The status of the human gene catalogue
Autor(a) principal: | |
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Data de Publicação: | 2023 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , |
Idioma: | eng |
Título da fonte: | Biblioteca Digital de Teses e Dissertações do INSPER |
Texto Completo: | https://repositorio.insper.edu.br/handle/11224/6666 |
Resumo: | Scientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings. |
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The status of the human gene catalogueScientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings.Springer Nature2024-05-21T17:28:03Z2024-05-21T17:28:03Z2023Digitalp. 41–47application/pdfapplication/pdf1476-46870028-0836https://repositorio.insper.edu.br/handle/11224/666610.1038/s41586-023-06490-xCarbonell-Sala, SilviaDe La Vega, Francisco M.Faial, TiagoFrankish, AdamGingeras, ThomasGuigo, RodericHarrow, Jennifer L.Hatzigeorgiou, Artemis G.Johnson, RoryMurphy, Terence D.Pertea, MihaelaPruitt, Kim D.Pujar, ShashikantTakahashi, HazukiUlitsky, IgorVarabyou, AlesWells, Christine A.Yandell, MarkCarninci, PieroSalzberg, Steven L.PAULO DE PAIVA ROSA AMARALCarbonell-Sala, SilviaDe La Vega, Francisco M.Faial, TiagoFrankish, AdamGingeras, ThomasGuigo, RodericHarrow, Jennifer L.Hatzigeorgiou, Artemis G.Johnson, RoryMurphy, Terence D.Pertea, MihaelaPruitt, Kim D.Pujar, ShashikantTakahashi, HazukiUlitsky, IgorVarabyou, AlesWells, Christine A.Yandell, MarkCarninci, PieroSalzberg, Steven L.info:eu-repo/semantics/publishedVersionengreponame:Biblioteca Digital de Teses e Dissertações do INSPERinstname:Instituição de Ensino Superior e de Pesquisa (INSPER)instacron:INSPERinfo:eu-repo/semantics/openAccess2024-10-05T03:00:24Zoai:repositorio.insper.edu.br:11224/6666Biblioteca Digital de Teses e Dissertaçõeshttps://www.insper.edu.br/biblioteca-telles/PRIhttps://repositorio.insper.edu.br/oai/requestbiblioteca@insper.edu.br ||opendoar:2024-10-05T03:00:24Biblioteca Digital de Teses e Dissertações do INSPER - Instituição de Ensino Superior e de Pesquisa (INSPER)false |
dc.title.none.fl_str_mv |
The status of the human gene catalogue |
title |
The status of the human gene catalogue |
spellingShingle |
The status of the human gene catalogue Carbonell-Sala, Silvia |
title_short |
The status of the human gene catalogue |
title_full |
The status of the human gene catalogue |
title_fullStr |
The status of the human gene catalogue |
title_full_unstemmed |
The status of the human gene catalogue |
title_sort |
The status of the human gene catalogue |
author |
Carbonell-Sala, Silvia |
author_facet |
Carbonell-Sala, Silvia De La Vega, Francisco M. Faial, Tiago Frankish, Adam Gingeras, Thomas Guigo, Roderic Harrow, Jennifer L. Hatzigeorgiou, Artemis G. Johnson, Rory Murphy, Terence D. Pertea, Mihaela Pruitt, Kim D. Pujar, Shashikant Takahashi, Hazuki Ulitsky, Igor Varabyou, Ales Wells, Christine A. Yandell, Mark Carninci, Piero Salzberg, Steven L. PAULO DE PAIVA ROSA AMARAL |
author_role |
author |
author2 |
De La Vega, Francisco M. Faial, Tiago Frankish, Adam Gingeras, Thomas Guigo, Roderic Harrow, Jennifer L. Hatzigeorgiou, Artemis G. Johnson, Rory Murphy, Terence D. Pertea, Mihaela Pruitt, Kim D. Pujar, Shashikant Takahashi, Hazuki Ulitsky, Igor Varabyou, Ales Wells, Christine A. Yandell, Mark Carninci, Piero Salzberg, Steven L. PAULO DE PAIVA ROSA AMARAL |
author2_role |
author author author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Carbonell-Sala, Silvia De La Vega, Francisco M. Faial, Tiago Frankish, Adam Gingeras, Thomas Guigo, Roderic Harrow, Jennifer L. Hatzigeorgiou, Artemis G. Johnson, Rory Murphy, Terence D. Pertea, Mihaela Pruitt, Kim D. Pujar, Shashikant Takahashi, Hazuki Ulitsky, Igor Varabyou, Ales Wells, Christine A. Yandell, Mark Carninci, Piero Salzberg, Steven L. PAULO DE PAIVA ROSA AMARAL Carbonell-Sala, Silvia De La Vega, Francisco M. Faial, Tiago Frankish, Adam Gingeras, Thomas Guigo, Roderic Harrow, Jennifer L. Hatzigeorgiou, Artemis G. Johnson, Rory Murphy, Terence D. Pertea, Mihaela Pruitt, Kim D. Pujar, Shashikant Takahashi, Hazuki Ulitsky, Igor Varabyou, Ales Wells, Christine A. Yandell, Mark Carninci, Piero Salzberg, Steven L. |
description |
Scientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings. |
publishDate |
2023 |
dc.date.none.fl_str_mv |
2023 2024-05-21T17:28:03Z 2024-05-21T17:28:03Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
1476-4687 0028-0836 https://repositorio.insper.edu.br/handle/11224/6666 10.1038/s41586-023-06490-x |
identifier_str_mv |
1476-4687 0028-0836 10.1038/s41586-023-06490-x |
url |
https://repositorio.insper.edu.br/handle/11224/6666 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
Digital p. 41–47 application/pdf application/pdf |
dc.publisher.none.fl_str_mv |
Springer Nature |
publisher.none.fl_str_mv |
Springer Nature |
dc.source.none.fl_str_mv |
reponame:Biblioteca Digital de Teses e Dissertações do INSPER instname:Instituição de Ensino Superior e de Pesquisa (INSPER) instacron:INSPER |
instname_str |
Instituição de Ensino Superior e de Pesquisa (INSPER) |
instacron_str |
INSPER |
institution |
INSPER |
reponame_str |
Biblioteca Digital de Teses e Dissertações do INSPER |
collection |
Biblioteca Digital de Teses e Dissertações do INSPER |
repository.name.fl_str_mv |
Biblioteca Digital de Teses e Dissertações do INSPER - Instituição de Ensino Superior e de Pesquisa (INSPER) |
repository.mail.fl_str_mv |
biblioteca@insper.edu.br || |
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