A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)

Detalhes bibliográficos
Autor(a) principal: Aguilera,Patricia Mabel
Data de Publicação: 2021
Outros Autores: Debat,Humberto Julio, Seijo,José Guillermo, Grabiele,Mauro
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Rodriguésia (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602021000100252
Resumo: Abstract Capsicum pubescens is a cultivated hot chili pepper, consumed in Latin American cuisine as a distinctive ingredient, and popularly known as “locoto” or “rocoto”. This taxon is also an outstanding source of resistance to biotic and abiotic stresses as well as other valuable fruit traits for breeding of the worldwidely cultivated C. annuum and related species. In this study, the chromosome complement of C. pubescens cv. “locoto” (2n = 24) was deeply characterized through a sequential combination of conventional and molecular cytogenetics approaches comprising: Ag-NOR staining, heterochromatic fluorescent C-DAPI, DAPI/AMD-CMA/DA bandings, fluorescence in situ hybridization (FISH) of Capsicum-derived probes of the 5S and 18S-25S rRNA genes and different regions of spacers of the ribosomal unit, as well as telomeric probe. The markers identified were systematically combined with morphological karyotype parameters - number, size, centromeres, satellites - to produce a physical map which allowed the identification of several landmarks in each individual chromosome. The reference chromosomal map of C. pubescens here presented is the most comprehensively developed in Capsicum so far. It is envisioned that this chromosomal map will serve as a reference framework for the upcoming sequencing projects and as starting point to assist future genetic mapping of important agronomic traits.
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spelling A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)Ag-NORfluorescent bandingsheterochromatinlocotorDNA FISHAbstract Capsicum pubescens is a cultivated hot chili pepper, consumed in Latin American cuisine as a distinctive ingredient, and popularly known as “locoto” or “rocoto”. This taxon is also an outstanding source of resistance to biotic and abiotic stresses as well as other valuable fruit traits for breeding of the worldwidely cultivated C. annuum and related species. In this study, the chromosome complement of C. pubescens cv. “locoto” (2n = 24) was deeply characterized through a sequential combination of conventional and molecular cytogenetics approaches comprising: Ag-NOR staining, heterochromatic fluorescent C-DAPI, DAPI/AMD-CMA/DA bandings, fluorescence in situ hybridization (FISH) of Capsicum-derived probes of the 5S and 18S-25S rRNA genes and different regions of spacers of the ribosomal unit, as well as telomeric probe. The markers identified were systematically combined with morphological karyotype parameters - number, size, centromeres, satellites - to produce a physical map which allowed the identification of several landmarks in each individual chromosome. The reference chromosomal map of C. pubescens here presented is the most comprehensively developed in Capsicum so far. It is envisioned that this chromosomal map will serve as a reference framework for the upcoming sequencing projects and as starting point to assist future genetic mapping of important agronomic traits.Instituto de Pesquisas Jardim Botânico do Rio de Janeiro2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602021000100252Rodriguésia v.72 2021reponame:Rodriguésia (Online)instname:Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)instacron:JBRJ10.1590/2175-7860202172062info:eu-repo/semantics/openAccessAguilera,Patricia MabelDebat,Humberto JulioSeijo,José GuillermoGrabiele,Mauroeng2021-09-17T00:00:00Zoai:scielo:S2175-78602021000100252Revistahttp://rodriguesia.jbrj.gov.br/https://old.scielo.br/oai/scielo-oai.phprodriguesia@jbrj.gov.br2175-78600370-6583opendoar:2021-09-17T00:00Rodriguésia (Online) - Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)false
dc.title.none.fl_str_mv A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
title A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
spellingShingle A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
Aguilera,Patricia Mabel
Ag-NOR
fluorescent bandings
heterochromatin
locoto
rDNA FISH
title_short A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
title_full A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
title_fullStr A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
title_full_unstemmed A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
title_sort A reference chromosomal map of the hot chili pepper Capsicum pubescens cv. “locoto” (Solanaceae)
author Aguilera,Patricia Mabel
author_facet Aguilera,Patricia Mabel
Debat,Humberto Julio
Seijo,José Guillermo
Grabiele,Mauro
author_role author
author2 Debat,Humberto Julio
Seijo,José Guillermo
Grabiele,Mauro
author2_role author
author
author
dc.contributor.author.fl_str_mv Aguilera,Patricia Mabel
Debat,Humberto Julio
Seijo,José Guillermo
Grabiele,Mauro
dc.subject.por.fl_str_mv Ag-NOR
fluorescent bandings
heterochromatin
locoto
rDNA FISH
topic Ag-NOR
fluorescent bandings
heterochromatin
locoto
rDNA FISH
description Abstract Capsicum pubescens is a cultivated hot chili pepper, consumed in Latin American cuisine as a distinctive ingredient, and popularly known as “locoto” or “rocoto”. This taxon is also an outstanding source of resistance to biotic and abiotic stresses as well as other valuable fruit traits for breeding of the worldwidely cultivated C. annuum and related species. In this study, the chromosome complement of C. pubescens cv. “locoto” (2n = 24) was deeply characterized through a sequential combination of conventional and molecular cytogenetics approaches comprising: Ag-NOR staining, heterochromatic fluorescent C-DAPI, DAPI/AMD-CMA/DA bandings, fluorescence in situ hybridization (FISH) of Capsicum-derived probes of the 5S and 18S-25S rRNA genes and different regions of spacers of the ribosomal unit, as well as telomeric probe. The markers identified were systematically combined with morphological karyotype parameters - number, size, centromeres, satellites - to produce a physical map which allowed the identification of several landmarks in each individual chromosome. The reference chromosomal map of C. pubescens here presented is the most comprehensively developed in Capsicum so far. It is envisioned that this chromosomal map will serve as a reference framework for the upcoming sequencing projects and as starting point to assist future genetic mapping of important agronomic traits.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602021000100252
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S2175-78602021000100252
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/2175-7860202172062
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
publisher.none.fl_str_mv Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
dc.source.none.fl_str_mv Rodriguésia v.72 2021
reponame:Rodriguésia (Online)
instname:Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
instacron:JBRJ
instname_str Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
instacron_str JBRJ
institution JBRJ
reponame_str Rodriguésia (Online)
collection Rodriguésia (Online)
repository.name.fl_str_mv Rodriguésia (Online) - Instituto de Pesquisas Jardim Botânico do Rio de Janeiro (JBRJ)
repository.mail.fl_str_mv rodriguesia@jbrj.gov.br
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