Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest

Detalhes bibliográficos
Autor(a) principal: Womack, Ann M.
Data de Publicação: 2015
Outros Autores: Artaxo, Paulo, Ishida, Francoise Yoko, Mueller, Rebecca C., Saleska, Scott Reid, Wiedemann, Kenia T., Bohannan, Brendan J.M., Green, Jessica L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14912
Resumo: Fungi are ubiquitous in the atmosphere and may play an important role in atmospheric processes. We investigated the composition and diversity of fungal communities over the Amazon rainforest canopy and compared these communities to fungal communities found in terrestrial environments. We characterized the total fungal community and the metabolically active portion of the community using high-throughput DNA and RNA sequencing and compared these data to predictions generated by a mass-balance model. We found that the total community was primarily comprised of fungi from the phylum Basidiomycota. In contrast, the active community was primarily composed of members of the phylum Ascomycota and included a high relative abundance of lichen fungi, which were not detected in the total community. The relative abundance of Basidiomycota and Ascomycota in the total and active communities was consistent with our model predictions, suggesting that this result was driven by the relative size and number of spores produced by these groups. When compared to other environments, fungal communities in the atmosphere were most similar to communities found in tropical soils and leaf surfaces. Our results demonstrate that there are significant differences in the composition of the total and active fungal communities in the atmosphere, and that lichen fungi, which have been shown to be efficient ice nucleators, may be abundant members of active atmospheric fungal communities over the forest canopy. © 2015 Author(s).
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spelling Womack, Ann M.Artaxo, PauloIshida, Francoise YokoMueller, Rebecca C.Saleska, Scott ReidWiedemann, Kenia T.Bohannan, Brendan J.M.Green, Jessica L.2020-05-07T13:47:22Z2020-05-07T13:47:22Z2015https://repositorio.inpa.gov.br/handle/1/1491210.5194/bg-12-6337-2015Fungi are ubiquitous in the atmosphere and may play an important role in atmospheric processes. We investigated the composition and diversity of fungal communities over the Amazon rainforest canopy and compared these communities to fungal communities found in terrestrial environments. We characterized the total fungal community and the metabolically active portion of the community using high-throughput DNA and RNA sequencing and compared these data to predictions generated by a mass-balance model. We found that the total community was primarily comprised of fungi from the phylum Basidiomycota. In contrast, the active community was primarily composed of members of the phylum Ascomycota and included a high relative abundance of lichen fungi, which were not detected in the total community. The relative abundance of Basidiomycota and Ascomycota in the total and active communities was consistent with our model predictions, suggesting that this result was driven by the relative size and number of spores produced by these groups. When compared to other environments, fungal communities in the atmosphere were most similar to communities found in tropical soils and leaf surfaces. Our results demonstrate that there are significant differences in the composition of the total and active fungal communities in the atmosphere, and that lichen fungi, which have been shown to be efficient ice nucleators, may be abundant members of active atmospheric fungal communities over the forest canopy. © 2015 Author(s).Volume 12, Número 21, Pags. 6337-6349Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessForest CanopyFungusLichenMolecular AnalysisRainforestRelative AbundanceSpecies DiversitySporeTropical SoilsAmazoniaAscomycotaBasidiomycotaFungiCharacterization of active and total fungal communities in the atmosphere over the Amazon rainforestinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBiogeosciencesengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf358237https://repositorio.inpa.gov.br/bitstream/1/14912/1/artigo-inpa.pdf93c61210df8b6bc4440b750c793cd286MD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14912/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/149122020-07-14 10:28:41.505oai:repositorio:1/14912Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:28:41Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
title Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
spellingShingle Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
Womack, Ann M.
Forest Canopy
Fungus
Lichen
Molecular Analysis
Rainforest
Relative Abundance
Species Diversity
Spore
Tropical Soils
Amazonia
Ascomycota
Basidiomycota
Fungi
title_short Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
title_full Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
title_fullStr Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
title_full_unstemmed Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
title_sort Characterization of active and total fungal communities in the atmosphere over the Amazon rainforest
author Womack, Ann M.
author_facet Womack, Ann M.
Artaxo, Paulo
Ishida, Francoise Yoko
Mueller, Rebecca C.
Saleska, Scott Reid
Wiedemann, Kenia T.
Bohannan, Brendan J.M.
Green, Jessica L.
author_role author
author2 Artaxo, Paulo
Ishida, Francoise Yoko
Mueller, Rebecca C.
Saleska, Scott Reid
Wiedemann, Kenia T.
Bohannan, Brendan J.M.
Green, Jessica L.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Womack, Ann M.
Artaxo, Paulo
Ishida, Francoise Yoko
Mueller, Rebecca C.
Saleska, Scott Reid
Wiedemann, Kenia T.
Bohannan, Brendan J.M.
Green, Jessica L.
dc.subject.eng.fl_str_mv Forest Canopy
Fungus
Lichen
Molecular Analysis
Rainforest
Relative Abundance
Species Diversity
Spore
Tropical Soils
Amazonia
Ascomycota
Basidiomycota
Fungi
topic Forest Canopy
Fungus
Lichen
Molecular Analysis
Rainforest
Relative Abundance
Species Diversity
Spore
Tropical Soils
Amazonia
Ascomycota
Basidiomycota
Fungi
description Fungi are ubiquitous in the atmosphere and may play an important role in atmospheric processes. We investigated the composition and diversity of fungal communities over the Amazon rainforest canopy and compared these communities to fungal communities found in terrestrial environments. We characterized the total fungal community and the metabolically active portion of the community using high-throughput DNA and RNA sequencing and compared these data to predictions generated by a mass-balance model. We found that the total community was primarily comprised of fungi from the phylum Basidiomycota. In contrast, the active community was primarily composed of members of the phylum Ascomycota and included a high relative abundance of lichen fungi, which were not detected in the total community. The relative abundance of Basidiomycota and Ascomycota in the total and active communities was consistent with our model predictions, suggesting that this result was driven by the relative size and number of spores produced by these groups. When compared to other environments, fungal communities in the atmosphere were most similar to communities found in tropical soils and leaf surfaces. Our results demonstrate that there are significant differences in the composition of the total and active fungal communities in the atmosphere, and that lichen fungi, which have been shown to be efficient ice nucleators, may be abundant members of active atmospheric fungal communities over the forest canopy. © 2015 Author(s).
publishDate 2015
dc.date.issued.fl_str_mv 2015
dc.date.accessioned.fl_str_mv 2020-05-07T13:47:22Z
dc.date.available.fl_str_mv 2020-05-07T13:47:22Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14912
dc.identifier.doi.none.fl_str_mv 10.5194/bg-12-6337-2015
url https://repositorio.inpa.gov.br/handle/1/14912
identifier_str_mv 10.5194/bg-12-6337-2015
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 12, Número 21, Pags. 6337-6349
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Biogeosciences
publisher.none.fl_str_mv Biogeosciences
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
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