Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach

Detalhes bibliográficos
Autor(a) principal: Bruschi, Daniel Pacheco
Data de Publicação: 2013
Outros Autores: Busin, Carmen Sílvia, Felipe, Toledo, Luís, Vasconcellos, Gilda A., Strüssmann, Christine, Weber, Luiz Norberto, Lima, Albertina Pimental, Lima, Jucivaldo Dias, Pimentel, Shirlei Maria Recco
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/16044
Resumo: Background: The taxonomic and phylogenetic relationships of the genus Phyllomedusa have been amply discussed. The marked morphological similarities among some species hamper the reliable identification of specimens and may often lead to their incorrect taxonomic classification on the sole basis of morphological traits. Phenotypic variation was observed among populations assigned to either P. azurea or P. hypochondrialis. In order to evaluate whether the variation observed in populations assigned to P. hypochondrialis is related to that in genotypes, a cytogenetic analysis was combined with phylogenetic inferences based on mitochondrial and nuclear sequences.Results: The inter- and intra-population variation in the external morphology observed among the specimens analyzed in the present study do not reflect the phylogenetic relationships among populations. A monophyletic clade was recovered, grouping all the specimens identified as P. hypochondrialis and specimens assigned P. azurea from Minas Gerais state. This clade is characterized by conserved chromosomal morphology and a common C-banding pattern. Extensive variation in the nucleolar organizing region (NOR) was observed among populations, with four distinct NOR positions being recognized in the karyotypes. Intra-population polymorphism of the additional rDNA clusters observed in specimens from Barreiras, Bahia state, also highlights the marked genomic instability of the rDNA in the genome of this group. Based on the topology obtained in the phylogenetic analyses, the re-evaluation of the taxonomic status of the specimens from the southernmost population known in Brazil is recommended.Conclusions: The results of this study support the need for a thorough revision of the phenotypic features used to discriminate P. azurea and P. hypochondrialis. The phylogenetic data presented here also contribute to an extension of the geographic range of P. hypochondrialis, which is known to occur in the Amazon basin and neighboring areas of the Cerrado savanna, where it may be sympatric with P. azurea, within contact zones. The misidentification of specimens may have led to inconsistencies in the original definition of the geographic range of P. azurea. The variability observed in the NOR of P. hypochondrialis reinforces the conclusion that these sites represent hotspots of rearrangement. Intraspecific variation in the location of these sites is the result of constant rearrangements that are not detected by classical cytogenetic methods or are traits of an ancestral, polymorphic karyotype, which would not be phylogenetically informative for this group. © 2013 Bruschi et al.; licensee BioMed Central Ltd.
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spelling Bruschi, Daniel PachecoBusin, Carmen SílviaFelipe, Toledo, LuísVasconcellos, Gilda A.Strüssmann, ChristineWeber, Luiz NorbertoLima, Albertina PimentalLima, Jucivaldo DiasPimentel, Shirlei Maria Recco2020-05-22T18:37:53Z2020-05-22T18:37:53Z2013https://repositorio.inpa.gov.br/handle/1/1604410.1186/1471-2156-14-70Background: The taxonomic and phylogenetic relationships of the genus Phyllomedusa have been amply discussed. The marked morphological similarities among some species hamper the reliable identification of specimens and may often lead to their incorrect taxonomic classification on the sole basis of morphological traits. Phenotypic variation was observed among populations assigned to either P. azurea or P. hypochondrialis. In order to evaluate whether the variation observed in populations assigned to P. hypochondrialis is related to that in genotypes, a cytogenetic analysis was combined with phylogenetic inferences based on mitochondrial and nuclear sequences.Results: The inter- and intra-population variation in the external morphology observed among the specimens analyzed in the present study do not reflect the phylogenetic relationships among populations. A monophyletic clade was recovered, grouping all the specimens identified as P. hypochondrialis and specimens assigned P. azurea from Minas Gerais state. This clade is characterized by conserved chromosomal morphology and a common C-banding pattern. Extensive variation in the nucleolar organizing region (NOR) was observed among populations, with four distinct NOR positions being recognized in the karyotypes. Intra-population polymorphism of the additional rDNA clusters observed in specimens from Barreiras, Bahia state, also highlights the marked genomic instability of the rDNA in the genome of this group. Based on the topology obtained in the phylogenetic analyses, the re-evaluation of the taxonomic status of the specimens from the southernmost population known in Brazil is recommended.Conclusions: The results of this study support the need for a thorough revision of the phenotypic features used to discriminate P. azurea and P. hypochondrialis. The phylogenetic data presented here also contribute to an extension of the geographic range of P. hypochondrialis, which is known to occur in the Amazon basin and neighboring areas of the Cerrado savanna, where it may be sympatric with P. azurea, within contact zones. The misidentification of specimens may have led to inconsistencies in the original definition of the geographic range of P. azurea. The variability observed in the NOR of P. hypochondrialis reinforces the conclusion that these sites represent hotspots of rearrangement. Intraspecific variation in the location of these sites is the result of constant rearrangements that are not detected by classical cytogenetic methods or are traits of an ancestral, polymorphic karyotype, which would not be phylogenetically informative for this group. © 2013 Bruschi et al.; licensee BioMed Central Ltd.Volume 14, Pags. 1-14Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessRibosome DnaAnimals ExperimentBrasilC BandingChromosome AnalysisChromosome NorCladisticsConservation GeneticsControlled StudyCytogeneticsGene ClusterGenetic VariabilityGenomeGenomic InstabilityGenotypeIntraspecific VariationKaryotypeMaleMorphological TraitNonhumanPhyllomedusaPhyllomedusa HypochondrialisPhylogenyGenetics, PopulationPolymorphism, Single NucleotideTaxonomic IdentificationTaxonomyAnimalsAnuraChromosomeClassificationGeneticsKaryotypingPhylogenyAnuraHylidaePhyllomedusaPhyllomedusa HypochondrialisPhyllomedusinaeAnimalAnuraChromosomesKaryotypingNucleolus Organizer RegionPhylogenyEvaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approachinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Geneticsengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa7.pdfartigo-inpa7.pdfapplication/pdf1453601https://repositorio.inpa.gov.br/bitstream/1/16044/1/artigo-inpa7.pdfb1379df697b3bf2654872e93fb3d63d2MD511/160442020-07-14 11:28:09.504oai:repositorio:1/16044Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T15:28:09Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
title Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
spellingShingle Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
Bruschi, Daniel Pacheco
Ribosome Dna
Animals Experiment
Brasil
C Banding
Chromosome Analysis
Chromosome Nor
Cladistics
Conservation Genetics
Controlled Study
Cytogenetics
Gene Cluster
Genetic Variability
Genome
Genomic Instability
Genotype
Intraspecific Variation
Karyotype
Male
Morphological Trait
Nonhuman
Phyllomedusa
Phyllomedusa Hypochondrialis
Phylogeny
Genetics, Population
Polymorphism, Single Nucleotide
Taxonomic Identification
Taxonomy
Animals
Anura
Chromosome
Classification
Genetics
Karyotyping
Phylogeny
Anura
Hylidae
Phyllomedusa
Phyllomedusa Hypochondrialis
Phyllomedusinae
Animal
Anura
Chromosomes
Karyotyping
Nucleolus Organizer Region
Phylogeny
title_short Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
title_full Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
title_fullStr Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
title_full_unstemmed Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
title_sort Evaluation of the taxonomic status of populations assigned to Phyllomedusa hypochondrialis (Anura, Hylidae, Phyllomedusinae) based on molecular, chromosomal, and morphological approach
author Bruschi, Daniel Pacheco
author_facet Bruschi, Daniel Pacheco
Busin, Carmen Sílvia
Felipe, Toledo, Luís
Vasconcellos, Gilda A.
Strüssmann, Christine
Weber, Luiz Norberto
Lima, Albertina Pimental
Lima, Jucivaldo Dias
Pimentel, Shirlei Maria Recco
author_role author
author2 Busin, Carmen Sílvia
Felipe, Toledo, Luís
Vasconcellos, Gilda A.
Strüssmann, Christine
Weber, Luiz Norberto
Lima, Albertina Pimental
Lima, Jucivaldo Dias
Pimentel, Shirlei Maria Recco
author2_role author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Bruschi, Daniel Pacheco
Busin, Carmen Sílvia
Felipe, Toledo, Luís
Vasconcellos, Gilda A.
Strüssmann, Christine
Weber, Luiz Norberto
Lima, Albertina Pimental
Lima, Jucivaldo Dias
Pimentel, Shirlei Maria Recco
dc.subject.eng.fl_str_mv Ribosome Dna
Animals Experiment
Brasil
C Banding
Chromosome Analysis
Chromosome Nor
Cladistics
Conservation Genetics
Controlled Study
Cytogenetics
Gene Cluster
Genetic Variability
Genome
Genomic Instability
Genotype
Intraspecific Variation
Karyotype
Male
Morphological Trait
Nonhuman
Phyllomedusa
Phyllomedusa Hypochondrialis
Phylogeny
Genetics, Population
Polymorphism, Single Nucleotide
Taxonomic Identification
Taxonomy
Animals
Anura
Chromosome
Classification
Genetics
Karyotyping
Phylogeny
Anura
Hylidae
Phyllomedusa
Phyllomedusa Hypochondrialis
Phyllomedusinae
Animal
Anura
Chromosomes
Karyotyping
Nucleolus Organizer Region
Phylogeny
topic Ribosome Dna
Animals Experiment
Brasil
C Banding
Chromosome Analysis
Chromosome Nor
Cladistics
Conservation Genetics
Controlled Study
Cytogenetics
Gene Cluster
Genetic Variability
Genome
Genomic Instability
Genotype
Intraspecific Variation
Karyotype
Male
Morphological Trait
Nonhuman
Phyllomedusa
Phyllomedusa Hypochondrialis
Phylogeny
Genetics, Population
Polymorphism, Single Nucleotide
Taxonomic Identification
Taxonomy
Animals
Anura
Chromosome
Classification
Genetics
Karyotyping
Phylogeny
Anura
Hylidae
Phyllomedusa
Phyllomedusa Hypochondrialis
Phyllomedusinae
Animal
Anura
Chromosomes
Karyotyping
Nucleolus Organizer Region
Phylogeny
description Background: The taxonomic and phylogenetic relationships of the genus Phyllomedusa have been amply discussed. The marked morphological similarities among some species hamper the reliable identification of specimens and may often lead to their incorrect taxonomic classification on the sole basis of morphological traits. Phenotypic variation was observed among populations assigned to either P. azurea or P. hypochondrialis. In order to evaluate whether the variation observed in populations assigned to P. hypochondrialis is related to that in genotypes, a cytogenetic analysis was combined with phylogenetic inferences based on mitochondrial and nuclear sequences.Results: The inter- and intra-population variation in the external morphology observed among the specimens analyzed in the present study do not reflect the phylogenetic relationships among populations. A monophyletic clade was recovered, grouping all the specimens identified as P. hypochondrialis and specimens assigned P. azurea from Minas Gerais state. This clade is characterized by conserved chromosomal morphology and a common C-banding pattern. Extensive variation in the nucleolar organizing region (NOR) was observed among populations, with four distinct NOR positions being recognized in the karyotypes. Intra-population polymorphism of the additional rDNA clusters observed in specimens from Barreiras, Bahia state, also highlights the marked genomic instability of the rDNA in the genome of this group. Based on the topology obtained in the phylogenetic analyses, the re-evaluation of the taxonomic status of the specimens from the southernmost population known in Brazil is recommended.Conclusions: The results of this study support the need for a thorough revision of the phenotypic features used to discriminate P. azurea and P. hypochondrialis. The phylogenetic data presented here also contribute to an extension of the geographic range of P. hypochondrialis, which is known to occur in the Amazon basin and neighboring areas of the Cerrado savanna, where it may be sympatric with P. azurea, within contact zones. The misidentification of specimens may have led to inconsistencies in the original definition of the geographic range of P. azurea. The variability observed in the NOR of P. hypochondrialis reinforces the conclusion that these sites represent hotspots of rearrangement. Intraspecific variation in the location of these sites is the result of constant rearrangements that are not detected by classical cytogenetic methods or are traits of an ancestral, polymorphic karyotype, which would not be phylogenetically informative for this group. © 2013 Bruschi et al.; licensee BioMed Central Ltd.
publishDate 2013
dc.date.issued.fl_str_mv 2013
dc.date.accessioned.fl_str_mv 2020-05-22T18:37:53Z
dc.date.available.fl_str_mv 2020-05-22T18:37:53Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/16044
dc.identifier.doi.none.fl_str_mv 10.1186/1471-2156-14-70
url https://repositorio.inpa.gov.br/handle/1/16044
identifier_str_mv 10.1186/1471-2156-14-70
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 14, Pags. 1-14
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv BMC Genetics
publisher.none.fl_str_mv BMC Genetics
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
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