Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil

Detalhes bibliográficos
Autor(a) principal: Costa,César S.B.
Data de Publicação: 2019
Outros Autores: Kadereit,Gudrun, Freitas,Gabriela Peres Moraes de
Tipo de documento: Artigo
Idioma: por
Título da fonte: Rodriguésia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602019000100237
Resumo: Abstract Molecular phylogenetic analyses based on ETS, ITS and atpB - rbcL spacer sequences assessed the phylogenetic status of the southern Brazil sea asparagus species of the genus Salicornia (Salicornioideae, Amaranthaceae). Accessions of Patos Lagoon estuary (32° S) were obtained from wild plants and two pure line lineages, selected from contrasting prostrate (BTH1) and decumbent (BTH2) ecomorphotypes found locally. Patos Lagoon wild plants, BTH1 and BTH2 f4 progenies showed 100% identical sequences for the atpB - rbcL and ITS spacers, only two mutations for ETS. Comparison of the sequences of these three markers with GenBank records confirmed the identity of Brazilian accessions as Salicornia neei . Maximum-likelihood phylogenetic analysis of ETS sequences indicated that the southern Brazilian accessions of Salicornia certainly are not close to any of the Salicornia ambigua accessions in GenBank, which are restricted to the northern hemisphere, nor are they related to any Salicornia fruticosa/Salicornia perennis clade accessions, which are also restricted to Eurasia. All above cited species have been wrongly applied to the southern Brazil sea asparagus.
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spelling Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazilsequências de DNASalicornioideaeSarcocorniahalófitasmarismas Abstract Molecular phylogenetic analyses based on ETS, ITS and atpB - rbcL spacer sequences assessed the phylogenetic status of the southern Brazil sea asparagus species of the genus Salicornia (Salicornioideae, Amaranthaceae). Accessions of Patos Lagoon estuary (32° S) were obtained from wild plants and two pure line lineages, selected from contrasting prostrate (BTH1) and decumbent (BTH2) ecomorphotypes found locally. Patos Lagoon wild plants, BTH1 and BTH2 f4 progenies showed 100% identical sequences for the atpB - rbcL and ITS spacers, only two mutations for ETS. Comparison of the sequences of these three markers with GenBank records confirmed the identity of Brazilian accessions as Salicornia neei . Maximum-likelihood phylogenetic analysis of ETS sequences indicated that the southern Brazilian accessions of Salicornia certainly are not close to any of the Salicornia ambigua accessions in GenBank, which are restricted to the northern hemisphere, nor are they related to any Salicornia fruticosa/Salicornia perennis clade accessions, which are also restricted to Eurasia. All above cited species have been wrongly applied to the southern Brazil sea asparagus.Instituto de Pesquisas Jardim Botânico do Rio de Janeiro2019-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602019000100237Rodriguésia v.70 2019reponame:Rodriguésia (Online)instname:Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)instacron:JBRJ10.1590/2175-7860201970039info:eu-repo/semantics/openAccessCosta,César S.B.Kadereit,GudrunFreitas,Gabriela Peres Moraes depor2019-08-05T00:00:00Zoai:scielo:S2175-78602019000100237Revistahttp://rodriguesia.jbrj.gov.br/https://old.scielo.br/oai/scielo-oai.phprodriguesia@jbrj.gov.br2175-78600370-6583opendoar:2019-08-05T00:00Rodriguésia (Online) - Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)false
dc.title.none.fl_str_mv Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
title Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
spellingShingle Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
Costa,César S.B.
sequências de DNA
Salicornioideae
Sarcocornia
halófitas
marismas
title_short Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
title_full Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
title_fullStr Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
title_full_unstemmed Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
title_sort Molecular markers indicate the phylogenetic identity of southern Brazilian sea asparagus: first record of Salicornia neei in Brazil
author Costa,César S.B.
author_facet Costa,César S.B.
Kadereit,Gudrun
Freitas,Gabriela Peres Moraes de
author_role author
author2 Kadereit,Gudrun
Freitas,Gabriela Peres Moraes de
author2_role author
author
dc.contributor.author.fl_str_mv Costa,César S.B.
Kadereit,Gudrun
Freitas,Gabriela Peres Moraes de
dc.subject.por.fl_str_mv sequências de DNA
Salicornioideae
Sarcocornia
halófitas
marismas
topic sequências de DNA
Salicornioideae
Sarcocornia
halófitas
marismas
description Abstract Molecular phylogenetic analyses based on ETS, ITS and atpB - rbcL spacer sequences assessed the phylogenetic status of the southern Brazil sea asparagus species of the genus Salicornia (Salicornioideae, Amaranthaceae). Accessions of Patos Lagoon estuary (32° S) were obtained from wild plants and two pure line lineages, selected from contrasting prostrate (BTH1) and decumbent (BTH2) ecomorphotypes found locally. Patos Lagoon wild plants, BTH1 and BTH2 f4 progenies showed 100% identical sequences for the atpB - rbcL and ITS spacers, only two mutations for ETS. Comparison of the sequences of these three markers with GenBank records confirmed the identity of Brazilian accessions as Salicornia neei . Maximum-likelihood phylogenetic analysis of ETS sequences indicated that the southern Brazilian accessions of Salicornia certainly are not close to any of the Salicornia ambigua accessions in GenBank, which are restricted to the northern hemisphere, nor are they related to any Salicornia fruticosa/Salicornia perennis clade accessions, which are also restricted to Eurasia. All above cited species have been wrongly applied to the southern Brazil sea asparagus.
publishDate 2019
dc.date.none.fl_str_mv 2019-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602019000100237
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602019000100237
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv 10.1590/2175-7860201970039
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
publisher.none.fl_str_mv Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
dc.source.none.fl_str_mv Rodriguésia v.70 2019
reponame:Rodriguésia (Online)
instname:Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
instacron:JBRJ
instname_str Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
instacron_str JBRJ
institution JBRJ
reponame_str Rodriguésia (Online)
collection Rodriguésia (Online)
repository.name.fl_str_mv Rodriguésia (Online) - Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
repository.mail.fl_str_mv rodriguesia@jbrj.gov.br
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