The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation

Detalhes bibliográficos
Autor(a) principal: Costa, Maria do Carmo
Data de Publicação: 2006
Outros Autores: Magalhães, Paula, Guimarães, Laura, Maciel, P., Sequeiros, Jorge, Sousa, Alda
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: https://hdl.handle.net/1822/5176
Resumo: Huntington disease (HD) is caused by an expansion of a CAG repeat. This repeat is a dynamic mutation that tends to undergo intergenerational instability. We report the analysis of the CAG repeat in a large population sample (2,000 chromosomes) covering all regions of Portugal, and a haplotype study of (CAG)n and (CCG)n repeats in 140 HD Portuguese families. Intermediate class 2 alleles represented 3.0% of the population; and two expanded alleles (36 and 40 repeats, 0.11%) were found. There was no evidence for geographical clustering of the intermediate or expanded alleles. The Portuguese families showed three different HD founder haplotypes associated with 7-, 9- or 10-CCG repeats, suggesting the possibility of different origins for theHDmutation among this population. The haplotype carrying the 7-CCG repeat was the most frequent, both in normal and in expanded alleles. In general, we propose that three mechanisms, occurring at different times,may lead to the evolution from normal CAGs to full expansion: first, a mutation bias towards larger alleles; then, a stepwise process that could explain the CAGdistributions observed in themore recent haplotypes; and, finally, a pool of intermediate (class 2) alleles more prone to give rise to expanded HD alleles.
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spelling The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutationTriplet repeat disordersCAG repeatEvolutionHD founder haplotypesCAG repeat evolutionScience & TechnologyHuntington disease (HD) is caused by an expansion of a CAG repeat. This repeat is a dynamic mutation that tends to undergo intergenerational instability. We report the analysis of the CAG repeat in a large population sample (2,000 chromosomes) covering all regions of Portugal, and a haplotype study of (CAG)n and (CCG)n repeats in 140 HD Portuguese families. Intermediate class 2 alleles represented 3.0% of the population; and two expanded alleles (36 and 40 repeats, 0.11%) were found. There was no evidence for geographical clustering of the intermediate or expanded alleles. The Portuguese families showed three different HD founder haplotypes associated with 7-, 9- or 10-CCG repeats, suggesting the possibility of different origins for theHDmutation among this population. The haplotype carrying the 7-CCG repeat was the most frequent, both in normal and in expanded alleles. In general, we propose that three mechanisms, occurring at different times,may lead to the evolution from normal CAGs to full expansion: first, a mutation bias towards larger alleles; then, a stepwise process that could explain the CAGdistributions observed in themore recent haplotypes; and, finally, a pool of intermediate (class 2) alleles more prone to give rise to expanded HD alleles.Instituto de Genética Médica Jacinto Magalhães.Fundação para a Ciência e a Tecnologia (FCT) - SFRH/BD/9759/2003.Springer VerlagUniversidade do MinhoCosta, Maria do CarmoMagalhães, PaulaGuimarães, LauraMaciel, P.Sequeiros, JorgeSousa, Alda20062006-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttps://hdl.handle.net/1822/5176engCosta, M.d.C., Magalhães, P., Guimarães, L. et al. The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation. J Hum Genet 51, 189–195 (2006). https://doi.org/10.1007/s10038-005-0343-81434-51611435-232X10.1007/s10038-005-0343-816372132https://www.nature.com/articles/jhg200629info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:24:46Zoai:repositorium.sdum.uminho.pt:1822/5176Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:18:52.087051Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
title The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
spellingShingle The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
Costa, Maria do Carmo
Triplet repeat disorders
CAG repeat
Evolution
HD founder haplotypes
CAG repeat evolution
Science & Technology
title_short The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
title_full The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
title_fullStr The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
title_full_unstemmed The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
title_sort The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation
author Costa, Maria do Carmo
author_facet Costa, Maria do Carmo
Magalhães, Paula
Guimarães, Laura
Maciel, P.
Sequeiros, Jorge
Sousa, Alda
author_role author
author2 Magalhães, Paula
Guimarães, Laura
Maciel, P.
Sequeiros, Jorge
Sousa, Alda
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Costa, Maria do Carmo
Magalhães, Paula
Guimarães, Laura
Maciel, P.
Sequeiros, Jorge
Sousa, Alda
dc.subject.por.fl_str_mv Triplet repeat disorders
CAG repeat
Evolution
HD founder haplotypes
CAG repeat evolution
Science & Technology
topic Triplet repeat disorders
CAG repeat
Evolution
HD founder haplotypes
CAG repeat evolution
Science & Technology
description Huntington disease (HD) is caused by an expansion of a CAG repeat. This repeat is a dynamic mutation that tends to undergo intergenerational instability. We report the analysis of the CAG repeat in a large population sample (2,000 chromosomes) covering all regions of Portugal, and a haplotype study of (CAG)n and (CCG)n repeats in 140 HD Portuguese families. Intermediate class 2 alleles represented 3.0% of the population; and two expanded alleles (36 and 40 repeats, 0.11%) were found. There was no evidence for geographical clustering of the intermediate or expanded alleles. The Portuguese families showed three different HD founder haplotypes associated with 7-, 9- or 10-CCG repeats, suggesting the possibility of different origins for theHDmutation among this population. The haplotype carrying the 7-CCG repeat was the most frequent, both in normal and in expanded alleles. In general, we propose that three mechanisms, occurring at different times,may lead to the evolution from normal CAGs to full expansion: first, a mutation bias towards larger alleles; then, a stepwise process that could explain the CAGdistributions observed in themore recent haplotypes; and, finally, a pool of intermediate (class 2) alleles more prone to give rise to expanded HD alleles.
publishDate 2006
dc.date.none.fl_str_mv 2006
2006-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://hdl.handle.net/1822/5176
url https://hdl.handle.net/1822/5176
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Costa, M.d.C., Magalhães, P., Guimarães, L. et al. The CAG repeat at the Huntington disease gene in the Portuguese population: insights into its dynamics and to the origin of the mutation. J Hum Genet 51, 189–195 (2006). https://doi.org/10.1007/s10038-005-0343-8
1434-5161
1435-232X
10.1007/s10038-005-0343-8
16372132
https://www.nature.com/articles/jhg200629
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Springer Verlag
publisher.none.fl_str_mv Springer Verlag
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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