Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INPA |
Texto Completo: | https://repositorio.inpa.gov.br/handle/1/16132 |
Resumo: | Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al. |
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Borges-Moroni, R.Fraga, Elmary da CostaMaia, Juracy de FreitasTadei, Wanderli PedroSantos, Joselita Maria M.2020-05-24T22:15:12Z2020-05-24T22:15:12Z2012https://repositorio.inpa.gov.br/handle/1/1613210.2174/1874315301205010006Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al.Volume 5, Número 1, Pags. 6-11Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessDna, MitochondrialAnophelesAnopheles BenarrochiAnopheles DarlingiAnopheles MarajoaraAnopheles MattogrossensisAnopheles OswaldoiAnopheles RangeliAnopheles TriannulatusCelliaControlled StudyDna PolymorphismGene MutationGenetic DistanceGenetic VariabilityGenusHaplotypeNonhumanNucleic Acid Base SubstitutionNyssorhychusPhylogenyPolymorphic LocusPriority JournalSpecies DifferenceSpecies IdentificationGenetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNAinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleOpen Tropical Medicine Journalengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfartigo-inpa.pdfapplication/pdf344627https://repositorio.inpa.gov.br/bitstream/1/16132/1/artigo-inpa.pdf33c7e78a37aef1801f7a1daa57d72db8MD511/161322020-05-25 10:21:30.498oai:repositorio:1/16132Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-05-25T14:21:30Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false |
dc.title.en.fl_str_mv |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
title |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
spellingShingle |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA Borges-Moroni, R. Dna, Mitochondrial Anopheles Anopheles Benarrochi Anopheles Darlingi Anopheles Marajoara Anopheles Mattogrossensis Anopheles Oswaldoi Anopheles Rangeli Anopheles Triannulatus Cellia Controlled Study Dna Polymorphism Gene Mutation Genetic Distance Genetic Variability Genus Haplotype Nonhuman Nucleic Acid Base Substitution Nyssorhychus Phylogeny Polymorphic Locus Priority Journal Species Difference Species Identification |
title_short |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
title_full |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
title_fullStr |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
title_full_unstemmed |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
title_sort |
Genetic differentiation in species of Anopheles from the subgenera Nyssorhynchus based on mitochondrial DNA |
author |
Borges-Moroni, R. |
author_facet |
Borges-Moroni, R. Fraga, Elmary da Costa Maia, Juracy de Freitas Tadei, Wanderli Pedro Santos, Joselita Maria M. |
author_role |
author |
author2 |
Fraga, Elmary da Costa Maia, Juracy de Freitas Tadei, Wanderli Pedro Santos, Joselita Maria M. |
author2_role |
author author author author |
dc.contributor.author.fl_str_mv |
Borges-Moroni, R. Fraga, Elmary da Costa Maia, Juracy de Freitas Tadei, Wanderli Pedro Santos, Joselita Maria M. |
dc.subject.eng.fl_str_mv |
Dna, Mitochondrial Anopheles Anopheles Benarrochi Anopheles Darlingi Anopheles Marajoara Anopheles Mattogrossensis Anopheles Oswaldoi Anopheles Rangeli Anopheles Triannulatus Cellia Controlled Study Dna Polymorphism Gene Mutation Genetic Distance Genetic Variability Genus Haplotype Nonhuman Nucleic Acid Base Substitution Nyssorhychus Phylogeny Polymorphic Locus Priority Journal Species Difference Species Identification |
topic |
Dna, Mitochondrial Anopheles Anopheles Benarrochi Anopheles Darlingi Anopheles Marajoara Anopheles Mattogrossensis Anopheles Oswaldoi Anopheles Rangeli Anopheles Triannulatus Cellia Controlled Study Dna Polymorphism Gene Mutation Genetic Distance Genetic Variability Genus Haplotype Nonhuman Nucleic Acid Base Substitution Nyssorhychus Phylogeny Polymorphic Locus Priority Journal Species Difference Species Identification |
description |
Our group analyzed species of Anopheles of the subgenus Nyssorhynchus (An. darlingi, An. marajoara, An. oswaldoi, An. benarrochi, An. triannulatus and An. rangeli) and a single species of the subgenus Anopheles (An. mattogrossensis), originating in the Amazon, based on the mitochondrial DNA control region. The fragment had 381 pb and the nucleotide composition in A+T ranged from 85.8 to 89.5%. DNA polymorphism analysis of the species detected 15 haplotypes, with the presence of 81 polymorphic loci, 95 mutations, haplotypic divergence of 0.879, nucleotide diversity of 0.06507, nucleotide differences pair the pair mean of 23.1749, and the observed and expected variances of 113.840 and 8.33, respectively. The genetic distance among the Anopheles species varied from 0.06 to 1.37%. An. oswaldoi and An. rangeli were the most similar, with nucleotide divergence of 0.17%. The An. benarrochi populations of Ji-Paraná and Bolivia showed nucleotide divergence of 0.06%. An. darlingi, An. marajoara and An. triannulatus presented nucleotide divergences of 0.35% between An. triannulatus and An. darlingiand of 0.47% between An. darlingi and An. marajoara. This data showed ample interspecific nucleotide variation, though with low nucleotide divergence. The cladogram separated the species of the subgenus Nyssorhynchus and those of the subgenera Cellia and Anopheles, with 98% bootstrap. The region control data did not show strong phylogenetic support, as indicated by the transition/transversion mean rate (0.4643), which is necessary for increasing fragment size and using other more conservative genes for greater inference concerning the phylogeny of the Anopheles species of the subgenus Nyssorhynchus. © Borges-Moroni et al. |
publishDate |
2012 |
dc.date.issued.fl_str_mv |
2012 |
dc.date.accessioned.fl_str_mv |
2020-05-24T22:15:12Z |
dc.date.available.fl_str_mv |
2020-05-24T22:15:12Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://repositorio.inpa.gov.br/handle/1/16132 |
dc.identifier.doi.none.fl_str_mv |
10.2174/1874315301205010006 |
url |
https://repositorio.inpa.gov.br/handle/1/16132 |
identifier_str_mv |
10.2174/1874315301205010006 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Volume 5, Número 1, Pags. 6-11 |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Open Tropical Medicine Journal |
publisher.none.fl_str_mv |
Open Tropical Medicine Journal |
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reponame:Repositório Institucional do INPA instname:Instituto Nacional de Pesquisas da Amazônia (INPA) instacron:INPA |
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Repositório Institucional do INPA |
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https://repositorio.inpa.gov.br/bitstream/1/16132/1/artigo-inpa.pdf |
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