Genetic diversity of bromeliaceae species from the atlantic forest

Detalhes bibliográficos
Autor(a) principal: Sheu, Yumi
Data de Publicação: 2017
Outros Autores: Cunha-Machado, Antônio Saulo, Gontijo, Andreia Barcelos Passos Lima, Favoreto, Fernanda Campanharo, Soares, Taís Cristina Bastos, Miranda, F. D.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/15016
Resumo: The Bromeliaceae family includes a range of species used for many purposes, including ornamental use and use as food, medicine, feed, and fiber. The state of Espírito Santo, Brazil is a center of diversity for this family in the Atlantic Forest. We evaluated the genetic diversity of five populations of the Bromeliaceae family, including specimens of the genera Aechmea, Billbergia (subfamily Bromelioideae), and Pitcairnia (subfamily Pitcairnioidea), all found in the Atlantic Forest and distributed in the state of Espírito Santo. The number of alleles per locus in populations ranged from two to six and the fixation index (F), estimated for some simple sequence repeats in bromeliad populations, was less than zero in all populations. All markers in the Pitcairnia flammea population were in Hardy-Weinberg equilibrium (P < 0.05). Moreover, significant deviations from Hardy-Weinberg equilibrium were observed at some loci in populations of the five bromeliad species. In most cases, this can be attributed to the presence of inbreeding or the Wahlund effect. The genetic diversity indices of five species showed greater allelic richness in P. flammea (3.55). Therefore, we provide useful information for the characterization of genetic diversity in natural populations of Aechmea ramosa, Aechmea nudicaulis, Billbergia horrid, Billbergia euphemia, and P. flammea in Atlantic Forest remnants in the south of Espírito Santo state. © 2017 The Authors.
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spelling Sheu, YumiCunha-Machado, Antônio SauloGontijo, Andreia Barcelos Passos LimaFavoreto, Fernanda CampanharoSoares, Taís Cristina BastosMiranda, F. D.2020-05-07T14:00:36Z2020-05-07T14:00:36Z2017https://repositorio.inpa.gov.br/handle/1/1501610.4238/gmr16029636The Bromeliaceae family includes a range of species used for many purposes, including ornamental use and use as food, medicine, feed, and fiber. The state of Espírito Santo, Brazil is a center of diversity for this family in the Atlantic Forest. We evaluated the genetic diversity of five populations of the Bromeliaceae family, including specimens of the genera Aechmea, Billbergia (subfamily Bromelioideae), and Pitcairnia (subfamily Pitcairnioidea), all found in the Atlantic Forest and distributed in the state of Espírito Santo. The number of alleles per locus in populations ranged from two to six and the fixation index (F), estimated for some simple sequence repeats in bromeliad populations, was less than zero in all populations. All markers in the Pitcairnia flammea population were in Hardy-Weinberg equilibrium (P < 0.05). Moreover, significant deviations from Hardy-Weinberg equilibrium were observed at some loci in populations of the five bromeliad species. In most cases, this can be attributed to the presence of inbreeding or the Wahlund effect. The genetic diversity indices of five species showed greater allelic richness in P. flammea (3.55). Therefore, we provide useful information for the characterization of genetic diversity in natural populations of Aechmea ramosa, Aechmea nudicaulis, Billbergia horrid, Billbergia euphemia, and P. flammea in Atlantic Forest remnants in the south of Espírito Santo state. © 2017 The Authors.Volume 16, Número 2Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlleleBromeliaceaeFamilyForestGenetic VariabilityHumanHuman ExperimentInbreedingNatural PopulationNonhumanSimple Sequence RepeatSpeciesBiodiversityBrasilBromeliaceaeClassificationGene LocusPolymorphism, GeneticGeneticsAllelesBiodiversityBrasilBromeliaceaeForestsGenetic LociInbreedingPolymorphism, GeneticGenetic diversity of bromeliaceae species from the atlantic forestinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf321418https://repositorio.inpa.gov.br/bitstream/1/15016/1/artigo-inpa.pdf72304d0677484525f24548a6cad03fafMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/15016/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/150162020-07-14 10:30:53.001oai:repositorio:1/15016Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:30:53Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Genetic diversity of bromeliaceae species from the atlantic forest
title Genetic diversity of bromeliaceae species from the atlantic forest
spellingShingle Genetic diversity of bromeliaceae species from the atlantic forest
Sheu, Yumi
Allele
Bromeliaceae
Family
Forest
Genetic Variability
Human
Human Experiment
Inbreeding
Natural Population
Nonhuman
Simple Sequence Repeat
Species
Biodiversity
Brasil
Bromeliaceae
Classification
Gene Locus
Polymorphism, Genetic
Genetics
Alleles
Biodiversity
Brasil
Bromeliaceae
Forests
Genetic Loci
Inbreeding
Polymorphism, Genetic
title_short Genetic diversity of bromeliaceae species from the atlantic forest
title_full Genetic diversity of bromeliaceae species from the atlantic forest
title_fullStr Genetic diversity of bromeliaceae species from the atlantic forest
title_full_unstemmed Genetic diversity of bromeliaceae species from the atlantic forest
title_sort Genetic diversity of bromeliaceae species from the atlantic forest
author Sheu, Yumi
author_facet Sheu, Yumi
Cunha-Machado, Antônio Saulo
Gontijo, Andreia Barcelos Passos Lima
Favoreto, Fernanda Campanharo
Soares, Taís Cristina Bastos
Miranda, F. D.
author_role author
author2 Cunha-Machado, Antônio Saulo
Gontijo, Andreia Barcelos Passos Lima
Favoreto, Fernanda Campanharo
Soares, Taís Cristina Bastos
Miranda, F. D.
author2_role author
author
author
author
author
dc.contributor.author.fl_str_mv Sheu, Yumi
Cunha-Machado, Antônio Saulo
Gontijo, Andreia Barcelos Passos Lima
Favoreto, Fernanda Campanharo
Soares, Taís Cristina Bastos
Miranda, F. D.
dc.subject.eng.fl_str_mv Allele
Bromeliaceae
Family
Forest
Genetic Variability
Human
Human Experiment
Inbreeding
Natural Population
Nonhuman
Simple Sequence Repeat
Species
Biodiversity
Brasil
Bromeliaceae
Classification
Gene Locus
Polymorphism, Genetic
Genetics
Alleles
Biodiversity
Brasil
Bromeliaceae
Forests
Genetic Loci
Inbreeding
Polymorphism, Genetic
topic Allele
Bromeliaceae
Family
Forest
Genetic Variability
Human
Human Experiment
Inbreeding
Natural Population
Nonhuman
Simple Sequence Repeat
Species
Biodiversity
Brasil
Bromeliaceae
Classification
Gene Locus
Polymorphism, Genetic
Genetics
Alleles
Biodiversity
Brasil
Bromeliaceae
Forests
Genetic Loci
Inbreeding
Polymorphism, Genetic
description The Bromeliaceae family includes a range of species used for many purposes, including ornamental use and use as food, medicine, feed, and fiber. The state of Espírito Santo, Brazil is a center of diversity for this family in the Atlantic Forest. We evaluated the genetic diversity of five populations of the Bromeliaceae family, including specimens of the genera Aechmea, Billbergia (subfamily Bromelioideae), and Pitcairnia (subfamily Pitcairnioidea), all found in the Atlantic Forest and distributed in the state of Espírito Santo. The number of alleles per locus in populations ranged from two to six and the fixation index (F), estimated for some simple sequence repeats in bromeliad populations, was less than zero in all populations. All markers in the Pitcairnia flammea population were in Hardy-Weinberg equilibrium (P < 0.05). Moreover, significant deviations from Hardy-Weinberg equilibrium were observed at some loci in populations of the five bromeliad species. In most cases, this can be attributed to the presence of inbreeding or the Wahlund effect. The genetic diversity indices of five species showed greater allelic richness in P. flammea (3.55). Therefore, we provide useful information for the characterization of genetic diversity in natural populations of Aechmea ramosa, Aechmea nudicaulis, Billbergia horrid, Billbergia euphemia, and P. flammea in Atlantic Forest remnants in the south of Espírito Santo state. © 2017 The Authors.
publishDate 2017
dc.date.issued.fl_str_mv 2017
dc.date.accessioned.fl_str_mv 2020-05-07T14:00:36Z
dc.date.available.fl_str_mv 2020-05-07T14:00:36Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/15016
dc.identifier.doi.none.fl_str_mv 10.4238/gmr16029636
url https://repositorio.inpa.gov.br/handle/1/15016
identifier_str_mv 10.4238/gmr16029636
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 16, Número 2
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Genetics and Molecular Research
publisher.none.fl_str_mv Genetics and Molecular Research
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reponame_str Repositório Institucional do INPA
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