Harpia Harpyja
Morphnus Guianensis
Raptores
description We report the characterization and optimization of 45 heterologous microsatellite loci, and the development of a new set of molecular sex markers for the conservation and management of the Neotropical harpy eagle (Harpia harpyja L. 1758). Of the 45 microsatellites tested, 24 were polymorphic, six monomorphic, 10 uncharacterizable due to multiple bands and five did not amplify. The observed gene diversity of the analyzed sample of H. harpyja was low and similar to that of other threatened Falconiformes. While a high proportion of the microsatellite markers were highly variable, individuals of H. harpyja could be differentiated by a joint analysis of just three (p = 2.79 × 10-4) or four markers (p = 2.89 × 10-4). Paternity could be rejected with 95.23% and 97.83% probabilities using the same three and four markers, respectively. The sex determination markers easily and consistently differentiated males from females even with highly degraded DNA extracted from naturally shed feathers. The markers reported in this study potentially provide an excellent set of molecular tools for the conservation and management of wild and captive H. harpyja and they may also prove useful for the enigmatic Neotropical crested eagle (Morphnus guianensis Daudin 1800). Copyright by the Brazilian Society of Genetics.
publishDate 2008
dc.date.issued.fl_str_mv 2008
dc.date.accessioned.fl_str_mv 2020-05-07T13:59:09Z
dc.date.available.fl_str_mv 2020-05-07T13:59:09Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14961
dc.identifier.doi.none.fl_str_mv 10.1590/S1415-47572008000100025
url https://repositorio.inpa.gov.br/handle/1/14961
identifier_str_mv 10.1590/S1415-47572008000100025
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 31, Número 1, Pags. 146-154
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Genetics and Molecular Biology
publisher.none.fl_str_mv Genetics and Molecular Biology
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
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reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
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