Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA

Detalhes bibliográficos
Autor(a) principal: Borges-Moroni, R.
Data de Publicação: 2012
Outros Autores: Fraga, Elmary da Costa, Maia, Juracy de Freitas, Tadei, Wanderli Pedro, Santos, Joselita Maria M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/16132
Resumo: Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al.
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spelling Borges-Moroni, R.Fraga, Elmary da CostaMaia, Juracy de FreitasTadei, Wanderli PedroSantos, Joselita Maria M.2020-05-24T22:15:12Z2020-05-24T22:15:12Z2012https://repositorio.inpa.gov.br/handle/1/1613210.2174/1874315301205010006Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al.Volume 5, Número 1, Pags. 6-11Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessDna, MitochondrialAnophelesAnopheles BenarrochiAnopheles DarlingiAnopheles MarajoaraAnopheles MattogrossensisAnopheles OswaldoiAnopheles RangeliAnopheles TriannulatusCelliaControlled StudyDna PolymorphismGene MutationGenetic DistanceGenetic VariabilityGenusHaplotypeNonhumanNucleic Acid Base SubstitutionNyssorhychusPhylogenyPolymorphic LocusPriority JournalSpecies DifferenceSpecies IdentificationGenetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNAinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleOpen Tropical Medicine Journalengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf344627https://repositorio.inpa.gov.br/bitstream/1/16132/1/artigo-inpa.pdf33c7e78a37aef1801f7a1daa57d72db8MD511/161322020-05-25 10:21:30.498oai:repositorio:1/16132Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-05-25T14:21:30Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
title Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
spellingShingle Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
Borges-Moroni, R.
Dna, Mitochondrial
Anopheles
Anopheles Benarrochi
Anopheles Darlingi
Anopheles Marajoara
Anopheles Mattogrossensis
Anopheles Oswaldoi
Anopheles Rangeli
Anopheles Triannulatus
Cellia
Controlled Study
Dna Polymorphism
Gene Mutation
Genetic Distance
Genetic Variability
Genus
Haplotype
Nonhuman
Nucleic Acid Base Substitution
Nyssorhychus
Phylogeny
Polymorphic Locus
Priority Journal
Species Difference
Species Identification
title_short Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
title_full Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
title_fullStr Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
title_full_unstemmed Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
title_sort Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
author Borges-Moroni, R.
author_facet Borges-Moroni, R.
Fraga, Elmary da Costa
Maia, Juracy de Freitas
Tadei, Wanderli Pedro
Santos, Joselita Maria M.
author_role author
author2 Fraga, Elmary da Costa
Maia, Juracy de Freitas
Tadei, Wanderli Pedro
Santos, Joselita Maria M.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Borges-Moroni, R.
Fraga, Elmary da Costa
Maia, Juracy de Freitas
Tadei, Wanderli Pedro
Santos, Joselita Maria M.
dc.subject.eng.fl_str_mv Dna, Mitochondrial
Anopheles
Anopheles Benarrochi
Anopheles Darlingi
Anopheles Marajoara
Anopheles Mattogrossensis
Anopheles Oswaldoi
Anopheles Rangeli
Anopheles Triannulatus
Cellia
Controlled Study
Dna Polymorphism
Gene Mutation
Genetic Distance
Genetic Variability
Genus
Haplotype
Nonhuman
Nucleic Acid Base Substitution
Nyssorhychus
Phylogeny
Polymorphic Locus
Priority Journal
Species Difference
Species Identification
topic Dna, Mitochondrial
Anopheles
Anopheles Benarrochi
Anopheles Darlingi
Anopheles Marajoara
Anopheles Mattogrossensis
Anopheles Oswaldoi
Anopheles Rangeli
Anopheles Triannulatus
Cellia
Controlled Study
Dna Polymorphism
Gene Mutation
Genetic Distance
Genetic Variability
Genus
Haplotype
Nonhuman
Nucleic Acid Base Substitution
Nyssorhychus
Phylogeny
Polymorphic Locus
Priority Journal
Species Difference
Species Identification
description Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al.
publishDate 2012
dc.date.issued.fl_str_mv 2012
dc.date.accessioned.fl_str_mv 2020-05-24T22:15:12Z
dc.date.available.fl_str_mv 2020-05-24T22:15:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/16132
dc.identifier.doi.none.fl_str_mv 10.2174/1874315301205010006
url https://repositorio.inpa.gov.br/handle/1/16132
identifier_str_mv 10.2174/1874315301205010006
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 5, Número 1, Pags. 6-11
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Open Tropical Medicine Journal
publisher.none.fl_str_mv Open Tropical Medicine Journal
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institution INPA
reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
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