A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom

Detalhes bibliográficos
Autor(a) principal: Duarte, Bernardo
Data de Publicação: 2021
Outros Autores: Gameiro, Carla, Utkin, Andrei Borissovitch, Matos, Ana Rita, Caçador, Isabel, Fonseca, Vanessa, Cabrita, Maria Teresa
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10451/48920
Resumo: The increasing uncontrolled development of human activities and consequent increase in the production and release into the marine realm of potentially harmful substances highlights the need to develop efficient and high-throughput screening (HTS) tools. Bio-optical tools, such as laser-induced fluorescence (LIF) and pulse amplitude modulated (PAM) fluorometry, emerge as efficient non-invasive techniques for toxicophenomic evaluation in ecotoxicological trials. Both techniques generate large datasets that can be applied in multivariate analysis to evaluate canonical classification efficiency of the exposure types and levels to which photosynthetic organisms, such as diatoms, are subjected to. In the present work, marine diatom cultures were exposed to two trace elements known to have physiological roles and different toxicity ranges (Zn and Cu), and to two other trace elements without known metabolic functions and very different toxicological profiles (Cr and Hg). All the tested approaches were able to disentangle the control groups from the test groups. Moreover, the application of LIF raw-data showed that this technique had the higher classification efficiency, providing very good separation of the different doses applied of each trace element tested. Additionally, PAM chlorophyll fast induction kinetics raw data also produced good classification efficiencies and provided data that can be useful for interpreting the physiological shifts induced by trace element exposure. In sum, LIF and PAM techniques appear as completely non-invasive HTS techniques that, when applied together, produce a correct toxicophenomic classification and disentangle the physiological effects behind the observed phenomic changes. Therefore, they are worth to be included in future ecotoxicological assessment test protocols.
id RCAP_0339af7947e6496269d227b022652e25
oai_identifier_str oai:repositorio.ul.pt:10451/48920
network_acronym_str RCAP
network_name_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository_id_str 7160
spelling A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatomTrace elementsChlorophyll fluorescenceEcotoxicologyHigh-throughput screeningThe increasing uncontrolled development of human activities and consequent increase in the production and release into the marine realm of potentially harmful substances highlights the need to develop efficient and high-throughput screening (HTS) tools. Bio-optical tools, such as laser-induced fluorescence (LIF) and pulse amplitude modulated (PAM) fluorometry, emerge as efficient non-invasive techniques for toxicophenomic evaluation in ecotoxicological trials. Both techniques generate large datasets that can be applied in multivariate analysis to evaluate canonical classification efficiency of the exposure types and levels to which photosynthetic organisms, such as diatoms, are subjected to. In the present work, marine diatom cultures were exposed to two trace elements known to have physiological roles and different toxicity ranges (Zn and Cu), and to two other trace elements without known metabolic functions and very different toxicological profiles (Cr and Hg). All the tested approaches were able to disentangle the control groups from the test groups. Moreover, the application of LIF raw-data showed that this technique had the higher classification efficiency, providing very good separation of the different doses applied of each trace element tested. Additionally, PAM chlorophyll fast induction kinetics raw data also produced good classification efficiencies and provided data that can be useful for interpreting the physiological shifts induced by trace element exposure. In sum, LIF and PAM techniques appear as completely non-invasive HTS techniques that, when applied together, produce a correct toxicophenomic classification and disentangle the physiological effects behind the observed phenomic changes. Therefore, they are worth to be included in future ecotoxicological assessment test protocols.ElsevierRepositório da Universidade de LisboaDuarte, BernardoGameiro, CarlaUtkin, Andrei BorissovitchMatos, Ana RitaCaçador, IsabelFonseca, VanessaCabrita, Maria Teresa2021-07-14T10:21:47Z20212021-01-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10451/48920engDuarte, B., Gameiro, C., Utkin, A. B., ... Fonseca, V. & Cabrita, M. T. (2021). A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom. Estuarine, Coastal and Shelf Science, 250, 107170. https://doi.org/10.1016/j.ecss.2021.1071700272-771410.1016/j.ecss.2021.107170metadata only accessinfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-11-08T16:52:31Zoai:repositorio.ul.pt:10451/48920Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T22:00:41.961875Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
title A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
spellingShingle A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
Duarte, Bernardo
Trace elements
Chlorophyll fluorescence
Ecotoxicology
High-throughput screening
title_short A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
title_full A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
title_fullStr A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
title_full_unstemmed A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
title_sort A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom
author Duarte, Bernardo
author_facet Duarte, Bernardo
Gameiro, Carla
Utkin, Andrei Borissovitch
Matos, Ana Rita
Caçador, Isabel
Fonseca, Vanessa
Cabrita, Maria Teresa
author_role author
author2 Gameiro, Carla
Utkin, Andrei Borissovitch
Matos, Ana Rita
Caçador, Isabel
Fonseca, Vanessa
Cabrita, Maria Teresa
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Repositório da Universidade de Lisboa
dc.contributor.author.fl_str_mv Duarte, Bernardo
Gameiro, Carla
Utkin, Andrei Borissovitch
Matos, Ana Rita
Caçador, Isabel
Fonseca, Vanessa
Cabrita, Maria Teresa
dc.subject.por.fl_str_mv Trace elements
Chlorophyll fluorescence
Ecotoxicology
High-throughput screening
topic Trace elements
Chlorophyll fluorescence
Ecotoxicology
High-throughput screening
description The increasing uncontrolled development of human activities and consequent increase in the production and release into the marine realm of potentially harmful substances highlights the need to develop efficient and high-throughput screening (HTS) tools. Bio-optical tools, such as laser-induced fluorescence (LIF) and pulse amplitude modulated (PAM) fluorometry, emerge as efficient non-invasive techniques for toxicophenomic evaluation in ecotoxicological trials. Both techniques generate large datasets that can be applied in multivariate analysis to evaluate canonical classification efficiency of the exposure types and levels to which photosynthetic organisms, such as diatoms, are subjected to. In the present work, marine diatom cultures were exposed to two trace elements known to have physiological roles and different toxicity ranges (Zn and Cu), and to two other trace elements without known metabolic functions and very different toxicological profiles (Cr and Hg). All the tested approaches were able to disentangle the control groups from the test groups. Moreover, the application of LIF raw-data showed that this technique had the higher classification efficiency, providing very good separation of the different doses applied of each trace element tested. Additionally, PAM chlorophyll fast induction kinetics raw data also produced good classification efficiencies and provided data that can be useful for interpreting the physiological shifts induced by trace element exposure. In sum, LIF and PAM techniques appear as completely non-invasive HTS techniques that, when applied together, produce a correct toxicophenomic classification and disentangle the physiological effects behind the observed phenomic changes. Therefore, they are worth to be included in future ecotoxicological assessment test protocols.
publishDate 2021
dc.date.none.fl_str_mv 2021-07-14T10:21:47Z
2021
2021-01-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10451/48920
url http://hdl.handle.net/10451/48920
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Duarte, B., Gameiro, C., Utkin, A. B., ... Fonseca, V. & Cabrita, M. T. (2021). A multivariate approach to chlorophyll a fluorescence data for trace element ecotoxicological trials using a model marine diatom. Estuarine, Coastal and Shelf Science, 250, 107170. https://doi.org/10.1016/j.ecss.2021.107170
0272-7714
10.1016/j.ecss.2021.107170
dc.rights.driver.fl_str_mv metadata only access
info:eu-repo/semantics/openAccess
rights_invalid_str_mv metadata only access
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Elsevier
publisher.none.fl_str_mv Elsevier
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron_str RCAAP
institution RCAAP
reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
repository.mail.fl_str_mv
_version_ 1799134555589836800