The status of the human gene catalogue

Detalhes bibliográficos
Autor(a) principal: Carbonell-Sala, Silvia
Data de Publicação: 2023
Outros Autores: De La Vega, Francisco M., Faial, Tiago, Frankish, Adam, Gingeras, Thomas, Guigo, Roderic, Harrow, Jennifer L., Hatzigeorgiou, Artemis G., Johnson, Rory, Murphy, Terence D., Pertea, Mihaela, Pruitt, Kim D., Pujar, Shashikant, Takahashi, Hazuki, Ulitsky, Igor, Varabyou, Ales, Wells, Christine A., Yandell, Mark, Carninci, Piero, Salzberg, Steven L., PAULO DE PAIVA ROSA AMARAL
Idioma: eng
Título da fonte: Biblioteca Digital de Teses e Dissertações do INSPER
Texto Completo: https://repositorio.insper.edu.br/handle/11224/6666
Resumo: Scientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings.
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spelling The status of the human gene catalogueScientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings.Springer Nature2024-05-21T17:28:03Z2024-05-21T17:28:03Z2023Digitalp. 41–47application/pdfapplication/pdf1476-46870028-0836https://repositorio.insper.edu.br/handle/11224/666610.1038/s41586-023-06490-xCarbonell-Sala, SilviaDe La Vega, Francisco M.Faial, TiagoFrankish, AdamGingeras, ThomasGuigo, RodericHarrow, Jennifer L.Hatzigeorgiou, Artemis G.Johnson, RoryMurphy, Terence D.Pertea, MihaelaPruitt, Kim D.Pujar, ShashikantTakahashi, HazukiUlitsky, IgorVarabyou, AlesWells, Christine A.Yandell, MarkCarninci, PieroSalzberg, Steven L.PAULO DE PAIVA ROSA AMARALCarbonell-Sala, SilviaDe La Vega, Francisco M.Faial, TiagoFrankish, AdamGingeras, ThomasGuigo, RodericHarrow, Jennifer L.Hatzigeorgiou, Artemis G.Johnson, RoryMurphy, Terence D.Pertea, MihaelaPruitt, Kim D.Pujar, ShashikantTakahashi, HazukiUlitsky, IgorVarabyou, AlesWells, Christine A.Yandell, MarkCarninci, PieroSalzberg, Steven L.info:eu-repo/semantics/publishedVersionengreponame:Biblioteca Digital de Teses e Dissertações do INSPERinstname:Instituição de Ensino Superior e de Pesquisa (INSPER)instacron:INSPERinfo:eu-repo/semantics/openAccess2024-10-05T03:00:24Zoai:repositorio.insper.edu.br:11224/6666Biblioteca Digital de Teses e Dissertaçõeshttps://www.insper.edu.br/biblioteca-telles/PRIhttps://repositorio.insper.edu.br/oai/requestbiblioteca@insper.edu.br ||opendoar:2024-10-05T03:00:24Biblioteca Digital de Teses e Dissertações do INSPER - Instituição de Ensino Superior e de Pesquisa (INSPER)false
dc.title.none.fl_str_mv The status of the human gene catalogue
title The status of the human gene catalogue
spellingShingle The status of the human gene catalogue
Carbonell-Sala, Silvia
title_short The status of the human gene catalogue
title_full The status of the human gene catalogue
title_fullStr The status of the human gene catalogue
title_full_unstemmed The status of the human gene catalogue
title_sort The status of the human gene catalogue
author Carbonell-Sala, Silvia
author_facet Carbonell-Sala, Silvia
De La Vega, Francisco M.
Faial, Tiago
Frankish, Adam
Gingeras, Thomas
Guigo, Roderic
Harrow, Jennifer L.
Hatzigeorgiou, Artemis G.
Johnson, Rory
Murphy, Terence D.
Pertea, Mihaela
Pruitt, Kim D.
Pujar, Shashikant
Takahashi, Hazuki
Ulitsky, Igor
Varabyou, Ales
Wells, Christine A.
Yandell, Mark
Carninci, Piero
Salzberg, Steven L.
PAULO DE PAIVA ROSA AMARAL
author_role author
author2 De La Vega, Francisco M.
Faial, Tiago
Frankish, Adam
Gingeras, Thomas
Guigo, Roderic
Harrow, Jennifer L.
Hatzigeorgiou, Artemis G.
Johnson, Rory
Murphy, Terence D.
Pertea, Mihaela
Pruitt, Kim D.
Pujar, Shashikant
Takahashi, Hazuki
Ulitsky, Igor
Varabyou, Ales
Wells, Christine A.
Yandell, Mark
Carninci, Piero
Salzberg, Steven L.
PAULO DE PAIVA ROSA AMARAL
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Carbonell-Sala, Silvia
De La Vega, Francisco M.
Faial, Tiago
Frankish, Adam
Gingeras, Thomas
Guigo, Roderic
Harrow, Jennifer L.
Hatzigeorgiou, Artemis G.
Johnson, Rory
Murphy, Terence D.
Pertea, Mihaela
Pruitt, Kim D.
Pujar, Shashikant
Takahashi, Hazuki
Ulitsky, Igor
Varabyou, Ales
Wells, Christine A.
Yandell, Mark
Carninci, Piero
Salzberg, Steven L.
PAULO DE PAIVA ROSA AMARAL
Carbonell-Sala, Silvia
De La Vega, Francisco M.
Faial, Tiago
Frankish, Adam
Gingeras, Thomas
Guigo, Roderic
Harrow, Jennifer L.
Hatzigeorgiou, Artemis G.
Johnson, Rory
Murphy, Terence D.
Pertea, Mihaela
Pruitt, Kim D.
Pujar, Shashikant
Takahashi, Hazuki
Ulitsky, Igor
Varabyou, Ales
Wells, Christine A.
Yandell, Mark
Carninci, Piero
Salzberg, Steven L.
description Scientists have been trying to identify every gene in the human genome since the initial draft was published in 2001. In the years since, much progress has been made in identifying protein-coding genes, currently estimated to number fewer than 20,000, with an ever-expanding number of distinct protein-coding isoforms. Here we review the status of the human gene catalogue and the efforts to complete it in recent years. Beside the ongoing annotation of protein-coding genes, their isoforms and pseudogenes, the invention of high-throughput RNA sequencing and other technological breakthroughs have led to a rapid growth in the number of reported non-coding RNA genes. For most of these non-coding RNAs, the functional relevance is currently unclear; we look at recent advances that offer paths forward to identifying their functions and towards eventually completing the human gene catalogue. Finally, we examine the need for a universal annotation standard that includes all medically significant genes and maintains their relationships with different reference genomes for the use of the human gene catalogue in clinical settings.
publishDate 2023
dc.date.none.fl_str_mv 2023
2024-05-21T17:28:03Z
2024-05-21T17:28:03Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv 1476-4687
0028-0836
https://repositorio.insper.edu.br/handle/11224/6666
10.1038/s41586-023-06490-x
identifier_str_mv 1476-4687
0028-0836
10.1038/s41586-023-06490-x
url https://repositorio.insper.edu.br/handle/11224/6666
dc.language.iso.fl_str_mv eng
language eng
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dc.format.none.fl_str_mv Digital
p. 41–47
application/pdf
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dc.publisher.none.fl_str_mv Springer Nature
publisher.none.fl_str_mv Springer Nature
dc.source.none.fl_str_mv reponame:Biblioteca Digital de Teses e Dissertações do INSPER
instname:Instituição de Ensino Superior e de Pesquisa (INSPER)
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institution INSPER
reponame_str Biblioteca Digital de Teses e Dissertações do INSPER
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